Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PDLIM5Q96HC4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.25■■□□□ 1.15
PDLIM5Q96HC4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.25■■□□□ 1.15
PDLIM5Q96HC4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.25■■□□□ 1.15
PDLIM5Q96HC4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PDLIM5Q96HC4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDLIM5Q96HC4 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.24■■□□□ 1.15
PDLIM5Q96HC4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.24■■□□□ 1.15
PDLIM5Q96HC4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.24■■□□□ 1.15
PDLIM5Q96HC4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDLIM5Q96HC4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDLIM5Q96HC4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDLIM5Q96HC4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
PDLIM5Q96HC4 DUSP8P3-201ENST00000399571 1760 ntBASIC22.23■■□□□ 1.15
PDLIM5Q96HC4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDLIM5Q96HC4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.23■■□□□ 1.15
PDLIM5Q96HC4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PDLIM5Q96HC4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDLIM5Q96HC4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.23■■□□□ 1.15
PDLIM5Q96HC4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDLIM5Q96HC4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 BX664725.1-201ENST00000438252 379 ntBASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 MIR6722-201ENST00000617286 78 ntBASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 AC012676.1-201ENST00000574705 1949 ntBASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 AC068473.5-201ENST00000616428 2072 ntBASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDLIM5Q96HC4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.2■■□□□ 1.14
PDLIM5Q96HC4 Z92544.1-202ENST00000571933 1220 ntBASIC22.2■■□□□ 1.14
PDLIM5Q96HC4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.2■■□□□ 1.14
PDLIM5Q96HC4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.2■■□□□ 1.14
PDLIM5Q96HC4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
PDLIM5Q96HC4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.2■■□□□ 1.14
PDLIM5Q96HC4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PDLIM5Q96HC4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
PDLIM5Q96HC4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.19■■□□□ 1.14
PDLIM5Q96HC4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDLIM5Q96HC4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
PDLIM5Q96HC4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.19■■□□□ 1.14
PDLIM5Q96HC4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
PDLIM5Q96HC4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDLIM5Q96HC4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
PDLIM5Q96HC4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
PDLIM5Q96HC4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.19■■□□□ 1.14
PDLIM5Q96HC4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 RARRES2P1-201ENST00000474487 481 ntBASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
PDLIM5Q96HC4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDLIM5Q96HC4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDLIM5Q96HC4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDLIM5Q96HC4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.17■■□□□ 1.14
PDLIM5Q96HC4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.17■■□□□ 1.14
PDLIM5Q96HC4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.17■■□□□ 1.14
PDLIM5Q96HC4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
PDLIM5Q96HC4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDLIM5Q96HC4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PDLIM5Q96HC4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.17■■□□□ 1.14
PDLIM5Q96HC4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms