RNA–Protein interactions for RNA: ENST00000622959.3

TMEM175-222, Transcript of transmembrane protein 175, human

TSL 1 (best) BASIC

Gene TMEM175, Length 1,967 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM175-222	ENST00000622959	NISCH	Q9Y2I1	1504 aa		41.51	■■■■■ 4.24
TMEM175-222	ENST00000622959	CCDC180	Q9P1Z9	1646 aa		36.37	■■■■□ 3.41
TMEM175-222	ENST00000622959	ZCCHC6	Q5VYS8	1495 aa	Known RBP	34.8	■■■■□ 3.16
TMEM175-222	ENST00000622959	ABCC9	O60706	1549 aa		34.65	■■■■□ 3.14
TMEM175-222	ENST00000622959	DCAF8L2	P0C7V8	631 aa		34.37	■■■■□ 3.09
TMEM175-222	ENST00000622959	DCAF1	Q9Y4B6	1507 aa		34.35	■■■■□ 3.09
TMEM175-222	ENST00000622959	MYO15B	Q96JP2	1530 aa		34.08	■■■■□ 3.05
TMEM175-222	ENST00000622959	NACAD	O15069	1562 aa		33.96	■■■■□ 3.03
TMEM175-222	ENST00000622959	RB1CC1	Q8TDY2	1594 aa		33.74	■■■□□ 2.99
TMEM175-222	ENST00000622959	SHROOM4	Q9ULL8	1493 aa		33.57	■■■□□ 2.96
TMEM175-222	ENST00000622959	SCRIB	Q14160	1630 aa		33.36	■■■□□ 2.93
TMEM175-222	ENST00000622959	UNC13A	Q9UPW8	1703 aa		33.02	■■■□□ 2.88
TMEM175-222	ENST00000622959	BICRA	Q9NZM4	1560 aa		32.7	■■■□□ 2.83
TMEM175-222	ENST00000622959	PABPN1	Q86U42	306 aa	Known RBP eCLIP	32.61	■■■□□ 2.81
TMEM175-222	ENST00000622959	CECR2	Q9BXF3	1484 aa		32.25	■■■□□ 2.75
TMEM175-222	ENST00000622959	SUPT5H	O00267	1087 aa	Known RBP	32.16	■■■□□ 2.74
TMEM175-222	ENST00000622959	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	32.09	■■■□□ 2.73
TMEM175-222	ENST00000622959	RSF1	Q96T23	1441 aa	Predicted RBP	32.06	■■■□□ 2.72
TMEM175-222	ENST00000622959	MROH2B	Q7Z745	1585 aa		32.04	■■■□□ 2.72
TMEM175-222	ENST00000622959	SMARCA4	P51532	1647 aa		31.98	■■■□□ 2.71
TMEM175-222	ENST00000622959	EIF4G1	Q04637	1599 aa	Known RBP	31.76	■■■□□ 2.67
TMEM175-222	ENST00000622959	WIZ	O95785	1651 aa		31.75	■■■□□ 2.67
TMEM175-222	ENST00000622959	PEG3	Q9GZU2	1588 aa		31.62	■■■□□ 2.65
TMEM175-222	ENST00000622959	ATAD2B	Q9ULI0	1458 aa		31.53	■■■□□ 2.64
TMEM175-222	ENST00000622959	SMARCA2	P51531	1590 aa		31.53	■■■□□ 2.64
TMEM175-222	ENST00000622959	TOP2A	P11388	1531 aa	Known RBP	31.43	■■■□□ 2.62
TMEM175-222	ENST00000622959	CC2D2A	Q9P2K1	1620 aa		31.37	■■■□□ 2.61
TMEM175-222	ENST00000622959	BAZ1B	Q9UIG0	1483 aa	Known RBP	31.34	■■■□□ 2.61
TMEM175-222	ENST00000622959	NCAPD3	P42695	1498 aa		31.34	■■■□□ 2.61
TMEM175-222	ENST00000622959	HMGXB3	Q12766	1538 aa		31.27	■■■□□ 2.6
TMEM175-222	ENST00000622959	CCDC88B	A6NC98	1476 aa		31.1	■■■□□ 2.57
TMEM175-222	ENST00000622959	DNAJC5B	Q9UF47	199 aa		30.85	■■■□□ 2.53
TMEM175-222	ENST00000622959	CHIC1	Q5VXU3	224 aa		30.62	■■■□□ 2.49
TMEM175-222	ENST00000622959	CFTR	P13569	1480 aa		30.55	■■■□□ 2.48
TMEM175-222	ENST00000622959	CADPS	Q9ULU8	1353 aa		30.51	■■■□□ 2.47
TMEM175-222	ENST00000622959	PRDM2	Q13029	1718 aa		30.37	■■■□□ 2.45
TMEM175-222	ENST00000622959	LAMC3	Q9Y6N6	1575 aa		30.33	■■■□□ 2.45
TMEM175-222	ENST00000622959	ABCC8	Q09428	1581 aa		30.32	■■■□□ 2.44
TMEM175-222	ENST00000622959	NES	P48681	1621 aa		30.31	■■■□□ 2.44
TMEM175-222	ENST00000622959	TRIM41	Q8WV44	630 aa		30.29	■■■□□ 2.44
TMEM175-222	ENST00000622959	WRN	Q14191	1432 aa	Predicted RBP eCLIP	30.2	■■■□□ 2.43
TMEM175-222	ENST00000622959	FANCD2	Q9BXW9	1451 aa		30.16	■■■□□ 2.42
TMEM175-222	ENST00000622959	PDS5B	Q9NTI5	1447 aa		30.12	■■■□□ 2.41
TMEM175-222	ENST00000622959	SYNJ1	O43426	1573 aa		30.07	■■■□□ 2.4
TMEM175-222	ENST00000622959	CEP164	Q9UPV0	1460 aa		30.01	■■■□□ 2.39
TMEM175-222	ENST00000622959	TOP2B	Q02880	1626 aa		30	■■■□□ 2.39
TMEM175-222	ENST00000622959	CUX1	P39880	1505 aa		29.98	■■■□□ 2.39
TMEM175-222	ENST00000622959	BIVM-ERCC5	R4GMW8	1640 aa		29.97	■■■□□ 2.39
TMEM175-222	ENST00000622959	KIF21A	Q7Z4S6	1674 aa		29.96	■■■□□ 2.39
TMEM175-222	ENST00000622959	DNMBP	Q6XZF7	1577 aa		29.84	■■■□□ 2.37
TMEM175-222	ENST00000622959	URB2	Q14146	1524 aa	Known RBP	29.79	■■■□□ 2.36
TMEM175-222	ENST00000622959	TOPBP1	Q92547	1522 aa		29.79	■■■□□ 2.36
TMEM175-222	ENST00000622959	ERCC6	Q03468	1493 aa		29.77	■■■□□ 2.36
TMEM175-222	ENST00000622959	MRC2	Q9UBG0	1479 aa		29.73	■■■□□ 2.35
TMEM175-222	ENST00000622959	FGD5	Q6ZNL6	1462 aa		29.71	■■■□□ 2.35
TMEM175-222	ENST00000622959	SOGA1	O94964	1423 aa		29.69	■■■□□ 2.34
TMEM175-222	ENST00000622959	FAM9A	Q8IZU1	332 aa	Predicted RBP	29.68	■■■□□ 2.34
TMEM175-222	ENST00000622959	POLA1	P09884	1462 aa	Predicted RBP	29.63	■■■□□ 2.33
TMEM175-222	ENST00000622959	EEA1	Q15075	1411 aa		29.61	■■■□□ 2.33
TMEM175-222	ENST00000622959	WDR62	O43379	1518 aa		29.59	■■■□□ 2.33
TMEM175-222	ENST00000622959	RUSC2	Q8N2Y8	1516 aa		29.58	■■■□□ 2.33
TMEM175-222	ENST00000622959	THOC2	Q8NI27	1593 aa	Known RBP	29.56	■■■□□ 2.32
TMEM175-222	ENST00000622959	RAD54L2	Q9Y4B4	1467 aa		29.51	■■■□□ 2.31
TMEM175-222	ENST00000622959	KIF27	Q86VH2	1401 aa		29.48	■■■□□ 2.31
TMEM175-222	ENST00000622959	ABCA10	Q8WWZ4	1543 aa		29.46	■■■□□ 2.31
TMEM175-222	ENST00000622959	CSRNP3	Q8WYN3	585 aa		29.46	■■■□□ 2.31
TMEM175-222	ENST00000622959	CUX2	O14529	1486 aa		29.46	■■■□□ 2.31
TMEM175-222	ENST00000622959	LOC105371045	A0A1W2PR82	267 aa		29.41	■■■□□ 2.3
TMEM175-222	ENST00000622959	TARBP1	Q13395	1621 aa	Known RBP	29.38	■■■□□ 2.29
TMEM175-222	ENST00000622959	WDR97	A6NE52	1622 aa		29.38	■■■□□ 2.29
TMEM175-222	ENST00000622959	IFT140	Q96RY7	1462 aa		29.32	■■■□□ 2.28
TMEM175-222	ENST00000622959	TDRD9	Q8NDG6	1382 aa	Known RBP	29.26	■■■□□ 2.27
TMEM175-222	ENST00000622959	EHMT2	Q96KQ7	1210 aa		29.25	■■■□□ 2.27
TMEM175-222	ENST00000622959	IGF1R	P08069	1367 aa		29.24	■■■□□ 2.27
TMEM175-222	ENST00000622959	ABCA5	Q8WWZ7	1642 aa		29.24	■■■□□ 2.27
TMEM175-222	ENST00000622959	KIF21B	O75037	1637 aa		29.23	■■■□□ 2.27
TMEM175-222	ENST00000622959	GAPVD1	Q14C86	1478 aa		29.21	■■■□□ 2.27
TMEM175-222	ENST00000622959	PRX	Q9BXM0	1461 aa		29.19	■■■□□ 2.26
TMEM175-222	ENST00000622959	GOLGA3	Q08378	1498 aa		29.17	■■■□□ 2.26
TMEM175-222	ENST00000622959	ZNF608	Q9ULD9	1512 aa	Predicted RBP	29.14	■■■□□ 2.26
TMEM175-222	ENST00000622959	AQR	O60306	1485 aa	Known RBP eCLIP	29.14	■■■□□ 2.25	2e-7	■■■□□ 15
TMEM175-222	ENST00000622959	ERICH3	Q5RHP9	1530 aa		29.12	■■■□□ 2.25
TMEM175-222	ENST00000622959	RAPGEF2	Q9Y4G8	1499 aa		29.11	■■■□□ 2.25
TMEM175-222	ENST00000622959	CARMIL1	Q5VZK9	1371 aa		29.09	■■■□□ 2.25
TMEM175-222	ENST00000622959	UBTF	P17480	764 aa	Known RBP	29.06	■■■□□ 2.24
TMEM175-222	ENST00000622959	CUL7	Q14999	1698 aa		29.06	■■■□□ 2.24
TMEM175-222	ENST00000622959	PBRM1	Q86U86	1689 aa		29.05	■■■□□ 2.24
TMEM175-222	ENST00000622959	EIF4G3	O43432	1585 aa	Known RBP	29.05	■■■□□ 2.24
TMEM175-222	ENST00000622959	GRIN2B	Q13224	1484 aa		29.03	■■■□□ 2.24
TMEM175-222	ENST00000622959	TNIK	Q9UKE5	1360 aa		29.02	■■■□□ 2.24
TMEM175-222	ENST00000622959	FHAD1	B1AJZ9	1412 aa		28.89	■■■□□ 2.21
TMEM175-222	ENST00000622959	ADAMTS12	P58397	1594 aa		28.88	■■■□□ 2.21
TMEM175-222	ENST00000622959	SNAPC4	Q5SXM2	1469 aa		28.86	■■■□□ 2.21
TMEM175-222	ENST00000622959	MAGI1	Q96QZ7	1491 aa	Predicted RBP	28.83	■■■□□ 2.21
TMEM175-222	ENST00000622959	CEP162	Q5TB80	1403 aa		28.82	■■■□□ 2.2
TMEM175-222	ENST00000622959	SYNJ2	O15056	1496 aa		28.72	■■■□□ 2.19
TMEM175-222	ENST00000622959	CLIP1	P30622	1438 aa		28.69	■■■□□ 2.18
TMEM175-222	ENST00000622959	CTTNBP2	Q8WZ74	1663 aa		28.67	■■■□□ 2.18
TMEM175-222	ENST00000622959	CHMP7	Q8WUX9	453 aa	Predicted RBP	28.67	■■■□□ 2.18
TMEM175-222	ENST00000622959	GRIN2A	Q12879	1464 aa		28.67	■■■□□ 2.18

Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms