RNA–Protein interactions for RNA: ENST00000421599.5

SNHG11-205, Transcript of small nucleolar RNA host gene 11, humanhuman

TSL 3 BASIC

Gene SNHG11, Length 1,046 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG11-205ENST00000421599 NISCHQ9Y2I1 1504 aa41.93■■■■■ 4.3
SNHG11-205ENST00000421599 CCDC180Q9P1Z9 1646 aa37.47■■■■□ 3.59
SNHG11-205ENST00000421599 ABCC9O60706 1549 aa37.17■■■■□ 3.54
SNHG11-205ENST00000421599 RB1CC1Q8TDY2 1594 aa35.55■■■■□ 3.28
SNHG11-205ENST00000421599 NACADO15069 1562 aa35.41■■■■□ 3.26
SNHG11-205ENST00000421599 DCAF8L2P0C7V8 631 aa35.22■■■■□ 3.23
SNHG11-205ENST00000421599 MYO15BQ96JP2 1530 aa35.09■■■■□ 3.21
SNHG11-205ENST00000421599 ZCCHC6Q5VYS8 1495 aaKnown RBP34.82■■■■□ 3.16
SNHG11-205ENST00000421599 DCAF1Q9Y4B6 1507 aa34.71■■■■□ 3.15
SNHG11-205ENST00000421599 PABPN1Q86U42 306 aaKnown RBP eCLIP34.66■■■■□ 3.14
SNHG11-205ENST00000421599 DNAJC5BQ9UF47 199 aa34.62■■■■□ 3.13
SNHG11-205ENST00000421599 UNC13AQ9UPW8 1703 aa34.58■■■■□ 3.13
SNHG11-205ENST00000421599 BICRAQ9NZM4 1560 aa34.47■■■■□ 3.11
SNHG11-205ENST00000421599 SHROOM4Q9ULL8 1493 aa34.18■■■■□ 3.06
SNHG11-205ENST00000421599 SCRIBQ14160 1630 aa34.11■■■■□ 3.05
SNHG11-205ENST00000421599 EIF4G1Q04637 1599 aaKnown RBP33.62■■■□□ 2.97
SNHG11-205ENST00000421599 CC2D2AQ9P2K1 1620 aa33.58■■■□□ 2.97
SNHG11-205ENST00000421599 CECR2Q9BXF3 1484 aa33.5■■■□□ 2.95
SNHG11-205ENST00000421599 NCAPD3P42695 1498 aa32.72■■■□□ 2.83
SNHG11-205ENST00000421599 ATAD2BQ9ULI0 1458 aa32.61■■■□□ 2.81
SNHG11-205ENST00000421599 SMARCA4P51532 1647 aa32.61■■■□□ 2.81
SNHG11-205ENST00000421599 SMARCA2P51531 1590 aa32.55■■■□□ 2.8
SNHG11-205ENST00000421599 BAZ1AQ9NRL2 1556 aaPredicted RBP32.54■■■□□ 2.8
SNHG11-205ENST00000421599 HMGXB3Q12766 1538 aa32.47■■■□□ 2.79
SNHG11-205ENST00000421599 PEG3Q9GZU2 1588 aa32.36■■■□□ 2.77
SNHG11-205ENST00000421599 BAZ1BQ9UIG0 1483 aaKnown RBP32.31■■■□□ 2.76
SNHG11-205ENST00000421599 MROH2BQ7Z745 1585 aa32.28■■■□□ 2.76
SNHG11-205ENST00000421599 ERCC6Q03468 1493 aa32.11■■■□□ 2.73
SNHG11-205ENST00000421599 CUX2O14529 1486 aa32■■■□□ 2.71
SNHG11-205ENST00000421599 NESP48681 1621 aa32■■■□□ 2.71
SNHG11-205ENST00000421599 LAMC3Q9Y6N6 1575 aa31.9■■■□□ 2.7
SNHG11-205ENST00000421599 WIZO95785 1651 aa31.85■■■□□ 2.69
SNHG11-205ENST00000421599 RSF1Q96T23 1441 aaPredicted RBP31.76■■■□□ 2.68
SNHG11-205ENST00000421599 PDS5BQ9NTI5 1447 aa31.74■■■□□ 2.67
SNHG11-205ENST00000421599 CADPSQ9ULU8 1353 aa31.72■■■□□ 2.67
SNHG11-205ENST00000421599 DNAJC5Q9H3Z4 198 aa31.65■■■□□ 2.66
SNHG11-205ENST00000421599 THOC2Q8NI27 1593 aaKnown RBP31.62■■■□□ 2.65
SNHG11-205ENST00000421599 TOP2AP11388 1531 aaKnown RBP31.54■■■□□ 2.64
SNHG11-205ENST00000421599 KIF21AQ7Z4S6 1674 aa31.54■■■□□ 2.64
SNHG11-205ENST00000421599 CFTRP13569 1480 aa31.42■■■□□ 2.62
SNHG11-205ENST00000421599 MRC2Q9UBG0 1479 aa31.4■■■□□ 2.62
SNHG11-205ENST00000421599 CEP164Q9UPV0 1460 aa31.33■■■□□ 2.61
SNHG11-205ENST00000421599 FANCD2Q9BXW9 1451 aa31.33■■■□□ 2.61
SNHG11-205ENST00000421599 WDR62O43379 1518 aa31.32■■■□□ 2.6
SNHG11-205ENST00000421599 CCDC88BA6NC98 1476 aa31.19■■■□□ 2.58
SNHG11-205ENST00000421599 URB2Q14146 1524 aaKnown RBP31.03■■■□□ 2.56
SNHG11-205ENST00000421599 PRDM2Q13029 1718 aa30.97■■■□□ 2.55
SNHG11-205ENST00000421599 ABCC8Q09428 1581 aa30.78■■■□□ 2.52
SNHG11-205ENST00000421599 TOPBP1Q92547 1522 aa30.75■■■□□ 2.51
SNHG11-205ENST00000421599 IFT140Q96RY7 1462 aa30.73■■■□□ 2.51
SNHG11-205ENST00000421599 DNMBPQ6XZF7 1577 aa30.66■■■□□ 2.5
SNHG11-205ENST00000421599 OSCARQ8IYS5 282 aa30.6■■■□□ 2.49
SNHG11-205ENST00000421599 ZNF608Q9ULD9 1512 aaPredicted RBP30.58■■■□□ 2.49
SNHG11-205ENST00000421599 SUPT5HO00267 1087 aaKnown RBP30.51■■■□□ 2.47
SNHG11-205ENST00000421599 POLA1P09884 1462 aaPredicted RBP30.46■■■□□ 2.47
SNHG11-205ENST00000421599 TARBP1Q13395 1621 aaKnown RBP30.44■■■□□ 2.46
SNHG11-205ENST00000421599 EIF4G3O43432 1585 aaKnown RBP30.41■■■□□ 2.46
SNHG11-205ENST00000421599 AQRO60306 1485 aaKnown RBP eCLIP30.36■■■□□ 2.451e-6■■■■■ 33.8
SNHG11-205ENST00000421599 SOGA1O94964 1423 aa30.35■■■□□ 2.45
SNHG11-205ENST00000421599 RAD54L2Q9Y4B4 1467 aa30.31■■■□□ 2.44
SNHG11-205ENST00000421599 CUX1P39880 1505 aa30.31■■■□□ 2.44
SNHG11-205ENST00000421599 FGD5Q6ZNL6 1462 aa30.31■■■□□ 2.44
SNHG11-205ENST00000421599 TRIM41Q8WV44 630 aa30.3■■■□□ 2.44
SNHG11-205ENST00000421599 TDRD9Q8NDG6 1382 aaKnown RBP30.23■■■□□ 2.43
SNHG11-205ENST00000421599 WDR97A6NE52 1622 aa30.22■■■□□ 2.43
SNHG11-205ENST00000421599 FBLN2P98095 1184 aa30.1■■■□□ 2.41
SNHG11-205ENST00000421599 CHD1O14646 1710 aa30.07■■■□□ 2.4
SNHG11-205ENST00000421599 GRIN2BQ13224 1484 aa30.06■■■□□ 2.4
SNHG11-205ENST00000421599 RIMBP3CA6NJZ7 1639 aa30.06■■■□□ 2.4
SNHG11-205ENST00000421599 RIMBP3BA6NNM3 1639 aa30.06■■■□□ 2.4
SNHG11-205ENST00000421599 RIMBP3Q9UFD9 1639 aa30.06■■■□□ 2.4
SNHG11-205ENST00000421599 SNAPC4Q5SXM2 1469 aa30.06■■■□□ 2.4
SNHG11-205ENST00000421599 MAGI1Q96QZ7 1491 aaPredicted RBP30.05■■■□□ 2.4
SNHG11-205ENST00000421599 ARHGEF11O15085 1522 aa30.04■■■□□ 2.4
SNHG11-205ENST00000421599 ABCA10Q8WWZ4 1543 aa30.01■■■□□ 2.4
SNHG11-205ENST00000421599 GAPVD1Q14C86 1478 aa29.99■■■□□ 2.39
SNHG11-205ENST00000421599 WRNQ14191 1432 aaPredicted RBP eCLIP29.97■■■□□ 2.39
SNHG11-205ENST00000421599 CHMP7Q8WUX9 453 aaPredicted RBP29.97■■■□□ 2.39
SNHG11-205ENST00000421599 SYNJ2O15056 1496 aa29.93■■■□□ 2.38
SNHG11-205ENST00000421599 TOP2BQ02880 1626 aa29.92■■■□□ 2.38
SNHG11-205ENST00000421599 ABCA5Q8WWZ7 1642 aa29.89■■■□□ 2.38
SNHG11-205ENST00000421599 BIVM-ERCC5R4GMW8 1640 aa29.89■■■□□ 2.38
SNHG11-205ENST00000421599 SYNJ1O43426 1573 aa29.86■■■□□ 2.37
SNHG11-205ENST00000421599 CLASP1Q7Z460 1538 aa29.84■■■□□ 2.37
SNHG11-205ENST00000421599 PBRM1Q86U86 1689 aa29.84■■■□□ 2.37
SNHG11-205ENST00000421599 CYB5RLQ6IPT4 315 aa29.81■■■□□ 2.36
SNHG11-205ENST00000421599 ARAP1Q96P48 1450 aa29.76■■■□□ 2.35
SNHG11-205ENST00000421599 GRIN2AQ12879 1464 aa29.66■■■□□ 2.34
SNHG11-205ENST00000421599 ERICH3Q5RHP9 1530 aa29.65■■■□□ 2.34
SNHG11-205ENST00000421599 ADAMTS12P58397 1594 aa29.64■■■□□ 2.34
SNHG11-205ENST00000421599 FHAD1B1AJZ9 1412 aa29.64■■■□□ 2.34
SNHG11-205ENST00000421599 NUP160Q12769 1436 aa29.57■■■□□ 2.32
SNHG11-205ENST00000421599 CEP170Q5SW79 1584 aa29.49■■■□□ 2.31
SNHG11-205ENST00000421599 KIF27Q86VH2 1401 aa29.39■■■□□ 2.3
SNHG11-205ENST00000421599 TRHP20396 242 aaPredicted RBP29.38■■■□□ 2.29
SNHG11-205ENST00000421599 SHROOM2Q13796 1616 aa29.36■■■□□ 2.29
SNHG11-205ENST00000421599 IGF1RP08069 1367 aa29.34■■■□□ 2.29
SNHG11-205ENST00000421599 ERCC6L2Q5T890 1561 aa29.33■■■□□ 2.29
SNHG11-205ENST00000421599 JPH4Q96JJ6 628 aa29.27■■■□□ 2.28
SNHG11-205ENST00000421599 PRG4Q92954 1404 aaPredicted RBP29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms