Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNAI3Q3KNW1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
SNAI3Q3KNW1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 C9orf163-202ENST00000624034 2573 ntBASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNAI3Q3KNW1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 BX664725.1-201ENST00000438252 379 ntBASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 AC021242.3-201ENST00000607598 1377 ntBASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNAI3Q3KNW1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 AC133561.1-201ENST00000568600 2415 ntBASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 AC092068.2-201ENST00000590491 1708 ntBASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI3Q3KNW1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.64■□□□□ 0.74
SNAI3Q3KNW1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.74
SNAI3Q3KNW1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.64■□□□□ 0.73
SNAI3Q3KNW1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 AC068473.5-201ENST00000616428 2072 ntBASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNAI3Q3KNW1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI3Q3KNW1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SNAI3Q3KNW1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNAI3Q3KNW1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SNAI3Q3KNW1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.61■□□□□ 0.73
SNAI3Q3KNW1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.61■□□□□ 0.73
SNAI3Q3KNW1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNAI3Q3KNW1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.61■□□□□ 0.73
SNAI3Q3KNW1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNAI3Q3KNW1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNAI3Q3KNW1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.61■□□□□ 0.73
SNAI3Q3KNW1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms