RNA–Protein interactions for RNA: ENST00000264867.6

PPARGC1A-201, Transcript of PPARG coactivator 1 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPARGC1A, Length 6,318 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-201ENST00000264867 DCAF8L2P0C7V8 631 aa9.3□□□□□ -0.92
PPARGC1A-201ENST00000264867 SUPT5HO00267 1087 aaKnown RBP8.98□□□□□ -0.97
PPARGC1A-201ENST00000264867 PELP1Q8IZL8 1130 aaKnown RBP8.94□□□□□ -0.98
PPARGC1A-201ENST00000264867 EHMT2Q96KQ7 1210 aa8.87□□□□□ -0.99
PPARGC1A-201ENST00000264867 SHROOM4Q9ULL8 1493 aa8.75□□□□□ -1.01
PPARGC1A-201ENST00000264867 ERICH6Q7L0X2 663 aa8.67□□□□□ -1.02
PPARGC1A-201ENST00000264867 TTBK1Q5TCY1 1321 aaPredicted RBP8.6□□□□□ -1.03
PPARGC1A-201ENST00000264867 PCGF6Q9BYE7 350 aa8.6□□□□□ -1.03
PPARGC1A-201ENST00000264867 APLP2Q06481 763 aa8.59□□□□□ -1.03
PPARGC1A-201ENST00000264867 CENPBP07199 599 aaPredicted RBP8.57□□□□□ -1.04
PPARGC1A-201ENST00000264867 CCER1Q8TC90 406 aaPredicted RBP8.53□□□□□ -1.04
PPARGC1A-201ENST00000264867 FAM9AQ8IZU1 332 aaPredicted RBP8.52□□□□□ -1.05
PPARGC1A-201ENST00000264867 MYT1Q01538 1121 aa8.47□□□□□ -1.05
PPARGC1A-201ENST00000264867 YTHDC1Q96MU7 727 aaKnown RBP8.45□□□□□ -1.06
PPARGC1A-201ENST00000264867 ZEB1P37275 1124 aaPredicted RBP8.43□□□□□ -1.06
PPARGC1A-201ENST00000264867 NISCHQ9Y2I1 1504 aa8.42□□□□□ -1.06
PPARGC1A-201ENST00000264867 RANGAP1P46060 587 aaPredicted RBP8.39□□□□□ -1.07
PPARGC1A-201ENST00000264867 NEFLP07196 543 aa8.38□□□□□ -1.07
PPARGC1A-201ENST00000264867 ATP1B4Q9UN42 357 aaPredicted RBP8.28□□□□□ -1.08
PPARGC1A-201ENST00000264867 TRIM41Q8WV44 630 aa8.25□□□□□ -1.09
PPARGC1A-201ENST00000264867 PPARGC1BQ86YN6 1023 aaKnown RBP8.22□□□□□ -1.09
PPARGC1A-201ENST00000264867 DAXXQ9UER7 740 aaPredicted RBP8.19□□□□□ -1.1
PPARGC1A-201ENST00000264867 UBTFP17480 764 aaKnown RBP8.19□□□□□ -1.1
PPARGC1A-201ENST00000264867 HRCP23327 699 aa8.14□□□□□ -1.11
PPARGC1A-201ENST00000264867 TRIM26Q12899 539 aaPredicted RBP8.12□□□□□ -1.11
PPARGC1A-201ENST00000264867 POLR3GLQ9BT43 218 aa8.1□□□□□ -1.11
PPARGC1A-201ENST00000264867 CNGB1Q14028 1251 aaPredicted RBP8.06□□□□□ -1.12
PPARGC1A-201ENST00000264867 RTL5Q5HYW3 569 aaPredicted RBP8.05□□□□□ -1.12
PPARGC1A-201ENST00000264867 ITGAEP38570 1179 aa8.05□□□□□ -1.12
PPARGC1A-201ENST00000264867 ZNF316A6NFI3 1004 aaPredicted RBP8.02□□□□□ -1.13
PPARGC1A-201ENST00000264867 HNRNPUL2Q1KMD3 747 aaKnown RBP7.99□□□□□ -1.13
PPARGC1A-201ENST00000264867 DIEXFQ68CQ4 756 aaKnown RBP7.97□□□□□ -1.13
PPARGC1A-201ENST00000264867 LOC105371045A0A1W2PR82 267 aa7.96□□□□□ -1.13
PPARGC1A-201ENST00000264867 BCANQ96GW7 911 aa7.96□□□□□ -1.14
PPARGC1A-201ENST00000264867 CLSPNQ9HAW4 1339 aa7.96□□□□□ -1.14
PPARGC1A-201ENST00000264867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.94□□□□□ -1.14
PPARGC1A-201ENST00000264867 MYT1LQ9UL68 1186 aa7.93□□□□□ -1.14
PPARGC1A-201ENST00000264867 GTF3C3Q9Y5Q9 886 aa7.93□□□□□ -1.14
PPARGC1A-201ENST00000264867 SLC4A1APQ9BWU0 796 aaKnown RBP7.9□□□□□ -1.14
PPARGC1A-201ENST00000264867 CHIC1Q5VXU3 224 aa7.87□□□□□ -1.15
PPARGC1A-201ENST00000264867 CDK11AQ9UQ88 783 aaPredicted RBP7.84□□□□□ -1.15
PPARGC1A-201ENST00000264867 NEUROD1Q13562 356 aa7.8□□□□□ -1.16
PPARGC1A-201ENST00000264867 FAM50AQ14320 339 aaKnown RBP7.78□□□□□ -1.16
PPARGC1A-201ENST00000264867 ANP32CO43423 234 aa7.76□□□□□ -1.17
PPARGC1A-201ENST00000264867 EIF5BO60841 1220 aaKnown RBP7.76□□□□□ -1.17
PPARGC1A-201ENST00000264867 TRIM52Q96A61 297 aa7.76□□□□□ -1.17
PPARGC1A-201ENST00000264867 BCL11AQ9H165 835 aa7.75□□□□□ -1.17
PPARGC1A-201ENST00000264867 ACIN1Q9UKV3 1341 aaKnown RBP7.75□□□□□ -1.17
PPARGC1A-201ENST00000264867 NPM2Q86SE8 214 aaKnown RBP7.74□□□□□ -1.17
PPARGC1A-201ENST00000264867 ANP32AP39687 249 aaKnown RBP7.72□□□□□ -1.17
PPARGC1A-201ENST00000264867 ZBTB47Q9UFB7 747 aaPredicted RBP7.72□□□□□ -1.17
PPARGC1A-201ENST00000264867 ZNF326Q5BKZ1 582 aaKnown RBP7.72□□□□□ -1.17
PPARGC1A-201ENST00000264867 CANXP27824 592 aaKnown RBP7.71□□□□□ -1.17
PPARGC1A-201ENST00000264867 SLC24A1O60721 1099 aa7.65□□□□□ -1.18
PPARGC1A-201ENST00000264867 FKBP8Q14318 412 aa7.65□□□□□ -1.19
PPARGC1A-201ENST00000264867 NBR1Q14596 966 aa7.62□□□□□ -1.19
PPARGC1A-201ENST00000264867 GLIPR1L2Q4G1C9 344 aa7.62□□□□□ -1.19
PPARGC1A-201ENST00000264867 ANP32BQ92688 251 aaKnown RBP7.62□□□□□ -1.19
PPARGC1A-201ENST00000264867 ARXQ96QS3 562 aa7.59□□□□□ -1.19
PPARGC1A-201ENST00000264867 HSP90AA1P07900 732 aaKnown RBP7.58□□□□□ -1.2
PPARGC1A-201ENST00000264867 NEFMP07197 916 aa7.56□□□□□ -1.2
PPARGC1A-201ENST00000264867 HNRNPUQ00839 825 aaKnown RBP eCLIP7.54□□□□□ -1.2
PPARGC1A-201ENST00000264867 UPF2Q9HAU5 1272 aaKnown RBP7.53□□□□□ -1.2
PPARGC1A-201ENST00000264867 SCAF1Q9H7N4 1312 aaKnown RBP7.53□□□□□ -1.2
PPARGC1A-201ENST00000264867 FAM9BQ8IZU0 186 aa7.53□□□□□ -1.2
PPARGC1A-201ENST00000264867 SALL2Q9Y467 1007 aaPredicted RBP7.51□□□□□ -1.21
PPARGC1A-201ENST00000264867 ARID3CA6NKF2 412 aa7.5□□□□□ -1.21
PPARGC1A-201ENST00000264867 CCDC136Q96JN2 1154 aa7.49□□□□□ -1.21
PPARGC1A-201ENST00000264867 IRX6P78412 446 aaPredicted RBP7.49□□□□□ -1.21
PPARGC1A-201ENST00000264867 DDX10Q13206 875 aaKnown RBP7.49□□□□□ -1.21
PPARGC1A-201ENST00000264867 P3H3Q8IVL6 736 aa7.49□□□□□ -1.21
PPARGC1A-201ENST00000264867 ZNF777Q9ULD5 760 aaPredicted RBP7.45□□□□□ -1.22
PPARGC1A-201ENST00000264867 TONSLQ96HA7 1378 aa7.45□□□□□ -1.22
PPARGC1A-201ENST00000264867 FBLN2P98095 1184 aa7.44□□□□□ -1.22
PPARGC1A-201ENST00000264867 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.42□□□□□ -1.22
PPARGC1A-201ENST00000264867 MIER1Q8N108 512 aa7.42□□□□□ -1.22
PPARGC1A-201ENST00000264867 ANP32EQ9BTT0 268 aa7.41□□□□□ -1.22
PPARGC1A-201ENST00000264867 PABPN1Q86U42 306 aaKnown RBP eCLIP7.41□□□□□ -1.22
PPARGC1A-201ENST00000264867 TMC1Q8TDI8 760 aa7.4□□□□□ -1.22
PPARGC1A-201ENST00000264867 RTN4Q9NQC3 1192 aaKnown RBP7.4□□□□□ -1.22
PPARGC1A-201ENST00000264867 TRIM44Q96DX7 344 aaPredicted RBP7.4□□□□□ -1.23
PPARGC1A-201ENST00000264867 MRS2Q9HD23 443 aa7.39□□□□□ -1.23
PPARGC1A-201ENST00000264867 CHGAP10645 457 aaKnown RBP7.38□□□□□ -1.23
PPARGC1A-201ENST00000264867 WDR43Q15061 677 aaKnown RBP eCLIP7.38□□□□□ -1.23
PPARGC1A-201ENST00000264867 DDRGK1Q96HY6 314 aa7.38□□□□□ -1.23
PPARGC1A-201ENST00000264867 CSRNP3Q8WYN3 585 aa7.37□□□□□ -1.23
PPARGC1A-201ENST00000264867 HIRIP3Q9BW71 556 aaPredicted RBP7.37□□□□□ -1.23
PPARGC1A-201ENST00000264867 DCAF1Q9Y4B6 1507 aa7.36□□□□□ -1.23
PPARGC1A-201ENST00000264867 NCLP19338 710 aaKnown RBP7.36□□□□□ -1.23
PPARGC1A-201ENST00000264867 BECN1Q14457 450 aa7.36□□□□□ -1.23
PPARGC1A-201ENST00000264867 NAP1L5Q96NT1 182 aaPredicted RBP7.35□□□□□ -1.23
PPARGC1A-201ENST00000264867 TNNT2P45379 298 aaPredicted RBP7.35□□□□□ -1.23
PPARGC1A-201ENST00000264867 TPRNQ4KMQ1 711 aa7.34□□□□□ -1.23
PPARGC1A-201ENST00000264867 LAS1LQ9Y4W2 734 aaKnown RBP7.34□□□□□ -1.24
PPARGC1A-201ENST00000264867 SENP3-EIF4A1A0A087X0R7 540 aa7.33□□□□□ -1.24
PPARGC1A-201ENST00000264867 MYH16Q9H6N6 1097 aa7.33□□□□□ -1.24
PPARGC1A-201ENST00000264867 CHIC2Q9UKJ5 165 aa7.33□□□□□ -1.24
PPARGC1A-201ENST00000264867 PTMAP06454 111 aaKnown RBP7.33□□□□□ -1.24
PPARGC1A-201ENST00000264867 CDK11BP21127 795 aaKnown RBP7.33□□□□□ -1.24
PPARGC1A-201ENST00000264867 DNTTIP2Q5QJE6 756 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms