Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PDLIM5Q96HC4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.25■■□□□ 1.15
PDLIM5Q96HC4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.25■■□□□ 1.15
PDLIM5Q96HC4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.25■■□□□ 1.15
PDLIM5Q96HC4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PDLIM5Q96HC4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDLIM5Q96HC4 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.24■■□□□ 1.15
PDLIM5Q96HC4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.24■■□□□ 1.15
PDLIM5Q96HC4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.24■■□□□ 1.15
PDLIM5Q96HC4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDLIM5Q96HC4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDLIM5Q96HC4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDLIM5Q96HC4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
PDLIM5Q96HC4 DUSP8P3-201ENST00000399571 1760 ntBASIC22.23■■□□□ 1.15
PDLIM5Q96HC4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDLIM5Q96HC4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.23■■□□□ 1.15
PDLIM5Q96HC4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PDLIM5Q96HC4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDLIM5Q96HC4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.23■■□□□ 1.15
PDLIM5Q96HC4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDLIM5Q96HC4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 BX664725.1-201ENST00000438252 379 ntBASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 MIR6722-201ENST00000617286 78 ntBASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
PDLIM5Q96HC4 AC012676.1-201ENST00000574705 1949 ntBASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 AC068473.5-201ENST00000616428 2072 ntBASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PDLIM5Q96HC4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDLIM5Q96HC4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.2■■□□□ 1.14
PDLIM5Q96HC4 Z92544.1-202ENST00000571933 1220 ntBASIC22.2■■□□□ 1.14
PDLIM5Q96HC4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.2■■□□□ 1.14
PDLIM5Q96HC4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.2■■□□□ 1.14
PDLIM5Q96HC4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
PDLIM5Q96HC4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.2■■□□□ 1.14
PDLIM5Q96HC4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PDLIM5Q96HC4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
PDLIM5Q96HC4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.19■■□□□ 1.14
PDLIM5Q96HC4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDLIM5Q96HC4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
PDLIM5Q96HC4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.19■■□□□ 1.14
PDLIM5Q96HC4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
PDLIM5Q96HC4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDLIM5Q96HC4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
PDLIM5Q96HC4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
PDLIM5Q96HC4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.19■■□□□ 1.14
PDLIM5Q96HC4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 RARRES2P1-201ENST00000474487 481 ntBASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDLIM5Q96HC4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
PDLIM5Q96HC4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDLIM5Q96HC4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDLIM5Q96HC4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDLIM5Q96HC4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.17■■□□□ 1.14
PDLIM5Q96HC4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.17■■□□□ 1.14
PDLIM5Q96HC4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.17■■□□□ 1.14
PDLIM5Q96HC4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
PDLIM5Q96HC4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDLIM5Q96HC4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PDLIM5Q96HC4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.17■■□□□ 1.14
PDLIM5Q96HC4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDLIM5Q96HC4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 158.3 ms