RNA–Protein interactions for RNA: ENST00000400436.6

SNHG11-202, Transcript of small nucleolar RNA host gene 11, humanhuman

TSL 2

Gene SNHG11, Length 2,652 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG11-202ENST00000400436 NISCHQ9Y2I1 1504 aa31.43■■■□□ 2.62
SNHG11-202ENST00000400436 SHROOM4Q9ULL8 1493 aa27.4■■□□□ 1.98
SNHG11-202ENST00000400436 SUPT5HO00267 1087 aaKnown RBP26.96■■□□□ 1.91
SNHG11-202ENST00000400436 ZCCHC6Q5VYS8 1495 aaKnown RBP26.58■■□□□ 1.85
SNHG11-202ENST00000400436 DCAF8L2P0C7V8 631 aa26.54■■□□□ 1.84
SNHG11-202ENST00000400436 CCDC180Q9P1Z9 1646 aa26.44■■□□□ 1.82
SNHG11-202ENST00000400436 CHIC1Q5VXU3 224 aa26.11■■□□□ 1.77
SNHG11-202ENST00000400436 MYO15BQ96JP2 1530 aa26.09■■□□□ 1.77
SNHG11-202ENST00000400436 PCGF6Q9BYE7 350 aa25.69■■□□□ 1.7
SNHG11-202ENST00000400436 HRCP23327 699 aa25.63■■□□□ 1.69
SNHG11-202ENST00000400436 DCAF1Q9Y4B6 1507 aa25.56■■□□□ 1.68
SNHG11-202ENST00000400436 LOC105371045A0A1W2PR82 267 aa25.54■■□□□ 1.68
SNHG11-202ENST00000400436 PPARGC1BQ86YN6 1023 aaKnown RBP25.33■■□□□ 1.65
SNHG11-202ENST00000400436 SCRIBQ14160 1630 aa25.16■■□□□ 1.62
SNHG11-202ENST00000400436 ABCC9O60706 1549 aa25.12■■□□□ 1.61
SNHG11-202ENST00000400436 RSF1Q96T23 1441 aaPredicted RBP25.03■■□□□ 1.6
SNHG11-202ENST00000400436 FAM9AQ8IZU1 332 aaPredicted RBP24.99■■□□□ 1.59
SNHG11-202ENST00000400436 TRIM41Q8WV44 630 aa24.96■■□□□ 1.59
SNHG11-202ENST00000400436 EHMT2Q96KQ7 1210 aa24.96■■□□□ 1.59
SNHG11-202ENST00000400436 TRIM26Q12899 539 aaPredicted RBP24.94■■□□□ 1.58
SNHG11-202ENST00000400436 RB1CC1Q8TDY2 1594 aa24.85■■□□□ 1.57
SNHG11-202ENST00000400436 CECR2Q9BXF3 1484 aa24.68■■□□□ 1.54
SNHG11-202ENST00000400436 MROH2BQ7Z745 1585 aa24.55■■□□□ 1.52
SNHG11-202ENST00000400436 NACADO15069 1562 aa24.47■■□□□ 1.51
SNHG11-202ENST00000400436 WIZO95785 1651 aa24.46■■□□□ 1.51
SNHG11-202ENST00000400436 ZEB1P37275 1124 aaPredicted RBP24.37■■□□□ 1.49
SNHG11-202ENST00000400436 TTBK1Q5TCY1 1321 aaPredicted RBP24.16■■□□□ 1.46
SNHG11-202ENST00000400436 BAZ1AQ9NRL2 1556 aaPredicted RBP24.15■■□□□ 1.46
SNHG11-202ENST00000400436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.12■■□□□ 1.45
SNHG11-202ENST00000400436 ABCC8Q09428 1581 aa24.06■■□□□ 1.44
SNHG11-202ENST00000400436 EIF4G1Q04637 1599 aaKnown RBP24.01■■□□□ 1.43
SNHG11-202ENST00000400436 CCER1Q8TC90 406 aaPredicted RBP24■■□□□ 1.43
SNHG11-202ENST00000400436 CCDC88BA6NC98 1476 aa23.99■■□□□ 1.43
SNHG11-202ENST00000400436 TOP2AP11388 1531 aaKnown RBP23.91■■□□□ 1.42
SNHG11-202ENST00000400436 SMARCA4P51532 1647 aa23.9■■□□□ 1.42
SNHG11-202ENST00000400436 SOGA1O94964 1423 aa23.87■■□□□ 1.41
SNHG11-202ENST00000400436 PABPN1Q86U42 306 aaKnown RBP eCLIP23.85■■□□□ 1.41
SNHG11-202ENST00000400436 SMARCA2P51531 1590 aa23.85■■□□□ 1.41
SNHG11-202ENST00000400436 SCAF1Q9H7N4 1312 aaKnown RBP23.85■■□□□ 1.41
SNHG11-202ENST00000400436 UBTFP17480 764 aaKnown RBP23.81■■□□□ 1.4
SNHG11-202ENST00000400436 UNC13AQ9UPW8 1703 aa23.81■■□□□ 1.4
SNHG11-202ENST00000400436 CEP162Q5TB80 1403 aa23.8■■□□□ 1.4
SNHG11-202ENST00000400436 RUSC2Q8N2Y8 1516 aa23.78■■□□□ 1.4
SNHG11-202ENST00000400436 CSRNP3Q8WYN3 585 aa23.72■■□□□ 1.39
SNHG11-202ENST00000400436 WRNQ14191 1432 aaPredicted RBP eCLIP23.65■■□□□ 1.38
SNHG11-202ENST00000400436 TNIKQ9UKE5 1360 aa23.65■■□□□ 1.38
SNHG11-202ENST00000400436 DIEXFQ68CQ4 756 aaKnown RBP23.6■■□□□ 1.37
SNHG11-202ENST00000400436 RANGAP1P46060 587 aaPredicted RBP23.53■■□□□ 1.36
SNHG11-202ENST00000400436 NEUROD1Q13562 356 aa23.53■■□□□ 1.36
SNHG11-202ENST00000400436 EEA1Q15075 1411 aa23.51■■□□□ 1.35
SNHG11-202ENST00000400436 GOLGA3Q08378 1498 aa23.49■■□□□ 1.35
SNHG11-202ENST00000400436 BICRAQ9NZM4 1560 aa23.48■■□□□ 1.35
SNHG11-202ENST00000400436 ACIN1Q9UKV3 1341 aaKnown RBP23.47■■□□□ 1.35
SNHG11-202ENST00000400436 HNRNPUL2Q1KMD3 747 aaKnown RBP23.47■■□□□ 1.35
SNHG11-202ENST00000400436 SYNJ1O43426 1573 aa23.4■■□□□ 1.34
SNHG11-202ENST00000400436 GTF3C3Q9Y5Q9 886 aa23.32■■□□□ 1.32
SNHG11-202ENST00000400436 CEP164Q9UPV0 1460 aa23.32■■□□□ 1.32
SNHG11-202ENST00000400436 CLIP1P30622 1438 aa23.31■■□□□ 1.32
SNHG11-202ENST00000400436 ZNF316A6NFI3 1004 aaPredicted RBP23.3■■□□□ 1.32
SNHG11-202ENST00000400436 PELP1Q8IZL8 1130 aaKnown RBP23.29■■□□□ 1.32
SNHG11-202ENST00000400436 CENPBP07199 599 aaPredicted RBP23.29■■□□□ 1.32
SNHG11-202ENST00000400436 PEG3Q9GZU2 1588 aa23.27■■□□□ 1.32
SNHG11-202ENST00000400436 ATAD2BQ9ULI0 1458 aa23.27■■□□□ 1.32
SNHG11-202ENST00000400436 APLP2Q06481 763 aa23.26■■□□□ 1.31
SNHG11-202ENST00000400436 YTHDC1Q96MU7 727 aaKnown RBP23.26■■□□□ 1.31
SNHG11-202ENST00000400436 BAZ1BQ9UIG0 1483 aaKnown RBP23.25■■□□□ 1.31
SNHG11-202ENST00000400436 RAPGEF2Q9Y4G8 1499 aa23.24■■□□□ 1.31
SNHG11-202ENST00000400436 KIF21BO75037 1637 aa23.21■■□□□ 1.31
SNHG11-202ENST00000400436 VPS8Q8N3P4 1428 aa23.17■■□□□ 1.3
SNHG11-202ENST00000400436 MIER1Q8N108 512 aa23.1■■□□□ 1.29
SNHG11-202ENST00000400436 TOP2BQ02880 1626 aa22.99■■□□□ 1.27
SNHG11-202ENST00000400436 KANK4Q5T7N3 995 aaPredicted RBP22.95■■□□□ 1.27
SNHG11-202ENST00000400436 ARAP1Q96P48 1450 aa22.86■■□□□ 1.25
SNHG11-202ENST00000400436 ITGAEP38570 1179 aa22.85■■□□□ 1.25
SNHG11-202ENST00000400436 BIVM-ERCC5R4GMW8 1640 aa22.85■■□□□ 1.25
SNHG11-202ENST00000400436 PRXQ9BXM0 1461 aa22.84■■□□□ 1.25
SNHG11-202ENST00000400436 CUX1P39880 1505 aa22.81■■□□□ 1.24
SNHG11-202ENST00000400436 DHX57Q6P158 1386 aaKnown RBP22.8■■□□□ 1.24
SNHG11-202ENST00000400436 ERICH3Q5RHP9 1530 aa22.78■■□□□ 1.24
SNHG11-202ENST00000400436 KIF27Q86VH2 1401 aa22.75■■□□□ 1.23
SNHG11-202ENST00000400436 NCAPD3P42695 1498 aa22.69■■□□□ 1.22
SNHG11-202ENST00000400436 ARHGAP35Q9NRY4 1499 aa22.64■■□□□ 1.22
SNHG11-202ENST00000400436 HMGXB3Q12766 1538 aa22.64■■□□□ 1.22
SNHG11-202ENST00000400436 CLSPNQ9HAW4 1339 aa22.63■■□□□ 1.21
SNHG11-202ENST00000400436 CCNB3Q8WWL7 1395 aa22.61■■□□□ 1.21
SNHG11-202ENST00000400436 CFTRP13569 1480 aa22.61■■□□□ 1.21
SNHG11-202ENST00000400436 RRBP1Q9P2E9 1410 aaKnown RBP22.61■■□□□ 1.21
SNHG11-202ENST00000400436 CUX2O14529 1486 aa22.57■■□□□ 1.2
SNHG11-202ENST00000400436 P3H3Q8IVL6 736 aa22.55■■□□□ 1.2
SNHG11-202ENST00000400436 ATP1B4Q9UN42 357 aaPredicted RBP22.55■■□□□ 1.2
SNHG11-202ENST00000400436 IGF1RP08069 1367 aa22.52■■□□□ 1.2
SNHG11-202ENST00000400436 RAB3GAP2Q9H2M9 1393 aa22.48■■□□□ 1.19
SNHG11-202ENST00000400436 FAM50AQ14320 339 aaKnown RBP22.48■■□□□ 1.19
SNHG11-202ENST00000400436 CARMIL1Q5VZK9 1371 aa22.45■■□□□ 1.18
SNHG11-202ENST00000400436 KCNH8Q96L42 1107 aa22.42■■□□□ 1.18
SNHG11-202ENST00000400436 FGD5Q6ZNL6 1462 aa22.4■■□□□ 1.18
SNHG11-202ENST00000400436 SIN3AQ96ST3 1273 aa22.4■■□□□ 1.18
SNHG11-202ENST00000400436 TIAM1Q13009 1591 aa22.38■■□□□ 1.17
SNHG11-202ENST00000400436 PHLDB1Q86UU1 1377 aa22.38■■□□□ 1.17
SNHG11-202ENST00000400436 CADPSQ9ULU8 1353 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms