RNA–Protein interactions for RNA: ENST00000398085.7

PDXK-206, Transcript of pyridoxal kinase, humanhuman

TSL 3

Gene PDXK, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXK-206ENST00000398085 NISCHQ9Y2I1 1504 aa53.98■■■■■ 6.23
PDXK-206ENST00000398085 CCDC180Q9P1Z9 1646 aa48.27■■■■■ 5.32
PDXK-206ENST00000398085 ABCC9O60706 1549 aa47.87■■■■■ 5.25
PDXK-206ENST00000398085 RB1CC1Q8TDY2 1594 aa45.77■■■■■ 4.92
PDXK-206ENST00000398085 NACADO15069 1562 aa45.56■■■■■ 4.88
PDXK-206ENST00000398085 DCAF8L2P0C7V8 631 aa45.38■■■■■ 4.86
PDXK-206ENST00000398085 MYO15BQ96JP2 1530 aa45.1■■■■■ 4.81
PDXK-206ENST00000398085 ZCCHC6Q5VYS8 1495 aaKnown RBP44.8■■■■■ 4.76
PDXK-206ENST00000398085 UNC13AQ9UPW8 1703 aa44.73■■■■■ 4.75
PDXK-206ENST00000398085 PABPN1Q86U42 306 aaKnown RBP eCLIP44.65■■■■■ 4.74
PDXK-206ENST00000398085 DCAF1Q9Y4B6 1507 aa44.65■■■■■ 4.74
PDXK-206ENST00000398085 DNAJC5BQ9UF47 199 aa44.63■■■■■ 4.74
PDXK-206ENST00000398085 BICRAQ9NZM4 1560 aa44.43■■■■■ 4.7
PDXK-206ENST00000398085 SCRIBQ14160 1630 aa43.95■■■■■ 4.63
PDXK-206ENST00000398085 SHROOM4Q9ULL8 1493 aa43.89■■■■■ 4.62
PDXK-206ENST00000398085 EIF4G1Q04637 1599 aaKnown RBP43.29■■■■■ 4.52
PDXK-206ENST00000398085 CC2D2AQ9P2K1 1620 aa43.28■■■■■ 4.52
PDXK-206ENST00000398085 CECR2Q9BXF3 1484 aa43.11■■■■■ 4.49
PDXK-206ENST00000398085 NCAPD3P42695 1498 aa42.07■■■■■ 4.33
PDXK-206ENST00000398085 SMARCA4P51532 1647 aa42.01■■■■■ 4.32
PDXK-206ENST00000398085 ATAD2BQ9ULI0 1458 aa41.98■■■■■ 4.31
PDXK-206ENST00000398085 SMARCA2P51531 1590 aa41.88■■■■■ 4.29
PDXK-206ENST00000398085 BAZ1AQ9NRL2 1556 aaPredicted RBP41.87■■■■■ 4.29
PDXK-206ENST00000398085 HMGXB3Q12766 1538 aa41.77■■■■■ 4.28
PDXK-206ENST00000398085 PEG3Q9GZU2 1588 aa41.63■■■■■ 4.26
PDXK-206ENST00000398085 MROH2BQ7Z745 1585 aa41.59■■■■■ 4.25
PDXK-206ENST00000398085 BAZ1BQ9UIG0 1483 aaKnown RBP41.56■■■■■ 4.24
PDXK-206ENST00000398085 ERCC6Q03468 1493 aa41.3■■■■■ 4.2
PDXK-206ENST00000398085 NESP48681 1621 aa41.24■■■■■ 4.19
PDXK-206ENST00000398085 CUX2O14529 1486 aa41.15■■■■■ 4.18
PDXK-206ENST00000398085 WIZO95785 1651 aa41.1■■■■■ 4.17
PDXK-206ENST00000398085 LAMC3Q9Y6N6 1575 aa41.04■■■■■ 4.16
PDXK-206ENST00000398085 RSF1Q96T23 1441 aaPredicted RBP40.88■■■■■ 4.13
PDXK-206ENST00000398085 CADPSQ9ULU8 1353 aa40.81■■■■■ 4.12
PDXK-206ENST00000398085 PDS5BQ9NTI5 1447 aa40.8■■■■■ 4.12
PDXK-206ENST00000398085 THOC2Q8NI27 1593 aaKnown RBP40.74■■■■■ 4.11
PDXK-206ENST00000398085 DNAJC5Q9H3Z4 198 aa40.74■■■■■ 4.11
PDXK-206ENST00000398085 KIF21AQ7Z4S6 1674 aa40.72■■■■■ 4.11
PDXK-206ENST00000398085 TOP2AP11388 1531 aaKnown RBP40.6■■■■■ 4.09
PDXK-206ENST00000398085 CFTRP13569 1480 aa40.42■■■■■ 4.06
PDXK-206ENST00000398085 MRC2Q9UBG0 1479 aa40.4■■■■■ 4.06
PDXK-206ENST00000398085 FANCD2Q9BXW9 1451 aa40.32■■■■■ 4.04
PDXK-206ENST00000398085 CEP164Q9UPV0 1460 aa40.31■■■■■ 4.04
PDXK-206ENST00000398085 WDR62O43379 1518 aa40.29■■■■■ 4.04
PDXK-206ENST00000398085 CCDC88BA6NC98 1476 aa40.16■■■■■ 4.02
PDXK-206ENST00000398085 PRDM2Q13029 1718 aa40.02■■■■■ 4
PDXK-206ENST00000398085 URB2Q14146 1524 aaKnown RBP39.96■■■■□ 3.99
PDXK-206ENST00000398085 TOPBP1Q92547 1522 aa39.6■■■■□ 3.93
PDXK-206ENST00000398085 ABCC8Q09428 1581 aa39.57■■■■□ 3.92
PDXK-206ENST00000398085 IFT140Q96RY7 1462 aa39.51■■■■□ 3.92
PDXK-206ENST00000398085 DNMBPQ6XZF7 1577 aa39.48■■■■□ 3.91
PDXK-206ENST00000398085 ZNF608Q9ULD9 1512 aaPredicted RBP39.4■■■■□ 3.9
PDXK-206ENST00000398085 OSCARQ8IYS5 282 aa39.37■■■■□ 3.89
PDXK-206ENST00000398085 SUPT5HO00267 1087 aaKnown RBP39.33■■■■□ 3.89
PDXK-206ENST00000398085 TARBP1Q13395 1621 aaKnown RBP39.22■■■■□ 3.87
PDXK-206ENST00000398085 POLA1P09884 1462 aaPredicted RBP39.21■■■■□ 3.87
PDXK-206ENST00000398085 EIF4G3O43432 1585 aaKnown RBP39.17■■■■□ 3.86
PDXK-206ENST00000398085 AQRO60306 1485 aaKnown RBP eCLIP39.1■■■■□ 3.857e-7■■■■□ 22.4
PDXK-206ENST00000398085 SOGA1O94964 1423 aa39.06■■■■□ 3.84
PDXK-206ENST00000398085 RAD54L2Q9Y4B4 1467 aa39.05■■■■□ 3.84
PDXK-206ENST00000398085 CUX1P39880 1505 aa39.04■■■■□ 3.84
PDXK-206ENST00000398085 TRIM41Q8WV44 630 aa39.02■■■■□ 3.84
PDXK-206ENST00000398085 FGD5Q6ZNL6 1462 aa39.01■■■■□ 3.84
PDXK-206ENST00000398085 TDRD9Q8NDG6 1382 aaKnown RBP38.93■■■■□ 3.82
PDXK-206ENST00000398085 WDR97A6NE52 1622 aa38.86■■■■□ 3.81
PDXK-206ENST00000398085 CHD1O14646 1710 aa38.83■■■■□ 3.81
PDXK-206ENST00000398085 FBLN2P98095 1184 aa38.76■■■■□ 3.8
PDXK-206ENST00000398085 RIMBP3CA6NJZ7 1639 aa38.75■■■■□ 3.79
PDXK-206ENST00000398085 RIMBP3BA6NNM3 1639 aa38.75■■■■□ 3.79
PDXK-206ENST00000398085 RIMBP3Q9UFD9 1639 aa38.75■■■■□ 3.79
PDXK-206ENST00000398085 SNAPC4Q5SXM2 1469 aa38.68■■■■□ 3.78
PDXK-206ENST00000398085 ARHGEF11O15085 1522 aa38.68■■■■□ 3.78
PDXK-206ENST00000398085 GRIN2BQ13224 1484 aa38.67■■■■□ 3.78
PDXK-206ENST00000398085 MAGI1Q96QZ7 1491 aaPredicted RBP38.63■■■■□ 3.77
PDXK-206ENST00000398085 ABCA10Q8WWZ4 1543 aa38.62■■■■□ 3.77
PDXK-206ENST00000398085 GAPVD1Q14C86 1478 aa38.58■■■■□ 3.77
PDXK-206ENST00000398085 CHMP7Q8WUX9 453 aaPredicted RBP38.56■■■■□ 3.76
PDXK-206ENST00000398085 WRNQ14191 1432 aaPredicted RBP eCLIP38.55■■■■□ 3.76
PDXK-206ENST00000398085 TOP2BQ02880 1626 aa38.53■■■■□ 3.76
PDXK-206ENST00000398085 BIVM-ERCC5R4GMW8 1640 aa38.52■■■■□ 3.76
PDXK-206ENST00000398085 PBRM1Q86U86 1689 aa38.52■■■■□ 3.76
PDXK-206ENST00000398085 ABCA5Q8WWZ7 1642 aa38.5■■■■□ 3.75
PDXK-206ENST00000398085 SYNJ2O15056 1496 aa38.5■■■■□ 3.75
PDXK-206ENST00000398085 SYNJ1O43426 1573 aa38.47■■■■□ 3.75
PDXK-206ENST00000398085 CLASP1Q7Z460 1538 aa38.41■■■■□ 3.74
PDXK-206ENST00000398085 CYB5RLQ6IPT4 315 aa38.39■■■■□ 3.74
PDXK-206ENST00000398085 ARAP1Q96P48 1450 aa38.32■■■■□ 3.72
PDXK-206ENST00000398085 ADAMTS12P58397 1594 aa38.16■■■■□ 3.7
PDXK-206ENST00000398085 GRIN2AQ12879 1464 aa38.15■■■■□ 3.7
PDXK-206ENST00000398085 ERICH3Q5RHP9 1530 aa38.14■■■■□ 3.7
PDXK-206ENST00000398085 FHAD1B1AJZ9 1412 aa38.12■■■■□ 3.69
PDXK-206ENST00000398085 NUP160Q12769 1436 aa38.04■■■■□ 3.68
PDXK-206ENST00000398085 CEP170Q5SW79 1584 aa37.99■■■■□ 3.67
PDXK-206ENST00000398085 TRHP20396 242 aaPredicted RBP37.82■■■■□ 3.64
PDXK-206ENST00000398085 SHROOM2Q13796 1616 aa37.82■■■■□ 3.64
PDXK-206ENST00000398085 ERCC6L2Q5T890 1561 aa37.81■■■■□ 3.64
PDXK-206ENST00000398085 KIF27Q86VH2 1401 aa37.79■■■■□ 3.64
PDXK-206ENST00000398085 IGF1RP08069 1367 aa37.77■■■■□ 3.64
PDXK-206ENST00000398085 JPH4Q96JJ6 628 aa37.68■■■■□ 3.62
PDXK-206ENST00000398085 CUL7Q14999 1698 aa37.64■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms