RNA–Protein interactions for RNA: ENST00000521193.5

TOP1MT-213, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2 BASIC

Gene TOP1MT, Length 1,960 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-213ENST00000521193 NISCHQ9Y2I1 1504 aa30.13■■■□□ 2.41
TOP1MT-213ENST00000521193 CCDC180Q9P1Z9 1646 aa26.45■■□□□ 1.82
TOP1MT-213ENST00000521193 ABCC9O60706 1549 aa25.64■■□□□ 1.7
TOP1MT-213ENST00000521193 ZCCHC6Q5VYS8 1495 aaKnown RBP25.2■■□□□ 1.62
TOP1MT-213ENST00000521193 DCAF8L2P0C7V8 631 aa25.14■■□□□ 1.61
TOP1MT-213ENST00000521193 DCAF1Q9Y4B6 1507 aa24.82■■□□□ 1.56
TOP1MT-213ENST00000521193 NACADO15069 1562 aa24.77■■□□□ 1.56
TOP1MT-213ENST00000521193 MYO15BQ96JP2 1530 aa24.71■■□□□ 1.55
TOP1MT-213ENST00000521193 RB1CC1Q8TDY2 1594 aa24.7■■□□□ 1.54
TOP1MT-213ENST00000521193 SCRIBQ14160 1630 aa24.37■■□□□ 1.49
TOP1MT-213ENST00000521193 SHROOM4Q9ULL8 1493 aa24.33■■□□□ 1.49
TOP1MT-213ENST00000521193 UNC13AQ9UPW8 1703 aa24.25■■□□□ 1.47
TOP1MT-213ENST00000521193 PABPN1Q86U42 306 aaKnown RBP eCLIP24.12■■□□□ 1.45
TOP1MT-213ENST00000521193 BICRAQ9NZM4 1560 aa24.06■■□□□ 1.44
TOP1MT-213ENST00000521193 CECR2Q9BXF3 1484 aa23.54■■□□□ 1.36
TOP1MT-213ENST00000521193 EIF4G1Q04637 1599 aaKnown RBP23.35■■□□□ 1.33
TOP1MT-213ENST00000521193 MROH2BQ7Z745 1585 aa23.31■■□□□ 1.32
TOP1MT-213ENST00000521193 SUPT5HO00267 1087 aaKnown RBP23.31■■□□□ 1.32
TOP1MT-213ENST00000521193 SMARCA4P51532 1647 aa23.27■■□□□ 1.32
TOP1MT-213ENST00000521193 BAZ1AQ9NRL2 1556 aaPredicted RBP23.27■■□□□ 1.32
TOP1MT-213ENST00000521193 RSF1Q96T23 1441 aaPredicted RBP23.2■■□□□ 1.3
TOP1MT-213ENST00000521193 DNAJC5BQ9UF47 199 aa23.2■■□□□ 1.3
TOP1MT-213ENST00000521193 CC2D2AQ9P2K1 1620 aa23.15■■□□□ 1.3
TOP1MT-213ENST00000521193 WIZO95785 1651 aa23.09■■□□□ 1.29
TOP1MT-213ENST00000521193 ATAD2BQ9ULI0 1458 aa23.04■■□□□ 1.28
TOP1MT-213ENST00000521193 PEG3Q9GZU2 1588 aa22.97■■□□□ 1.27
TOP1MT-213ENST00000521193 SMARCA2P51531 1590 aa22.95■■□□□ 1.26
TOP1MT-213ENST00000521193 NCAPD3P42695 1498 aa22.9■■□□□ 1.26
TOP1MT-213ENST00000521193 BAZ1BQ9UIG0 1483 aaKnown RBP22.86■■□□□ 1.25
TOP1MT-213ENST00000521193 HMGXB3Q12766 1538 aa22.8■■□□□ 1.24
TOP1MT-213ENST00000521193 TOP2AP11388 1531 aaKnown RBP22.77■■□□□ 1.24
TOP1MT-213ENST00000521193 CCDC88BA6NC98 1476 aa22.58■■□□□ 1.2
TOP1MT-213ENST00000521193 NESP48681 1621 aa22.37■■□□□ 1.17
TOP1MT-213ENST00000521193 CADPSQ9ULU8 1353 aa22.29■■□□□ 1.16
TOP1MT-213ENST00000521193 CFTRP13569 1480 aa22.25■■□□□ 1.15
TOP1MT-213ENST00000521193 LAMC3Q9Y6N6 1575 aa22.18■■□□□ 1.14
TOP1MT-213ENST00000521193 CHIC1Q5VXU3 224 aa22.18■■□□□ 1.14
TOP1MT-213ENST00000521193 FANCD2Q9BXW9 1451 aa22.06■■□□□ 1.12
TOP1MT-213ENST00000521193 PRDM2Q13029 1718 aa22.04■■□□□ 1.12
TOP1MT-213ENST00000521193 KIF21AQ7Z4S6 1674 aa22.03■■□□□ 1.12
TOP1MT-213ENST00000521193 PDS5BQ9NTI5 1447 aa22.03■■□□□ 1.12
TOP1MT-213ENST00000521193 ERCC6Q03468 1493 aa21.98■■□□□ 1.11
TOP1MT-213ENST00000521193 ABCC8Q09428 1581 aa21.98■■□□□ 1.11
TOP1MT-213ENST00000521193 CEP164Q9UPV0 1460 aa21.95■■□□□ 1.1
TOP1MT-213ENST00000521193 TRIM41Q8WV44 630 aa21.91■■□□□ 1.1
TOP1MT-213ENST00000521193 URB2Q14146 1524 aaKnown RBP21.85■■□□□ 1.09
TOP1MT-213ENST00000521193 CUX1P39880 1505 aa21.83■■□□□ 1.08
TOP1MT-213ENST00000521193 WRNQ14191 1432 aaPredicted RBP eCLIP21.82■■□□□ 1.08
TOP1MT-213ENST00000521193 MRC2Q9UBG0 1479 aa21.81■■□□□ 1.08
TOP1MT-213ENST00000521193 THOC2Q8NI27 1593 aaKnown RBP21.81■■□□□ 1.08
TOP1MT-213ENST00000521193 SYNJ1O43426 1573 aa21.81■■□□□ 1.08
TOP1MT-213ENST00000521193 TOPBP1Q92547 1522 aa21.76■■□□□ 1.07
TOP1MT-213ENST00000521193 DNMBPQ6XZF7 1577 aa21.73■■□□□ 1.07
TOP1MT-213ENST00000521193 WDR62O43379 1518 aa21.72■■□□□ 1.07
TOP1MT-213ENST00000521193 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
TOP1MT-213ENST00000521193 BIVM-ERCC5R4GMW8 1640 aa21.66■■□□□ 1.06
TOP1MT-213ENST00000521193 FGD5Q6ZNL6 1462 aa21.66■■□□□ 1.06
TOP1MT-213ENST00000521193 POLA1P09884 1462 aaPredicted RBP21.64■■□□□ 1.05
TOP1MT-213ENST00000521193 RAD54L2Q9Y4B4 1467 aa21.6■■□□□ 1.05
TOP1MT-213ENST00000521193 CUX2O14529 1486 aa21.6■■□□□ 1.05
TOP1MT-213ENST00000521193 FAM9AQ8IZU1 332 aaPredicted RBP21.53■■□□□ 1.04
TOP1MT-213ENST00000521193 SOGA1O94964 1423 aa21.53■■□□□ 1.04
TOP1MT-213ENST00000521193 TARBP1Q13395 1621 aaKnown RBP21.48■■□□□ 1.03
TOP1MT-213ENST00000521193 ZNF608Q9ULD9 1512 aaPredicted RBP21.46■■□□□ 1.03
TOP1MT-213ENST00000521193 IFT140Q96RY7 1462 aa21.44■■□□□ 1.02
TOP1MT-213ENST00000521193 TDRD9Q8NDG6 1382 aaKnown RBP21.43■■□□□ 1.02
TOP1MT-213ENST00000521193 RUSC2Q8N2Y8 1516 aa21.43■■□□□ 1.02
TOP1MT-213ENST00000521193 ABCA10Q8WWZ4 1543 aa21.41■■□□□ 1.02
TOP1MT-213ENST00000521193 WDR97A6NE52 1622 aa21.4■■□□□ 1.02
TOP1MT-213ENST00000521193 AQRO60306 1485 aaKnown RBP eCLIP21.39■■□□□ 1.015e-15■■■■■ 69.3
TOP1MT-213ENST00000521193 EEA1Q15075 1411 aa21.36■■□□□ 1.01
TOP1MT-213ENST00000521193 LOC105371045A0A1W2PR82 267 aa21.34■■□□□ 1.01
TOP1MT-213ENST00000521193 EIF4G3O43432 1585 aaKnown RBP21.32■■□□□ 1
TOP1MT-213ENST00000521193 ABCA5Q8WWZ7 1642 aa21.3■■□□□ 1
TOP1MT-213ENST00000521193 CSRNP3Q8WYN3 585 aa21.28■■□□□ 1
TOP1MT-213ENST00000521193 KIF27Q86VH2 1401 aa21.28■■□□□ 1
TOP1MT-213ENST00000521193 GAPVD1Q14C86 1478 aa21.28■■□□□ 1
TOP1MT-213ENST00000521193 EHMT2Q96KQ7 1210 aa21.26■□□□□ 0.99
TOP1MT-213ENST00000521193 IGF1RP08069 1367 aa21.21■□□□□ 0.99
TOP1MT-213ENST00000521193 PBRM1Q86U86 1689 aa21.19■□□□□ 0.98
TOP1MT-213ENST00000521193 GRIN2BQ13224 1484 aa21.18■□□□□ 0.98
TOP1MT-213ENST00000521193 SNAPC4Q5SXM2 1469 aa21.16■□□□□ 0.98
TOP1MT-213ENST00000521193 ERICH3Q5RHP9 1530 aa21.13■□□□□ 0.97
TOP1MT-213ENST00000521193 KIF21BO75037 1637 aa21.1■□□□□ 0.97
TOP1MT-213ENST00000521193 GOLGA3Q08378 1498 aa21.07■□□□□ 0.96
TOP1MT-213ENST00000521193 CARMIL1Q5VZK9 1371 aa21.07■□□□□ 0.96
TOP1MT-213ENST00000521193 ADAMTS12P58397 1594 aa21.06■□□□□ 0.96
TOP1MT-213ENST00000521193 PRXQ9BXM0 1461 aa21.05■□□□□ 0.96
TOP1MT-213ENST00000521193 FBLN2P98095 1184 aa21.05■□□□□ 0.96
TOP1MT-213ENST00000521193 MAGI1Q96QZ7 1491 aaPredicted RBP21.04■□□□□ 0.96
TOP1MT-213ENST00000521193 RAPGEF2Q9Y4G8 1499 aa21.04■□□□□ 0.96
TOP1MT-213ENST00000521193 UBTFP17480 764 aaKnown RBP21.03■□□□□ 0.96
TOP1MT-213ENST00000521193 FHAD1B1AJZ9 1412 aa21.02■□□□□ 0.96
TOP1MT-213ENST00000521193 CUL7Q14999 1698 aa21.01■□□□□ 0.95
TOP1MT-213ENST00000521193 SYNJ2O15056 1496 aa20.99■□□□□ 0.95
TOP1MT-213ENST00000521193 CHMP7Q8WUX9 453 aaPredicted RBP20.98■□□□□ 0.95
TOP1MT-213ENST00000521193 TNIKQ9UKE5 1360 aa20.96■□□□□ 0.95
TOP1MT-213ENST00000521193 CHD1O14646 1710 aa20.95■□□□□ 0.94
TOP1MT-213ENST00000521193 GRIN2AQ12879 1464 aa20.94■□□□□ 0.94
TOP1MT-213ENST00000521193 CEP170Q5SW79 1584 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms