RNA–Protein interactions for RNA: ENST00000453698.5

SNHG11-213, Transcript of small nucleolar RNA host gene 11, humanhuman

TSL 5

Gene SNHG11, Length 1,322 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG11-213ENST00000453698 NISCHQ9Y2I1 1504 aa43.25■■■■■ 4.51
SNHG11-213ENST00000453698 CCDC180Q9P1Z9 1646 aa38.54■■■■□ 3.76
SNHG11-213ENST00000453698 ABCC9O60706 1549 aa37.91■■■■□ 3.66
SNHG11-213ENST00000453698 RB1CC1Q8TDY2 1594 aa36.38■■■■□ 3.41
SNHG11-213ENST00000453698 NACADO15069 1562 aa36.3■■■■□ 3.4
SNHG11-213ENST00000453698 DCAF8L2P0C7V8 631 aa36.12■■■■□ 3.37
SNHG11-213ENST00000453698 MYO15BQ96JP2 1530 aa36.06■■■■□ 3.36
SNHG11-213ENST00000453698 ZCCHC6Q5VYS8 1495 aaKnown RBP35.98■■■■□ 3.35
SNHG11-213ENST00000453698 DCAF1Q9Y4B6 1507 aa35.81■■■■□ 3.32
SNHG11-213ENST00000453698 UNC13AQ9UPW8 1703 aa35.55■■■■□ 3.28
SNHG11-213ENST00000453698 PABPN1Q86U42 306 aaKnown RBP eCLIP35.39■■■■□ 3.26
SNHG11-213ENST00000453698 BICRAQ9NZM4 1560 aa35.34■■■■□ 3.25
SNHG11-213ENST00000453698 SCRIBQ14160 1630 aa35.11■■■■□ 3.21
SNHG11-213ENST00000453698 DNAJC5BQ9UF47 199 aa35.08■■■■□ 3.21
SNHG11-213ENST00000453698 SHROOM4Q9ULL8 1493 aa34.94■■■■□ 3.18
SNHG11-213ENST00000453698 EIF4G1Q04637 1599 aaKnown RBP34.39■■■■□ 3.1
SNHG11-213ENST00000453698 CC2D2AQ9P2K1 1620 aa34.3■■■■□ 3.08
SNHG11-213ENST00000453698 CECR2Q9BXF3 1484 aa34.1■■■■□ 3.05
SNHG11-213ENST00000453698 SMARCA4P51532 1647 aa33.6■■■□□ 2.97
SNHG11-213ENST00000453698 NCAPD3P42695 1498 aa33.53■■■□□ 2.96
SNHG11-213ENST00000453698 BAZ1AQ9NRL2 1556 aaPredicted RBP33.51■■■□□ 2.96
SNHG11-213ENST00000453698 ATAD2BQ9ULI0 1458 aa33.49■■■□□ 2.95
SNHG11-213ENST00000453698 SMARCA2P51531 1590 aa33.42■■■□□ 2.94
SNHG11-213ENST00000453698 MROH2BQ7Z745 1585 aa33.32■■■□□ 2.93
SNHG11-213ENST00000453698 HMGXB3Q12766 1538 aa33.32■■■□□ 2.93
SNHG11-213ENST00000453698 PEG3Q9GZU2 1588 aa33.31■■■□□ 2.92
SNHG11-213ENST00000453698 BAZ1BQ9UIG0 1483 aaKnown RBP33.16■■■□□ 2.9
SNHG11-213ENST00000453698 WIZO95785 1651 aa32.92■■■□□ 2.86
SNHG11-213ENST00000453698 RSF1Q96T23 1441 aaPredicted RBP32.87■■■□□ 2.85
SNHG11-213ENST00000453698 NESP48681 1621 aa32.76■■■□□ 2.83
SNHG11-213ENST00000453698 ERCC6Q03468 1493 aa32.66■■■□□ 2.82
SNHG11-213ENST00000453698 LAMC3Q9Y6N6 1575 aa32.65■■■□□ 2.82
SNHG11-213ENST00000453698 TOP2AP11388 1531 aaKnown RBP32.57■■■□□ 2.81
SNHG11-213ENST00000453698 CADPSQ9ULU8 1353 aa32.51■■■□□ 2.8
SNHG11-213ENST00000453698 CUX2O14529 1486 aa32.47■■■□□ 2.79
SNHG11-213ENST00000453698 PDS5BQ9NTI5 1447 aa32.42■■■□□ 2.78
SNHG11-213ENST00000453698 KIF21AQ7Z4S6 1674 aa32.35■■■□□ 2.77
SNHG11-213ENST00000453698 THOC2Q8NI27 1593 aaKnown RBP32.33■■■□□ 2.77
SNHG11-213ENST00000453698 CFTRP13569 1480 aa32.29■■■□□ 2.76
SNHG11-213ENST00000453698 CCDC88BA6NC98 1476 aa32.21■■■□□ 2.75
SNHG11-213ENST00000453698 FANCD2Q9BXW9 1451 aa32.12■■■□□ 2.73
SNHG11-213ENST00000453698 MRC2Q9UBG0 1479 aa32.12■■■□□ 2.73
SNHG11-213ENST00000453698 CEP164Q9UPV0 1460 aa32.1■■■□□ 2.73
SNHG11-213ENST00000453698 WDR62O43379 1518 aa32.03■■■□□ 2.72
SNHG11-213ENST00000453698 PRDM2Q13029 1718 aa31.96■■■□□ 2.71
SNHG11-213ENST00000453698 DNAJC5Q9H3Z4 198 aa31.95■■■□□ 2.7
SNHG11-213ENST00000453698 URB2Q14146 1524 aaKnown RBP31.84■■■□□ 2.69
SNHG11-213ENST00000453698 SUPT5HO00267 1087 aaKnown RBP31.76■■■□□ 2.68
SNHG11-213ENST00000453698 TOPBP1Q92547 1522 aa31.59■■■□□ 2.65
SNHG11-213ENST00000453698 ABCC8Q09428 1581 aa31.57■■■□□ 2.64
SNHG11-213ENST00000453698 DNMBPQ6XZF7 1577 aa31.53■■■□□ 2.64
SNHG11-213ENST00000453698 IFT140Q96RY7 1462 aa31.45■■■□□ 2.63
SNHG11-213ENST00000453698 ZNF608Q9ULD9 1512 aaPredicted RBP31.34■■■□□ 2.61
SNHG11-213ENST00000453698 POLA1P09884 1462 aaPredicted RBP31.31■■■□□ 2.6
SNHG11-213ENST00000453698 TARBP1Q13395 1621 aaKnown RBP31.29■■■□□ 2.6
SNHG11-213ENST00000453698 CUX1P39880 1505 aa31.28■■■□□ 2.6
SNHG11-213ENST00000453698 FGD5Q6ZNL6 1462 aa31.18■■■□□ 2.58
SNHG11-213ENST00000453698 EIF4G3O43432 1585 aaKnown RBP31.17■■■□□ 2.58
SNHG11-213ENST00000453698 SOGA1O94964 1423 aa31.17■■■□□ 2.58
SNHG11-213ENST00000453698 RAD54L2Q9Y4B4 1467 aa31.17■■■□□ 2.58
SNHG11-213ENST00000453698 AQRO60306 1485 aaKnown RBP eCLIP31.12■■■□□ 2.571e-6■■■■■ 33.8
SNHG11-213ENST00000453698 OSCARQ8IYS5 282 aa31.06■■■□□ 2.56
SNHG11-213ENST00000453698 WDR97A6NE52 1622 aa31.02■■■□□ 2.56
SNHG11-213ENST00000453698 TDRD9Q8NDG6 1382 aaKnown RBP31.02■■■□□ 2.56
SNHG11-213ENST00000453698 WRNQ14191 1432 aaPredicted RBP eCLIP30.97■■■□□ 2.55
SNHG11-213ENST00000453698 TOP2BQ02880 1626 aa30.93■■■□□ 2.54
SNHG11-213ENST00000453698 BIVM-ERCC5R4GMW8 1640 aa30.93■■■□□ 2.54
SNHG11-213ENST00000453698 SYNJ1O43426 1573 aa30.91■■■□□ 2.54
SNHG11-213ENST00000453698 ABCA10Q8WWZ4 1543 aa30.9■■■□□ 2.54
SNHG11-213ENST00000453698 GRIN2BQ13224 1484 aa30.83■■■□□ 2.53
SNHG11-213ENST00000453698 SNAPC4Q5SXM2 1469 aa30.82■■■□□ 2.52
SNHG11-213ENST00000453698 CHD1O14646 1710 aa30.81■■■□□ 2.52
SNHG11-213ENST00000453698 GAPVD1Q14C86 1478 aa30.8■■■□□ 2.52
SNHG11-213ENST00000453698 MAGI1Q96QZ7 1491 aaPredicted RBP30.78■■■□□ 2.52
SNHG11-213ENST00000453698 ABCA5Q8WWZ7 1642 aa30.78■■■□□ 2.52
SNHG11-213ENST00000453698 FBLN2P98095 1184 aa30.73■■■□□ 2.51
SNHG11-213ENST00000453698 PBRM1Q86U86 1689 aa30.72■■■□□ 2.51
SNHG11-213ENST00000453698 SYNJ2O15056 1496 aa30.67■■■□□ 2.5
SNHG11-213ENST00000453698 TRIM41Q8WV44 630 aa30.65■■■□□ 2.5
SNHG11-213ENST00000453698 CHMP7Q8WUX9 453 aaPredicted RBP30.64■■■□□ 2.5
SNHG11-213ENST00000453698 RIMBP3CA6NJZ7 1639 aa30.59■■■□□ 2.49
SNHG11-213ENST00000453698 RIMBP3BA6NNM3 1639 aa30.59■■■□□ 2.49
SNHG11-213ENST00000453698 RIMBP3Q9UFD9 1639 aa30.59■■■□□ 2.49
SNHG11-213ENST00000453698 ARHGEF11O15085 1522 aa30.57■■■□□ 2.48
SNHG11-213ENST00000453698 CLASP1Q7Z460 1538 aa30.53■■■□□ 2.48
SNHG11-213ENST00000453698 ERICH3Q5RHP9 1530 aa30.52■■■□□ 2.48
SNHG11-213ENST00000453698 ADAMTS12P58397 1594 aa30.5■■■□□ 2.47
SNHG11-213ENST00000453698 FHAD1B1AJZ9 1412 aa30.45■■■□□ 2.47
SNHG11-213ENST00000453698 GRIN2AQ12879 1464 aa30.44■■■□□ 2.46
SNHG11-213ENST00000453698 NUP160Q12769 1436 aa30.35■■■□□ 2.45
SNHG11-213ENST00000453698 KIF27Q86VH2 1401 aa30.33■■■□□ 2.45
SNHG11-213ENST00000453698 ARAP1Q96P48 1450 aa30.32■■■□□ 2.44
SNHG11-213ENST00000453698 CEP170Q5SW79 1584 aa30.3■■■□□ 2.44
SNHG11-213ENST00000453698 IGF1RP08069 1367 aa30.28■■■□□ 2.44
SNHG11-213ENST00000453698 CYB5RLQ6IPT4 315 aa30.27■■■□□ 2.44
SNHG11-213ENST00000453698 CUL7Q14999 1698 aa30.16■■■□□ 2.42
SNHG11-213ENST00000453698 SHROOM2Q13796 1616 aa30.13■■■□□ 2.41
SNHG11-213ENST00000453698 ERCC6L2Q5T890 1561 aa30.08■■■□□ 2.41
SNHG11-213ENST00000453698 CARMIL1Q5VZK9 1371 aa30.07■■■□□ 2.4
SNHG11-213ENST00000453698 RUSC2Q8N2Y8 1516 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms