RNA–Protein interactions for RNA: ENST00000442419.1

SNHG11-210, Transcript of small nucleolar RNA host gene 11, humanhuman

TSL 3

Gene SNHG11, Length 741 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG11-210ENST00000442419 NISCHQ9Y2I1 1504 aa28.6■■■□□ 2.17
SNHG11-210ENST00000442419 ABCC9O60706 1549 aa26.36■■□□□ 1.81
SNHG11-210ENST00000442419 CCDC180Q9P1Z9 1646 aa25.89■■□□□ 1.74
SNHG11-210ENST00000442419 DNAJC5BQ9UF47 199 aa25.2■■□□□ 1.62
SNHG11-210ENST00000442419 RB1CC1Q8TDY2 1594 aa24.92■■□□□ 1.58
SNHG11-210ENST00000442419 NACADO15069 1562 aa24.64■■□□□ 1.54
SNHG11-210ENST00000442419 PABPN1Q86U42 306 aaKnown RBP eCLIP24.45■■□□□ 1.5
SNHG11-210ENST00000442419 DCAF8L2P0C7V8 631 aa24.26■■□□□ 1.47
SNHG11-210ENST00000442419 UNC13AQ9UPW8 1703 aa24.22■■□□□ 1.47
SNHG11-210ENST00000442419 MYO15BQ96JP2 1530 aa24.2■■□□□ 1.46
SNHG11-210ENST00000442419 BICRAQ9NZM4 1560 aa24.18■■□□□ 1.46
SNHG11-210ENST00000442419 SHROOM4Q9ULL8 1493 aa23.94■■□□□ 1.42
SNHG11-210ENST00000442419 CECR2Q9BXF3 1484 aa23.85■■□□□ 1.41
SNHG11-210ENST00000442419 CC2D2AQ9P2K1 1620 aa23.8■■□□□ 1.4
SNHG11-210ENST00000442419 DCAF1Q9Y4B6 1507 aa23.66■■□□□ 1.38
SNHG11-210ENST00000442419 EIF4G1Q04637 1599 aaKnown RBP23.65■■□□□ 1.38
SNHG11-210ENST00000442419 ZCCHC6Q5VYS8 1495 aaKnown RBP23.61■■□□□ 1.37
SNHG11-210ENST00000442419 DNAJC5Q9H3Z4 198 aa23.6■■□□□ 1.37
SNHG11-210ENST00000442419 SCRIBQ14160 1630 aa23.49■■□□□ 1.35
SNHG11-210ENST00000442419 CUX2O14529 1486 aa23.04■■□□□ 1.28
SNHG11-210ENST00000442419 ERCC6Q03468 1493 aa22.83■■□□□ 1.25
SNHG11-210ENST00000442419 NCAPD3P42695 1498 aa22.78■■□□□ 1.24
SNHG11-210ENST00000442419 ATAD2BQ9ULI0 1458 aa22.6■■□□□ 1.21
SNHG11-210ENST00000442419 HMGXB3Q12766 1538 aa22.54■■□□□ 1.2
SNHG11-210ENST00000442419 SMARCA2P51531 1590 aa22.51■■□□□ 1.19
SNHG11-210ENST00000442419 NESP48681 1621 aa22.49■■□□□ 1.19
SNHG11-210ENST00000442419 SMARCA4P51532 1647 aa22.4■■□□□ 1.18
SNHG11-210ENST00000442419 THOC2Q8NI27 1593 aaKnown RBP22.4■■□□□ 1.18
SNHG11-210ENST00000442419 BAZ1BQ9UIG0 1483 aaKnown RBP22.33■■□□□ 1.16
SNHG11-210ENST00000442419 LAMC3Q9Y6N6 1575 aa22.31■■□□□ 1.16
SNHG11-210ENST00000442419 PEG3Q9GZU2 1588 aa22.25■■□□□ 1.15
SNHG11-210ENST00000442419 BAZ1AQ9NRL2 1556 aaPredicted RBP22.25■■□□□ 1.15
SNHG11-210ENST00000442419 TRIM41Q8WV44 630 aa22.25■■□□□ 1.15
SNHG11-210ENST00000442419 PDS5BQ9NTI5 1447 aa22.23■■□□□ 1.15
SNHG11-210ENST00000442419 KIF21AQ7Z4S6 1674 aa22.14■■□□□ 1.14
SNHG11-210ENST00000442419 MRC2Q9UBG0 1479 aa22.04■■□□□ 1.12
SNHG11-210ENST00000442419 CADPSQ9ULU8 1353 aa22.03■■□□□ 1.12
SNHG11-210ENST00000442419 WDR62O43379 1518 aa22.01■■□□□ 1.11
SNHG11-210ENST00000442419 MROH2BQ7Z745 1585 aa21.99■■□□□ 1.11
SNHG11-210ENST00000442419 OSCARQ8IYS5 282 aa21.86■■□□□ 1.09
SNHG11-210ENST00000442419 CEP164Q9UPV0 1460 aa21.83■■□□□ 1.09
SNHG11-210ENST00000442419 FANCD2Q9BXW9 1451 aa21.76■■□□□ 1.07
SNHG11-210ENST00000442419 CFTRP13569 1480 aa21.68■■□□□ 1.06
SNHG11-210ENST00000442419 WIZO95785 1651 aa21.66■■□□□ 1.06
SNHG11-210ENST00000442419 URB2Q14146 1524 aaKnown RBP21.6■■□□□ 1.05
SNHG11-210ENST00000442419 RIMBP3CA6NJZ7 1639 aa21.58■■□□□ 1.04
SNHG11-210ENST00000442419 RIMBP3BA6NNM3 1639 aa21.58■■□□□ 1.04
SNHG11-210ENST00000442419 RIMBP3Q9UFD9 1639 aa21.58■■□□□ 1.04
SNHG11-210ENST00000442419 ARHGEF11O15085 1522 aa21.5■■□□□ 1.03
SNHG11-210ENST00000442419 IFT140Q96RY7 1462 aa21.45■■□□□ 1.03
SNHG11-210ENST00000442419 TOP2AP11388 1531 aaKnown RBP21.43■■□□□ 1.02
SNHG11-210ENST00000442419 ZNF608Q9ULD9 1512 aaPredicted RBP21.4■■□□□ 1.02
SNHG11-210ENST00000442419 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
SNHG11-210ENST00000442419 CYB5RLQ6IPT4 315 aa21.34■■□□□ 1.01
SNHG11-210ENST00000442419 PRDM2Q13029 1718 aa21.31■■□□□ 1
SNHG11-210ENST00000442419 TOPBP1Q92547 1522 aa21.28■■□□□ 1
SNHG11-210ENST00000442419 EIF4G3O43432 1585 aaKnown RBP21.26■□□□□ 0.99
SNHG11-210ENST00000442419 TRHP20396 242 aaPredicted RBP21.25■□□□□ 0.99
SNHG11-210ENST00000442419 ABCC8Q09428 1581 aa21.25■□□□□ 0.99
SNHG11-210ENST00000442419 ARAP1Q96P48 1450 aa21.25■□□□□ 0.99
SNHG11-210ENST00000442419 CHIC1Q5VXU3 224 aa21.17■□□□□ 0.98
SNHG11-210ENST00000442419 CCDC88BA6NC98 1476 aa21.17■□□□□ 0.98
SNHG11-210ENST00000442419 DNMBPQ6XZF7 1577 aa21.16■□□□□ 0.98
SNHG11-210ENST00000442419 AQRO60306 1485 aaKnown RBP eCLIP21.14■□□□□ 0.981e-6■■■■■ 33.8
SNHG11-210ENST00000442419 CHD1O14646 1710 aa21.14■□□□□ 0.97
SNHG11-210ENST00000442419 TARBP1Q13395 1621 aaKnown RBP21.12■□□□□ 0.97
SNHG11-210ENST00000442419 FBLN2P98095 1184 aa21.08■□□□□ 0.97
SNHG11-210ENST00000442419 AEBP2Q6ZN18 517 aaPredicted RBP21.05■□□□□ 0.96
SNHG11-210ENST00000442419 POLA1P09884 1462 aaPredicted RBP21.04■□□□□ 0.96
SNHG11-210ENST00000442419 CLASP1Q7Z460 1538 aa20.99■□□□□ 0.95
SNHG11-210ENST00000442419 WDR97A6NE52 1622 aa20.95■□□□□ 0.94
SNHG11-210ENST00000442419 TDRD9Q8NDG6 1382 aaKnown RBP20.94■□□□□ 0.94
SNHG11-210ENST00000442419 SOGA1O94964 1423 aa20.93■□□□□ 0.94
SNHG11-210ENST00000442419 SNAPC4Q5SXM2 1469 aa20.93■□□□□ 0.94
SNHG11-210ENST00000442419 RAD54L2Q9Y4B4 1467 aa20.93■□□□□ 0.94
SNHG11-210ENST00000442419 SYNJ1O43426 1573 aa20.92■□□□□ 0.94
SNHG11-210ENST00000442419 MAGI1Q96QZ7 1491 aaPredicted RBP20.9■□□□□ 0.94
SNHG11-210ENST00000442419 CHMP7Q8WUX9 453 aaPredicted RBP20.89■□□□□ 0.93
SNHG11-210ENST00000442419 SYNJ2O15056 1496 aa20.83■□□□□ 0.93
SNHG11-210ENST00000442419 GRIN2BQ13224 1484 aa20.83■□□□□ 0.93
SNHG11-210ENST00000442419 FGD5Q6ZNL6 1462 aa20.81■□□□□ 0.92
SNHG11-210ENST00000442419 GAPVD1Q14C86 1478 aa20.8■□□□□ 0.92
SNHG11-210ENST00000442419 CUX1P39880 1505 aa20.7■□□□□ 0.9
SNHG11-210ENST00000442419 PBRM1Q86U86 1689 aa20.61■□□□□ 0.89
SNHG11-210ENST00000442419 SUPT5HO00267 1087 aaKnown RBP20.6■□□□□ 0.89
SNHG11-210ENST00000442419 ABCA10Q8WWZ4 1543 aa20.58■□□□□ 0.89
SNHG11-210ENST00000442419 ABCA5Q8WWZ7 1642 aa20.57■□□□□ 0.88
SNHG11-210ENST00000442419 ERCC6L2Q5T890 1561 aa20.55■□□□□ 0.88
SNHG11-210ENST00000442419 GRIN2AQ12879 1464 aa20.55■□□□□ 0.88
SNHG11-210ENST00000442419 NUP160Q12769 1436 aa20.53■□□□□ 0.88
SNHG11-210ENST00000442419 CEP170Q5SW79 1584 aa20.51■□□□□ 0.87
SNHG11-210ENST00000442419 SHROOM2Q13796 1616 aa20.46■□□□□ 0.87
SNHG11-210ENST00000442419 ADAMTS12P58397 1594 aa20.46■□□□□ 0.87
SNHG11-210ENST00000442419 FHAD1B1AJZ9 1412 aa20.41■□□□□ 0.86
SNHG11-210ENST00000442419 KIF13AQ9H1H9 1805 aa20.41■□□□□ 0.86
SNHG11-210ENST00000442419 WRNQ14191 1432 aaPredicted RBP eCLIP20.4■□□□□ 0.86
SNHG11-210ENST00000442419 ABCC10Q5T3U5 1492 aa20.35■□□□□ 0.85
SNHG11-210ENST00000442419 PRG4Q92954 1404 aaPredicted RBP20.34■□□□□ 0.85
SNHG11-210ENST00000442419 ERICH3Q5RHP9 1530 aa20.32■□□□□ 0.84
SNHG11-210ENST00000442419 FAM69CQ0P6D2 419 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms