RNA–Protein interactions for RNA: ENST00000437028.5

SNHG11-208, Transcript of small nucleolar RNA host gene 11, humanhuman

TSL 3

Gene SNHG11, Length 1,169 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG11-208ENST00000437028 NISCHQ9Y2I1 1504 aa38.49■■■■□ 3.75
SNHG11-208ENST00000437028 CCDC180Q9P1Z9 1646 aa34.59■■■■□ 3.13
SNHG11-208ENST00000437028 ABCC9O60706 1549 aa34.45■■■■□ 3.11
SNHG11-208ENST00000437028 RB1CC1Q8TDY2 1594 aa32.91■■■□□ 2.86
SNHG11-208ENST00000437028 NACADO15069 1562 aa32.69■■■□□ 2.82
SNHG11-208ENST00000437028 DCAF8L2P0C7V8 631 aa32.46■■■□□ 2.79
SNHG11-208ENST00000437028 MYO15BQ96JP2 1530 aa32.26■■■□□ 2.76
SNHG11-208ENST00000437028 DNAJC5BQ9UF47 199 aa32.18■■■□□ 2.74
SNHG11-208ENST00000437028 UNC13AQ9UPW8 1703 aa32.08■■■□□ 2.73
SNHG11-208ENST00000437028 PABPN1Q86U42 306 aaKnown RBP eCLIP32.05■■■□□ 2.72
SNHG11-208ENST00000437028 ZCCHC6Q5VYS8 1495 aaKnown RBP31.91■■■□□ 2.7
SNHG11-208ENST00000437028 DCAF1Q9Y4B6 1507 aa31.85■■■□□ 2.69
SNHG11-208ENST00000437028 BICRAQ9NZM4 1560 aa31.84■■■□□ 2.69
SNHG11-208ENST00000437028 SHROOM4Q9ULL8 1493 aa31.57■■■□□ 2.64
SNHG11-208ENST00000437028 SCRIBQ14160 1630 aa31.45■■■□□ 2.62
SNHG11-208ENST00000437028 CC2D2AQ9P2K1 1620 aa31.15■■■□□ 2.58
SNHG11-208ENST00000437028 EIF4G1Q04637 1599 aaKnown RBP31.11■■■□□ 2.57
SNHG11-208ENST00000437028 CECR2Q9BXF3 1484 aa31.08■■■□□ 2.57
SNHG11-208ENST00000437028 NCAPD3P42695 1498 aa30.13■■■□□ 2.41
SNHG11-208ENST00000437028 ATAD2BQ9ULI0 1458 aa30.03■■■□□ 2.4
SNHG11-208ENST00000437028 SMARCA4P51532 1647 aa30.03■■■□□ 2.4
SNHG11-208ENST00000437028 SMARCA2P51531 1590 aa30.02■■■□□ 2.4
SNHG11-208ENST00000437028 HMGXB3Q12766 1538 aa29.95■■■□□ 2.38
SNHG11-208ENST00000437028 BAZ1AQ9NRL2 1556 aaPredicted RBP29.93■■■□□ 2.38
SNHG11-208ENST00000437028 ERCC6Q03468 1493 aa29.82■■■□□ 2.36
SNHG11-208ENST00000437028 BAZ1BQ9UIG0 1483 aaKnown RBP29.78■■■□□ 2.36
SNHG11-208ENST00000437028 CUX2O14529 1486 aa29.76■■■□□ 2.35
SNHG11-208ENST00000437028 PEG3Q9GZU2 1588 aa29.75■■■□□ 2.35
SNHG11-208ENST00000437028 DNAJC5Q9H3Z4 198 aa29.63■■■□□ 2.33
SNHG11-208ENST00000437028 MROH2BQ7Z745 1585 aa29.62■■■□□ 2.33
SNHG11-208ENST00000437028 NESP48681 1621 aa29.58■■■□□ 2.33
SNHG11-208ENST00000437028 LAMC3Q9Y6N6 1575 aa29.49■■■□□ 2.31
SNHG11-208ENST00000437028 PDS5BQ9NTI5 1447 aa29.33■■■□□ 2.29
SNHG11-208ENST00000437028 THOC2Q8NI27 1593 aaKnown RBP29.33■■■□□ 2.29
SNHG11-208ENST00000437028 WIZO95785 1651 aa29.28■■■□□ 2.28
SNHG11-208ENST00000437028 KIF21AQ7Z4S6 1674 aa29.25■■■□□ 2.27
SNHG11-208ENST00000437028 CADPSQ9ULU8 1353 aa29.22■■■□□ 2.27
SNHG11-208ENST00000437028 MRC2Q9UBG0 1479 aa29.04■■■□□ 2.24
SNHG11-208ENST00000437028 RSF1Q96T23 1441 aaPredicted RBP29.03■■■□□ 2.24
SNHG11-208ENST00000437028 WDR62O43379 1518 aa28.96■■■□□ 2.23
SNHG11-208ENST00000437028 TOP2AP11388 1531 aaKnown RBP28.96■■■□□ 2.23
SNHG11-208ENST00000437028 CEP164Q9UPV0 1460 aa28.94■■■□□ 2.22
SNHG11-208ENST00000437028 CFTRP13569 1480 aa28.9■■■□□ 2.22
SNHG11-208ENST00000437028 FANCD2Q9BXW9 1451 aa28.89■■■□□ 2.22
SNHG11-208ENST00000437028 PRDM2Q13029 1718 aa28.66■■■□□ 2.18
SNHG11-208ENST00000437028 URB2Q14146 1524 aaKnown RBP28.61■■■□□ 2.17
SNHG11-208ENST00000437028 CCDC88BA6NC98 1476 aa28.59■■■□□ 2.17
SNHG11-208ENST00000437028 OSCARQ8IYS5 282 aa28.39■■■□□ 2.14
SNHG11-208ENST00000437028 IFT140Q96RY7 1462 aa28.37■■■□□ 2.13
SNHG11-208ENST00000437028 ABCC8Q09428 1581 aa28.37■■■□□ 2.13
SNHG11-208ENST00000437028 TRIM41Q8WV44 630 aa28.34■■■□□ 2.13
SNHG11-208ENST00000437028 TOPBP1Q92547 1522 aa28.33■■■□□ 2.13
SNHG11-208ENST00000437028 DNMBPQ6XZF7 1577 aa28.27■■■□□ 2.12
SNHG11-208ENST00000437028 ZNF608Q9ULD9 1512 aaPredicted RBP28.23■■■□□ 2.11
SNHG11-208ENST00000437028 EIF4G3O43432 1585 aaKnown RBP28.14■■■□□ 2.1
SNHG11-208ENST00000437028 TARBP1Q13395 1621 aaKnown RBP28.07■■■□□ 2.08
SNHG11-208ENST00000437028 POLA1P09884 1462 aaPredicted RBP28.05■■■□□ 2.08
SNHG11-208ENST00000437028 AQRO60306 1485 aaKnown RBP eCLIP28■■■□□ 2.071e-6■■■■■ 33.8
SNHG11-208ENST00000437028 RIMBP3CA6NJZ7 1639 aa27.99■■■□□ 2.07
SNHG11-208ENST00000437028 RIMBP3BA6NNM3 1639 aa27.99■■■□□ 2.07
SNHG11-208ENST00000437028 RIMBP3Q9UFD9 1639 aa27.99■■■□□ 2.07
SNHG11-208ENST00000437028 SOGA1O94964 1423 aa27.93■■■□□ 2.06
SNHG11-208ENST00000437028 CHD1O14646 1710 aa27.91■■■□□ 2.06
SNHG11-208ENST00000437028 ARHGEF11O15085 1522 aa27.91■■■□□ 2.06
SNHG11-208ENST00000437028 RAD54L2Q9Y4B4 1467 aa27.9■■■□□ 2.06
SNHG11-208ENST00000437028 WDR97A6NE52 1622 aa27.9■■■□□ 2.06
SNHG11-208ENST00000437028 FGD5Q6ZNL6 1462 aa27.88■■■□□ 2.05
SNHG11-208ENST00000437028 FBLN2P98095 1184 aa27.85■■■□□ 2.05
SNHG11-208ENST00000437028 TDRD9Q8NDG6 1382 aaKnown RBP27.84■■■□□ 2.05
SNHG11-208ENST00000437028 CUX1P39880 1505 aa27.83■■■□□ 2.05
SNHG11-208ENST00000437028 SUPT5HO00267 1087 aaKnown RBP27.77■■■□□ 2.04
SNHG11-208ENST00000437028 SNAPC4Q5SXM2 1469 aa27.75■■■□□ 2.03
SNHG11-208ENST00000437028 MAGI1Q96QZ7 1491 aaPredicted RBP27.72■■■□□ 2.03
SNHG11-208ENST00000437028 GRIN2BQ13224 1484 aa27.71■■■□□ 2.03
SNHG11-208ENST00000437028 CYB5RLQ6IPT4 315 aa27.68■■■□□ 2.02
SNHG11-208ENST00000437028 CHMP7Q8WUX9 453 aaPredicted RBP27.68■■■□□ 2.02
SNHG11-208ENST00000437028 SYNJ1O43426 1573 aa27.65■■■□□ 2.02
SNHG11-208ENST00000437028 SYNJ2O15056 1496 aa27.62■■■□□ 2.01
SNHG11-208ENST00000437028 ARAP1Q96P48 1450 aa27.61■■■□□ 2.01
SNHG11-208ENST00000437028 PBRM1Q86U86 1689 aa27.6■■■□□ 2.01
SNHG11-208ENST00000437028 GAPVD1Q14C86 1478 aa27.6■■■□□ 2.01
SNHG11-208ENST00000437028 CLASP1Q7Z460 1538 aa27.59■■■□□ 2.01
SNHG11-208ENST00000437028 ABCA10Q8WWZ4 1543 aa27.59■■■□□ 2.01
SNHG11-208ENST00000437028 ABCA5Q8WWZ7 1642 aa27.53■■■□□ 2
SNHG11-208ENST00000437028 WRNQ14191 1432 aaPredicted RBP eCLIP27.5■■□□□ 1.99
SNHG11-208ENST00000437028 TOP2BQ02880 1626 aa27.45■■□□□ 1.99
SNHG11-208ENST00000437028 BIVM-ERCC5R4GMW8 1640 aa27.45■■□□□ 1.99
SNHG11-208ENST00000437028 TRHP20396 242 aaPredicted RBP27.4■■□□□ 1.98
SNHG11-208ENST00000437028 GRIN2AQ12879 1464 aa27.33■■□□□ 1.97
SNHG11-208ENST00000437028 ADAMTS12P58397 1594 aa27.33■■□□□ 1.97
SNHG11-208ENST00000437028 ERICH3Q5RHP9 1530 aa27.27■■□□□ 1.96
SNHG11-208ENST00000437028 FHAD1B1AJZ9 1412 aa27.27■■□□□ 1.96
SNHG11-208ENST00000437028 NUP160Q12769 1436 aa27.24■■□□□ 1.95
SNHG11-208ENST00000437028 CEP170Q5SW79 1584 aa27.21■■□□□ 1.95
SNHG11-208ENST00000437028 SHROOM2Q13796 1616 aa27.12■■□□□ 1.93
SNHG11-208ENST00000437028 ERCC6L2Q5T890 1561 aa27.09■■□□□ 1.93
SNHG11-208ENST00000437028 PRG4Q92954 1404 aaPredicted RBP26.97■■□□□ 1.91
SNHG11-208ENST00000437028 JPH4Q96JJ6 628 aa26.95■■□□□ 1.9
SNHG11-208ENST00000437028 RUSC2Q8N2Y8 1516 aa26.95■■□□□ 1.9
SNHG11-208ENST00000437028 KIF27Q86VH2 1401 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms