RNA–Protein interactions for RNA: ENST00000440918.5

SNHG11-209, Transcript of small nucleolar RNA host gene 11, humanhuman

TSL 3 BASIC

Gene SNHG11, Length 556 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG11-209ENST00000440918 NISCHQ9Y2I1 1504 aa37.64■■■■□ 3.62
SNHG11-209ENST00000440918 CCDC180Q9P1Z9 1646 aa33.5■■■□□ 2.95
SNHG11-209ENST00000440918 ABCC9O60706 1549 aa33.16■■■□□ 2.9
SNHG11-209ENST00000440918 DCAF8L2P0C7V8 631 aa31.72■■■□□ 2.67
SNHG11-209ENST00000440918 RB1CC1Q8TDY2 1594 aa31.72■■■□□ 2.67
SNHG11-209ENST00000440918 NACADO15069 1562 aa31.61■■■□□ 2.65
SNHG11-209ENST00000440918 MYO15BQ96JP2 1530 aa31.32■■■□□ 2.6
SNHG11-209ENST00000440918 ZCCHC6Q5VYS8 1495 aaKnown RBP31.25■■■□□ 2.59
SNHG11-209ENST00000440918 DCAF1Q9Y4B6 1507 aa31.08■■■□□ 2.57
SNHG11-209ENST00000440918 PABPN1Q86U42 306 aaKnown RBP eCLIP31.01■■■□□ 2.55
SNHG11-209ENST00000440918 UNC13AQ9UPW8 1703 aa30.98■■■□□ 2.55
SNHG11-209ENST00000440918 DNAJC5BQ9UF47 199 aa30.79■■■□□ 2.52
SNHG11-209ENST00000440918 BICRAQ9NZM4 1560 aa30.78■■■□□ 2.52
SNHG11-209ENST00000440918 SCRIBQ14160 1630 aa30.59■■■□□ 2.49
SNHG11-209ENST00000440918 SHROOM4Q9ULL8 1493 aa30.35■■■□□ 2.45
SNHG11-209ENST00000440918 EIF4G1Q04637 1599 aaKnown RBP29.98■■■□□ 2.39
SNHG11-209ENST00000440918 CC2D2AQ9P2K1 1620 aa29.94■■■□□ 2.38
SNHG11-209ENST00000440918 CECR2Q9BXF3 1484 aa29.8■■■□□ 2.36
SNHG11-209ENST00000440918 SMARCA4P51532 1647 aa29.23■■■□□ 2.27
SNHG11-209ENST00000440918 NCAPD3P42695 1498 aa29.22■■■□□ 2.27
SNHG11-209ENST00000440918 ATAD2BQ9ULI0 1458 aa29.19■■■□□ 2.26
SNHG11-209ENST00000440918 BAZ1AQ9NRL2 1556 aaPredicted RBP29.16■■■□□ 2.26
SNHG11-209ENST00000440918 SMARCA2P51531 1590 aa29.09■■■□□ 2.25
SNHG11-209ENST00000440918 MROH2BQ7Z745 1585 aa29.01■■■□□ 2.24
SNHG11-209ENST00000440918 HMGXB3Q12766 1538 aa28.97■■■□□ 2.23
SNHG11-209ENST00000440918 PEG3Q9GZU2 1588 aa28.93■■■□□ 2.22
SNHG11-209ENST00000440918 BAZ1BQ9UIG0 1483 aaKnown RBP28.91■■■□□ 2.22
SNHG11-209ENST00000440918 WIZO95785 1651 aa28.68■■■□□ 2.18
SNHG11-209ENST00000440918 NESP48681 1621 aa28.61■■■□□ 2.17
SNHG11-209ENST00000440918 RSF1Q96T23 1441 aaPredicted RBP28.6■■■□□ 2.17
SNHG11-209ENST00000440918 ERCC6Q03468 1493 aa28.57■■■□□ 2.16
SNHG11-209ENST00000440918 LAMC3Q9Y6N6 1575 aa28.44■■■□□ 2.14
SNHG11-209ENST00000440918 CADPSQ9ULU8 1353 aa28.37■■■□□ 2.13
SNHG11-209ENST00000440918 CUX2O14529 1486 aa28.34■■■□□ 2.13
SNHG11-209ENST00000440918 TOP2AP11388 1531 aaKnown RBP28.32■■■□□ 2.12
SNHG11-209ENST00000440918 PDS5BQ9NTI5 1447 aa28.31■■■□□ 2.12
SNHG11-209ENST00000440918 KIF21AQ7Z4S6 1674 aa28.2■■■□□ 2.11
SNHG11-209ENST00000440918 THOC2Q8NI27 1593 aaKnown RBP28.15■■■□□ 2.1
SNHG11-209ENST00000440918 DNAJC5Q9H3Z4 198 aa28.14■■■□□ 2.1
SNHG11-209ENST00000440918 CFTRP13569 1480 aa28.11■■■□□ 2.09
SNHG11-209ENST00000440918 CCDC88BA6NC98 1476 aa28.07■■■□□ 2.08
SNHG11-209ENST00000440918 FANCD2Q9BXW9 1451 aa28.02■■■□□ 2.08
SNHG11-209ENST00000440918 MRC2Q9UBG0 1479 aa28■■■□□ 2.07
SNHG11-209ENST00000440918 CEP164Q9UPV0 1460 aa27.98■■■□□ 2.07
SNHG11-209ENST00000440918 WDR62O43379 1518 aa27.88■■■□□ 2.05
SNHG11-209ENST00000440918 PRDM2Q13029 1718 aa27.79■■■□□ 2.04
SNHG11-209ENST00000440918 SUPT5HO00267 1087 aaKnown RBP27.77■■■□□ 2.04
SNHG11-209ENST00000440918 URB2Q14146 1524 aaKnown RBP27.75■■■□□ 2.03
SNHG11-209ENST00000440918 TOPBP1Q92547 1522 aa27.53■■■□□ 2
SNHG11-209ENST00000440918 ABCC8Q09428 1581 aa27.52■■■□□ 2
SNHG11-209ENST00000440918 DNMBPQ6XZF7 1577 aa27.44■■□□□ 1.98
SNHG11-209ENST00000440918 IFT140Q96RY7 1462 aa27.42■■□□□ 1.98
SNHG11-209ENST00000440918 ZNF608Q9ULD9 1512 aaPredicted RBP27.35■■□□□ 1.97
SNHG11-209ENST00000440918 POLA1P09884 1462 aaPredicted RBP27.27■■□□□ 1.96
SNHG11-209ENST00000440918 OSCARQ8IYS5 282 aa27.25■■□□□ 1.95
SNHG11-209ENST00000440918 TARBP1Q13395 1621 aaKnown RBP27.23■■□□□ 1.95
SNHG11-209ENST00000440918 SOGA1O94964 1423 aa27.23■■□□□ 1.95
SNHG11-209ENST00000440918 CUX1P39880 1505 aa27.21■■□□□ 1.95
SNHG11-209ENST00000440918 RAD54L2Q9Y4B4 1467 aa27.2■■□□□ 1.95
SNHG11-209ENST00000440918 AQRO60306 1485 aaKnown RBP eCLIP27.19■■□□□ 1.941e-6■■■■■ 33.8
SNHG11-209ENST00000440918 FGD5Q6ZNL6 1462 aa27.17■■□□□ 1.94
SNHG11-209ENST00000440918 EIF4G3O43432 1585 aaKnown RBP27.15■■□□□ 1.94
SNHG11-209ENST00000440918 TDRD9Q8NDG6 1382 aaKnown RBP27.11■■□□□ 1.93
SNHG11-209ENST00000440918 FBLN2P98095 1184 aa26.97■■□□□ 1.91
SNHG11-209ENST00000440918 WRNQ14191 1432 aaPredicted RBP eCLIP26.96■■□□□ 1.91
SNHG11-209ENST00000440918 WDR97A6NE52 1622 aa26.94■■□□□ 1.9
SNHG11-209ENST00000440918 TRIM41Q8WV44 630 aa26.89■■□□□ 1.9
SNHG11-209ENST00000440918 TOP2BQ02880 1626 aa26.89■■□□□ 1.9
SNHG11-209ENST00000440918 ABCA10Q8WWZ4 1543 aa26.89■■□□□ 1.89
SNHG11-209ENST00000440918 GRIN2BQ13224 1484 aa26.88■■□□□ 1.89
SNHG11-209ENST00000440918 CHD1O14646 1710 aa26.88■■□□□ 1.89
SNHG11-209ENST00000440918 BIVM-ERCC5R4GMW8 1640 aa26.87■■□□□ 1.89
SNHG11-209ENST00000440918 SYNJ1O43426 1573 aa26.87■■□□□ 1.89
SNHG11-209ENST00000440918 SNAPC4Q5SXM2 1469 aa26.87■■□□□ 1.89
SNHG11-209ENST00000440918 GAPVD1Q14C86 1478 aa26.86■■□□□ 1.89
SNHG11-209ENST00000440918 CHMP7Q8WUX9 453 aaPredicted RBP26.83■■□□□ 1.89
SNHG11-209ENST00000440918 MAGI1Q96QZ7 1491 aaPredicted RBP26.81■■□□□ 1.88
SNHG11-209ENST00000440918 ABCA5Q8WWZ7 1642 aa26.76■■□□□ 1.87
SNHG11-209ENST00000440918 PBRM1Q86U86 1689 aa26.75■■□□□ 1.87
SNHG11-209ENST00000440918 SYNJ2O15056 1496 aa26.73■■□□□ 1.87
SNHG11-209ENST00000440918 RIMBP3CA6NJZ7 1639 aa26.72■■□□□ 1.87
SNHG11-209ENST00000440918 RIMBP3BA6NNM3 1639 aa26.72■■□□□ 1.87
SNHG11-209ENST00000440918 RIMBP3Q9UFD9 1639 aa26.72■■□□□ 1.87
SNHG11-209ENST00000440918 ARHGEF11O15085 1522 aa26.7■■□□□ 1.86
SNHG11-209ENST00000440918 CYB5RLQ6IPT4 315 aa26.59■■□□□ 1.85
SNHG11-209ENST00000440918 CLASP1Q7Z460 1538 aa26.59■■□□□ 1.85
SNHG11-209ENST00000440918 ERICH3Q5RHP9 1530 aa26.55■■□□□ 1.84
SNHG11-209ENST00000440918 FHAD1B1AJZ9 1412 aa26.54■■□□□ 1.84
SNHG11-209ENST00000440918 ADAMTS12P58397 1594 aa26.52■■□□□ 1.84
SNHG11-209ENST00000440918 GRIN2AQ12879 1464 aa26.52■■□□□ 1.84
SNHG11-209ENST00000440918 ARAP1Q96P48 1450 aa26.47■■□□□ 1.83
SNHG11-209ENST00000440918 NUP160Q12769 1436 aa26.42■■□□□ 1.82
SNHG11-209ENST00000440918 KIF27Q86VH2 1401 aa26.41■■□□□ 1.82
SNHG11-209ENST00000440918 IGF1RP08069 1367 aa26.41■■□□□ 1.82
SNHG11-209ENST00000440918 CEP170Q5SW79 1584 aa26.39■■□□□ 1.82
SNHG11-209ENST00000440918 JPH4Q96JJ6 628 aa26.26■■□□□ 1.79
SNHG11-209ENST00000440918 ERCC6L2Q5T890 1561 aa26.24■■□□□ 1.79
SNHG11-209ENST00000440918 CARMIL1Q5VZK9 1371 aa26.23■■□□□ 1.79
SNHG11-209ENST00000440918 CUL7Q14999 1698 aa26.22■■□□□ 1.79
SNHG11-209ENST00000440918 SHROOM2Q13796 1616 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms