Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC15.58■□□□□ 0.08
ALMS1Q8TCU4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC15.58■□□□□ 0.08
ALMS1Q8TCU4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.58■□□□□ 0.08
ALMS1Q8TCU4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC15.58■□□□□ 0.08
ALMS1Q8TCU4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
ALMS1Q8TCU4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ALMS1Q8TCU4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ALMS1Q8TCU4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC15.58■□□□□ 0.08
ALMS1Q8TCU4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ALMS1Q8TCU4 GUSBP6-202ENST00000438529 1198 ntBASIC15.57■□□□□ 0.08
ALMS1Q8TCU4 AP005435.1-201ENST00000529293 1178 ntBASIC15.57■□□□□ 0.08
ALMS1Q8TCU4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.57■□□□□ 0.08
ALMS1Q8TCU4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ALMS1Q8TCU4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.57■□□□□ 0.08
ALMS1Q8TCU4 AC092171.4-201ENST00000609130 632 ntBASIC15.57■□□□□ 0.08
ALMS1Q8TCU4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ALMS1Q8TCU4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ALMS1Q8TCU4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ALMS1Q8TCU4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.57■□□□□ 0.08
ALMS1Q8TCU4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
ALMS1Q8TCU4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.57■□□□□ 0.08
ALMS1Q8TCU4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ALMS1Q8TCU4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ALMS1Q8TCU4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC15.56■□□□□ 0.08
ALMS1Q8TCU4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
ALMS1Q8TCU4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ALMS1Q8TCU4 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.56■□□□□ 0.08
ALMS1Q8TCU4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.56■□□□□ 0.08
ALMS1Q8TCU4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ALMS1Q8TCU4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ALMS1Q8TCU4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ALMS1Q8TCU4 MIR572-201ENST00000384983 95 ntBASIC15.56■□□□□ 0.08
ALMS1Q8TCU4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.56■□□□□ 0.08
ALMS1Q8TCU4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC15.56■□□□□ 0.08
ALMS1Q8TCU4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.56■□□□□ 0.08
ALMS1Q8TCU4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ALMS1Q8TCU4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC15.56■□□□□ 0.08
ALMS1Q8TCU4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
ALMS1Q8TCU4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.55■□□□□ 0.08
ALMS1Q8TCU4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.55■□□□□ 0.08
ALMS1Q8TCU4 AL355802.2-201ENST00000402069 882 ntBASIC15.55■□□□□ 0.08
ALMS1Q8TCU4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ALMS1Q8TCU4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.55■□□□□ 0.08
ALMS1Q8TCU4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC15.55■□□□□ 0.08
ALMS1Q8TCU4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ALMS1Q8TCU4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC15.55■□□□□ 0.08
ALMS1Q8TCU4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ALMS1Q8TCU4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC15.55■□□□□ 0.08
ALMS1Q8TCU4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
ALMS1Q8TCU4 AC009086.3-201ENST00000623486 1008 ntBASIC15.54■□□□□ 0.08
ALMS1Q8TCU4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ALMS1Q8TCU4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ALMS1Q8TCU4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
ALMS1Q8TCU4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.54■□□□□ 0.08
ALMS1Q8TCU4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.54■□□□□ 0.08
ALMS1Q8TCU4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC15.54■□□□□ 0.08
ALMS1Q8TCU4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.54■□□□□ 0.08
ALMS1Q8TCU4 ERN1-208ENST00000606895 2068 ntBASIC15.54■□□□□ 0.08
ALMS1Q8TCU4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ALMS1Q8TCU4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ALMS1Q8TCU4 NT5C3AP1-201ENST00000394500 1012 ntBASIC15.54■□□□□ 0.08
ALMS1Q8TCU4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ALMS1Q8TCU4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ALMS1Q8TCU4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC15.54■□□□□ 0.08
ALMS1Q8TCU4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC15.54■□□□□ 0.08
ALMS1Q8TCU4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
ALMS1Q8TCU4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC15.54■□□□□ 0.08
ALMS1Q8TCU4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
ALMS1Q8TCU4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ALMS1Q8TCU4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.54■□□□□ 0.08
ALMS1Q8TCU4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
ALMS1Q8TCU4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC15.53■□□□□ 0.08
ALMS1Q8TCU4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.53■□□□□ 0.08
ALMS1Q8TCU4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ALMS1Q8TCU4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
ALMS1Q8TCU4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
ALMS1Q8TCU4 AC097639.1-201ENST00000565519 1891 ntBASIC15.53■□□□□ 0.08
ALMS1Q8TCU4 AC241377.3-202ENST00000626088 1088 ntBASIC15.53■□□□□ 0.08
ALMS1Q8TCU4 AC241585.3-202ENST00000628937 1088 ntBASIC15.53■□□□□ 0.08
ALMS1Q8TCU4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ALMS1Q8TCU4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ALMS1Q8TCU4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.53■□□□□ 0.08
ALMS1Q8TCU4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ALMS1Q8TCU4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ALMS1Q8TCU4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC15.52■□□□□ 0.08
ALMS1Q8TCU4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.52■□□□□ 0.08
ALMS1Q8TCU4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
ALMS1Q8TCU4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
ALMS1Q8TCU4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ALMS1Q8TCU4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
ALMS1Q8TCU4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
ALMS1Q8TCU4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC15.52■□□□□ 0.08
ALMS1Q8TCU4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC15.52■□□□□ 0.08
ALMS1Q8TCU4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ALMS1Q8TCU4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC15.52■□□□□ 0.08
ALMS1Q8TCU4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ALMS1Q8TCU4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ALMS1Q8TCU4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
ALMS1Q8TCU4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ALMS1Q8TCU4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms