RNA–Protein interactions for RNA: ENST00000439308.6

TUBGCP6-204, Transcript of tubulin gamma complex associated protein 6, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP6, Length 6,078 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6-204ENST00000439308 DCAF8L2P0C7V8 631 aa29.28■■■□□ 2.28
TUBGCP6-204ENST00000439308 NISCHQ9Y2I1 1504 aa27.52■■■□□ 2
TUBGCP6-204ENST00000439308 SUPT5HO00267 1087 aaKnown RBP26.7■■□□□ 1.87
TUBGCP6-204ENST00000439308 FAM9AQ8IZU1 332 aaPredicted RBP26.57■■□□□ 1.84
TUBGCP6-204ENST00000439308 SHROOM4Q9ULL8 1493 aa26.41■■□□□ 1.82
TUBGCP6-204ENST00000439308 PELP1Q8IZL8 1130 aaKnown RBP26.35■■□□□ 1.81
TUBGCP6-204ENST00000439308 APLP2Q06481 763 aa25.97■■□□□ 1.75
TUBGCP6-204ENST00000439308 EHMT2Q96KQ7 1210 aa25.87■■□□□ 1.73
TUBGCP6-204ENST00000439308 MYT1Q01538 1121 aa25.46■■□□□ 1.67
TUBGCP6-204ENST00000439308 ERICH6Q7L0X2 663 aa25.32■■□□□ 1.64
TUBGCP6-204ENST00000439308 ATP1B4Q9UN42 357 aaPredicted RBP25.29■■□□□ 1.64
TUBGCP6-204ENST00000439308 RANGAP1P46060 587 aaPredicted RBP25.17■■□□□ 1.62
TUBGCP6-204ENST00000439308 CENPBP07199 599 aaPredicted RBP25.11■■□□□ 1.61
TUBGCP6-204ENST00000439308 CCER1Q8TC90 406 aaPredicted RBP25.1■■□□□ 1.61
TUBGCP6-204ENST00000439308 TRIM41Q8WV44 630 aa24.95■■□□□ 1.59
TUBGCP6-204ENST00000439308 MYT1LQ9UL68 1186 aa24.88■■□□□ 1.57
TUBGCP6-204ENST00000439308 TTBK1Q5TCY1 1321 aaPredicted RBP24.86■■□□□ 1.57
TUBGCP6-204ENST00000439308 UBTFP17480 764 aaKnown RBP24.85■■□□□ 1.57
TUBGCP6-204ENST00000439308 ZEB1P37275 1124 aaPredicted RBP24.81■■□□□ 1.56
TUBGCP6-204ENST00000439308 PCGF6Q9BYE7 350 aa24.79■■□□□ 1.56
TUBGCP6-204ENST00000439308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.69■■□□□ 1.54
TUBGCP6-204ENST00000439308 HNRNPUL2Q1KMD3 747 aaKnown RBP24.69■■□□□ 1.54
TUBGCP6-204ENST00000439308 ABCC9O60706 1549 aa24.66■■□□□ 1.54
TUBGCP6-204ENST00000439308 NEFLP07196 543 aa24.44■■□□□ 1.5
TUBGCP6-204ENST00000439308 PABPN1Q86U42 306 aaKnown RBP eCLIP24.43■■□□□ 1.51e-6■■■□□ 16
TUBGCP6-204ENST00000439308 YTHDC1Q96MU7 727 aaKnown RBP24.28■■□□□ 1.48
TUBGCP6-204ENST00000439308 CHIC1Q5VXU3 224 aa24.11■■□□□ 1.45
TUBGCP6-204ENST00000439308 FBLN2P98095 1184 aa24.04■■□□□ 1.44
TUBGCP6-204ENST00000439308 DAXXQ9UER7 740 aaPredicted RBP23.89■■□□□ 1.41
TUBGCP6-204ENST00000439308 ITGAEP38570 1179 aa23.86■■□□□ 1.41
TUBGCP6-204ENST00000439308 HRCP23327 699 aa23.78■■□□□ 1.4
TUBGCP6-204ENST00000439308 SLC4A1APQ9BWU0 796 aaKnown RBP23.75■■□□□ 1.39
TUBGCP6-204ENST00000439308 POLR3GLQ9BT43 218 aa23.73■■□□□ 1.39
TUBGCP6-204ENST00000439308 TRIM26Q12899 539 aaPredicted RBP23.67■■□□□ 1.38
TUBGCP6-204ENST00000439308 PPARGC1BQ86YN6 1023 aaKnown RBP23.6■■□□□ 1.37
TUBGCP6-204ENST00000439308 NPM1P06748 294 aaKnown RBP eCLIP23.58■■□□□ 1.36
TUBGCP6-204ENST00000439308 RTL5Q5HYW3 569 aaPredicted RBP23.56■■□□□ 1.36
TUBGCP6-204ENST00000439308 ESF1Q9H501 851 aaKnown RBP23.55■■□□□ 1.36
TUBGCP6-204ENST00000439308 BCANQ96GW7 911 aa23.51■■□□□ 1.35
TUBGCP6-204ENST00000439308 FAM50AQ14320 339 aaKnown RBP23.45■■□□□ 1.34
TUBGCP6-204ENST00000439308 TRIM52Q96A61 297 aa23.42■■□□□ 1.34
TUBGCP6-204ENST00000439308 ZNF316A6NFI3 1004 aaPredicted RBP23.37■■□□□ 1.33
TUBGCP6-204ENST00000439308 CDK11AQ9UQ88 783 aaPredicted RBP23.29■■□□□ 1.32
TUBGCP6-204ENST00000439308 SCRIBQ14160 1630 aa23.25■■□□□ 1.31
TUBGCP6-204ENST00000439308 CNGB1Q14028 1251 aaPredicted RBP23.2■■□□□ 1.3
TUBGCP6-204ENST00000439308 PLPPR3Q6T4P5 718 aa23.15■■□□□ 1.3
TUBGCP6-204ENST00000439308 DIEXFQ68CQ4 756 aaKnown RBP23.15■■□□□ 1.3
TUBGCP6-204ENST00000439308 ARID3CA6NKF2 412 aa23.14■■□□□ 1.29
TUBGCP6-204ENST00000439308 STAG3Q9UJ98 1225 aa23.13■■□□□ 1.29
TUBGCP6-204ENST00000439308 ZNF777Q9ULD5 760 aaPredicted RBP23.09■■□□□ 1.29
TUBGCP6-204ENST00000439308 P3H3Q8IVL6 736 aa23.07■■□□□ 1.28
TUBGCP6-204ENST00000439308 RB1CC1Q8TDY2 1594 aa23.06■■□□□ 1.28
TUBGCP6-204ENST00000439308 LOC105371045A0A1W2PR82 267 aa23.03■■□□□ 1.28
TUBGCP6-204ENST00000439308 GTF3C3Q9Y5Q9 886 aa23.02■■□□□ 1.28
TUBGCP6-204ENST00000439308 CHMP7Q8WUX9 453 aaPredicted RBP23.02■■□□□ 1.27
TUBGCP6-204ENST00000439308 CLSPNQ9HAW4 1339 aa23.01■■□□□ 1.27
TUBGCP6-204ENST00000439308 ZNF326Q5BKZ1 582 aaKnown RBP22.99■■□□□ 1.27
TUBGCP6-204ENST00000439308 SLC24A1O60721 1099 aa22.98■■□□□ 1.27
TUBGCP6-204ENST00000439308 NEFMP07197 916 aa22.96■■□□□ 1.27
TUBGCP6-204ENST00000439308 CCDC180Q9P1Z9 1646 aa22.91■■□□□ 1.26
TUBGCP6-204ENST00000439308 CHGAP10645 457 aaKnown RBP22.86■■□□□ 1.25
TUBGCP6-204ENST00000439308 NEUROD1Q13562 356 aa22.85■■□□□ 1.25
TUBGCP6-204ENST00000439308 ERCC6Q03468 1493 aa22.82■■□□□ 1.24
TUBGCP6-204ENST00000439308 CSRNP3Q8WYN3 585 aa22.81■■□□□ 1.24
TUBGCP6-204ENST00000439308 ZBTB47Q9UFB7 747 aaPredicted RBP22.79■■□□□ 1.24
TUBGCP6-204ENST00000439308 ACIN1Q9UKV3 1341 aaKnown RBP22.64■■□□□ 1.22
TUBGCP6-204ENST00000439308 ARID4BQ4LE39 1312 aaPredicted RBP22.63■■□□□ 1.21
TUBGCP6-204ENST00000439308 TRHP20396 242 aaPredicted RBP22.62■■□□□ 1.21
TUBGCP6-204ENST00000439308 NACADO15069 1562 aa22.61■■□□□ 1.21
TUBGCP6-204ENST00000439308 ZCCHC6Q5VYS8 1495 aaKnown RBP22.59■■□□□ 1.21
TUBGCP6-204ENST00000439308 GLIPR1L2Q4G1C9 344 aa22.59■■□□□ 1.21
TUBGCP6-204ENST00000439308 TSPY4P0CV99 314 aa22.58■■□□□ 1.21
TUBGCP6-204ENST00000439308 TSPY10P0CW01 314 aa22.58■■□□□ 1.21
TUBGCP6-204ENST00000439308 ANP32AP39687 249 aaKnown RBP22.58■■□□□ 1.2
TUBGCP6-204ENST00000439308 SCAF1Q9H7N4 1312 aaKnown RBP22.57■■□□□ 1.2
TUBGCP6-204ENST00000439308 ANP32CO43423 234 aa22.57■■□□□ 1.2
TUBGCP6-204ENST00000439308 EIF5BO60841 1220 aaKnown RBP22.55■■□□□ 1.2
TUBGCP6-204ENST00000439308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.53■■□□□ 1.25e-7■■■□□ 15.9
TUBGCP6-204ENST00000439308 KCNH8Q96L42 1107 aa22.51■■□□□ 1.19
TUBGCP6-204ENST00000439308 C14orf37Q86TY3 774 aa22.5■■□□□ 1.19
TUBGCP6-204ENST00000439308 PPP1R15AO75807 674 aaPredicted RBP22.48■■□□□ 1.19
TUBGCP6-204ENST00000439308 CANXP27824 592 aaKnown RBP22.47■■□□□ 1.19
TUBGCP6-204ENST00000439308 BAZ1BQ9UIG0 1483 aaKnown RBP22.44■■□□□ 1.18
TUBGCP6-204ENST00000439308 PLEKHD1A6NEE1 506 aa22.44■■□□□ 1.18
TUBGCP6-204ENST00000439308 A0A0G2JS52 829 aa22.38■■□□□ 1.17
TUBGCP6-204ENST00000439308 HAP1P54257 671 aaPredicted RBP22.37■■□□□ 1.17
TUBGCP6-204ENST00000439308 MTUS2Q5JR59 1369 aa22.34■■□□□ 1.17
TUBGCP6-204ENST00000439308 ANP32BQ92688 251 aaKnown RBP22.33■■□□□ 1.16
TUBGCP6-204ENST00000439308 NPM2Q86SE8 214 aaKnown RBP22.31■■□□□ 1.16
TUBGCP6-204ENST00000439308 CHIC2Q9UKJ5 165 aa22.25■■□□□ 1.15
TUBGCP6-204ENST00000439308 BCL11AQ9H165 835 aa22.25■■□□□ 1.15
TUBGCP6-204ENST00000439308 ZBTB7CA1YPR0 619 aa22.21■■□□□ 1.15
TUBGCP6-204ENST00000439308 TONSLQ96HA7 1378 aa22.19■■□□□ 1.14
TUBGCP6-204ENST00000439308 RSF1Q96T23 1441 aaPredicted RBP22.17■■□□□ 1.14
TUBGCP6-204ENST00000439308 FKBP8Q14318 412 aa22.16■■□□□ 1.14
TUBGCP6-204ENST00000439308 PLEKHG5O94827 1062 aa22.11■■□□□ 1.13
TUBGCP6-204ENST00000439308 NBR1Q14596 966 aa22.05■■□□□ 1.12
TUBGCP6-204ENST00000439308 KIF27Q86VH2 1401 aa22.05■■□□□ 1.12
TUBGCP6-204ENST00000439308 PDS5BQ9NTI5 1447 aa22.04■■□□□ 1.12
TUBGCP6-204ENST00000439308 KDM2AQ9Y2K7 1162 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms