RNA–Protein interactions for RNA: ENST00000523676.5

TOP1MT-218, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 5 BASIC

Gene TOP1MT, Length 1,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-218ENST00000523676 NISCHQ9Y2I1 1504 aa42.48■■■■■ 4.39
TOP1MT-218ENST00000523676 CCDC180Q9P1Z9 1646 aa37.35■■■■□ 3.57
TOP1MT-218ENST00000523676 ABCC9O60706 1549 aa36.02■■■■□ 3.36
TOP1MT-218ENST00000523676 ZCCHC6Q5VYS8 1495 aaKnown RBP35.54■■■■□ 3.28
TOP1MT-218ENST00000523676 DCAF8L2P0C7V8 631 aa35.38■■■■□ 3.25
TOP1MT-218ENST00000523676 DCAF1Q9Y4B6 1507 aa35.07■■■■□ 3.2
TOP1MT-218ENST00000523676 NACADO15069 1562 aa34.94■■■■□ 3.18
TOP1MT-218ENST00000523676 MYO15BQ96JP2 1530 aa34.9■■■■□ 3.18
TOP1MT-218ENST00000523676 RB1CC1Q8TDY2 1594 aa34.83■■■■□ 3.17
TOP1MT-218ENST00000523676 SCRIBQ14160 1630 aa34.32■■■■□ 3.08
TOP1MT-218ENST00000523676 SHROOM4Q9ULL8 1493 aa34.24■■■■□ 3.07
TOP1MT-218ENST00000523676 UNC13AQ9UPW8 1703 aa34.16■■■■□ 3.06
TOP1MT-218ENST00000523676 PABPN1Q86U42 306 aaKnown RBP eCLIP33.83■■■■□ 3.01
TOP1MT-218ENST00000523676 BICRAQ9NZM4 1560 aa33.82■■■■□ 3
TOP1MT-218ENST00000523676 CECR2Q9BXF3 1484 aa33.1■■■□□ 2.89
TOP1MT-218ENST00000523676 EIF4G1Q04637 1599 aaKnown RBP32.86■■■□□ 2.85
TOP1MT-218ENST00000523676 BAZ1AQ9NRL2 1556 aaPredicted RBP32.85■■■□□ 2.85
TOP1MT-218ENST00000523676 MROH2BQ7Z745 1585 aa32.82■■■□□ 2.84
TOP1MT-218ENST00000523676 SMARCA4P51532 1647 aa32.81■■■□□ 2.84
TOP1MT-218ENST00000523676 RSF1Q96T23 1441 aaPredicted RBP32.69■■■□□ 2.82
TOP1MT-218ENST00000523676 SUPT5HO00267 1087 aaKnown RBP32.58■■■□□ 2.81
TOP1MT-218ENST00000523676 CC2D2AQ9P2K1 1620 aa32.55■■■□□ 2.8
TOP1MT-218ENST00000523676 WIZO95785 1651 aa32.53■■■□□ 2.8
TOP1MT-218ENST00000523676 ATAD2BQ9ULI0 1458 aa32.44■■■□□ 2.78
TOP1MT-218ENST00000523676 DNAJC5BQ9UF47 199 aa32.41■■■□□ 2.78
TOP1MT-218ENST00000523676 PEG3Q9GZU2 1588 aa32.41■■■□□ 2.78
TOP1MT-218ENST00000523676 SMARCA2P51531 1590 aa32.39■■■□□ 2.77
TOP1MT-218ENST00000523676 NCAPD3P42695 1498 aa32.25■■■□□ 2.75
TOP1MT-218ENST00000523676 BAZ1BQ9UIG0 1483 aaKnown RBP32.23■■■□□ 2.75
TOP1MT-218ENST00000523676 HMGXB3Q12766 1538 aa32.16■■■□□ 2.74
TOP1MT-218ENST00000523676 TOP2AP11388 1531 aaKnown RBP32.13■■■□□ 2.73
TOP1MT-218ENST00000523676 CCDC88BA6NC98 1476 aa31.8■■■□□ 2.68
TOP1MT-218ENST00000523676 NESP48681 1621 aa31.41■■■□□ 2.62
TOP1MT-218ENST00000523676 CADPSQ9ULU8 1353 aa31.39■■■□□ 2.62
TOP1MT-218ENST00000523676 CFTRP13569 1480 aa31.36■■■□□ 2.61
TOP1MT-218ENST00000523676 LAMC3Q9Y6N6 1575 aa31.28■■■□□ 2.6
TOP1MT-218ENST00000523676 PRDM2Q13029 1718 aa31.17■■■□□ 2.58
TOP1MT-218ENST00000523676 FANCD2Q9BXW9 1451 aa31.07■■■□□ 2.56
TOP1MT-218ENST00000523676 PDS5BQ9NTI5 1447 aa31.06■■■□□ 2.56
TOP1MT-218ENST00000523676 KIF21AQ7Z4S6 1674 aa31.02■■■□□ 2.56
TOP1MT-218ENST00000523676 ABCC8Q09428 1581 aa30.95■■■□□ 2.55
TOP1MT-218ENST00000523676 CEP164Q9UPV0 1460 aa30.94■■■□□ 2.54
TOP1MT-218ENST00000523676 ERCC6Q03468 1493 aa30.93■■■□□ 2.54
TOP1MT-218ENST00000523676 WRNQ14191 1432 aaPredicted RBP eCLIP30.79■■■□□ 2.52
TOP1MT-218ENST00000523676 CHIC1Q5VXU3 224 aa30.77■■■□□ 2.52
TOP1MT-218ENST00000523676 CUX1P39880 1505 aa30.73■■■□□ 2.51
TOP1MT-218ENST00000523676 URB2Q14146 1524 aaKnown RBP30.73■■■□□ 2.51
TOP1MT-218ENST00000523676 SYNJ1O43426 1573 aa30.72■■■□□ 2.51
TOP1MT-218ENST00000523676 MRC2Q9UBG0 1479 aa30.71■■■□□ 2.51
TOP1MT-218ENST00000523676 THOC2Q8NI27 1593 aaKnown RBP30.67■■■□□ 2.5
TOP1MT-218ENST00000523676 TOPBP1Q92547 1522 aa30.65■■■□□ 2.5
TOP1MT-218ENST00000523676 DNMBPQ6XZF7 1577 aa30.65■■■□□ 2.5
TOP1MT-218ENST00000523676 TRIM41Q8WV44 630 aa30.65■■■□□ 2.5
TOP1MT-218ENST00000523676 TOP2BQ02880 1626 aa30.62■■■□□ 2.49
TOP1MT-218ENST00000523676 BIVM-ERCC5R4GMW8 1640 aa30.59■■■□□ 2.49
TOP1MT-218ENST00000523676 WDR62O43379 1518 aa30.58■■■□□ 2.49
TOP1MT-218ENST00000523676 FGD5Q6ZNL6 1462 aa30.5■■■□□ 2.47
TOP1MT-218ENST00000523676 POLA1P09884 1462 aaPredicted RBP30.46■■■□□ 2.47
TOP1MT-218ENST00000523676 RAD54L2Q9Y4B4 1467 aa30.37■■■□□ 2.45
TOP1MT-218ENST00000523676 CUX2O14529 1486 aa30.35■■■□□ 2.45
TOP1MT-218ENST00000523676 SOGA1O94964 1423 aa30.34■■■□□ 2.45
TOP1MT-218ENST00000523676 TARBP1Q13395 1621 aaKnown RBP30.25■■■□□ 2.43
TOP1MT-218ENST00000523676 IFT140Q96RY7 1462 aa30.21■■■□□ 2.43
TOP1MT-218ENST00000523676 ABCA10Q8WWZ4 1543 aa30.18■■■□□ 2.42
TOP1MT-218ENST00000523676 WDR97A6NE52 1622 aa30.17■■■□□ 2.42
TOP1MT-218ENST00000523676 RUSC2Q8N2Y8 1516 aa30.16■■■□□ 2.42
TOP1MT-218ENST00000523676 ZNF608Q9ULD9 1512 aaPredicted RBP30.14■■■□□ 2.42
TOP1MT-218ENST00000523676 TDRD9Q8NDG6 1382 aaKnown RBP30.13■■■□□ 2.41
TOP1MT-218ENST00000523676 FAM9AQ8IZU1 332 aaPredicted RBP30.12■■■□□ 2.41
TOP1MT-218ENST00000523676 AQRO60306 1485 aaKnown RBP eCLIP30.07■■■□□ 2.45e-15■■■■■ 69.3
TOP1MT-218ENST00000523676 KIF27Q86VH2 1401 aa30.06■■■□□ 2.4
TOP1MT-218ENST00000523676 ABCA5Q8WWZ7 1642 aa30.02■■■□□ 2.4
TOP1MT-218ENST00000523676 EIF4G3O43432 1585 aaKnown RBP30.01■■■□□ 2.39
TOP1MT-218ENST00000523676 GAPVD1Q14C86 1478 aa29.99■■■□□ 2.39
TOP1MT-218ENST00000523676 EEA1Q15075 1411 aa29.91■■■□□ 2.38
TOP1MT-218ENST00000523676 PBRM1Q86U86 1689 aa29.89■■■□□ 2.38
TOP1MT-218ENST00000523676 IGF1RP08069 1367 aa29.87■■■□□ 2.37
TOP1MT-218ENST00000523676 CSRNP3Q8WYN3 585 aa29.87■■■□□ 2.37
TOP1MT-218ENST00000523676 GRIN2BQ13224 1484 aa29.85■■■□□ 2.37
TOP1MT-218ENST00000523676 ERICH3Q5RHP9 1530 aa29.82■■■□□ 2.36
TOP1MT-218ENST00000523676 EHMT2Q96KQ7 1210 aa29.77■■■□□ 2.36
TOP1MT-218ENST00000523676 SNAPC4Q5SXM2 1469 aa29.77■■■□□ 2.36
TOP1MT-218ENST00000523676 CARMIL1Q5VZK9 1371 aa29.72■■■□□ 2.35
TOP1MT-218ENST00000523676 CUL7Q14999 1698 aa29.7■■■□□ 2.34
TOP1MT-218ENST00000523676 PRXQ9BXM0 1461 aa29.68■■■□□ 2.34
TOP1MT-218ENST00000523676 ADAMTS12P58397 1594 aa29.68■■■□□ 2.34
TOP1MT-218ENST00000523676 MAGI1Q96QZ7 1491 aaPredicted RBP29.67■■■□□ 2.34
TOP1MT-218ENST00000523676 FHAD1B1AJZ9 1412 aa29.64■■■□□ 2.34
TOP1MT-218ENST00000523676 RAPGEF2Q9Y4G8 1499 aa29.63■■■□□ 2.33
TOP1MT-218ENST00000523676 LOC105371045A0A1W2PR82 267 aa29.61■■■□□ 2.33
TOP1MT-218ENST00000523676 KIF21BO75037 1637 aa29.61■■■□□ 2.33
TOP1MT-218ENST00000523676 FBLN2P98095 1184 aa29.61■■■□□ 2.33
TOP1MT-218ENST00000523676 SYNJ2O15056 1496 aa29.58■■■□□ 2.33
TOP1MT-218ENST00000523676 CHMP7Q8WUX9 453 aaPredicted RBP29.56■■■□□ 2.32
TOP1MT-218ENST00000523676 GOLGA3Q08378 1498 aa29.51■■■□□ 2.32
TOP1MT-218ENST00000523676 CHD1O14646 1710 aa29.5■■■□□ 2.31
TOP1MT-218ENST00000523676 GRIN2AQ12879 1464 aa29.5■■■□□ 2.31
TOP1MT-218ENST00000523676 UBTFP17480 764 aaKnown RBP29.46■■■□□ 2.31
TOP1MT-218ENST00000523676 CEP170Q5SW79 1584 aa29.35■■■□□ 2.29
TOP1MT-218ENST00000523676 NUP160Q12769 1436 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms