Protein–RNA interactions for Protein: Q16394

EXT1, Exostosin-1, humanhuman

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1Q16394 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.04■□□□□ 0.96
EXT1Q16394 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.04■□□□□ 0.96
EXT1Q16394 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXT1Q16394 SYT6-210ENST00000641643 1587 ntBASIC21.04■□□□□ 0.96
EXT1Q16394 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXT1Q16394 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.04■□□□□ 0.96
EXT1Q16394 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXT1Q16394 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXT1Q16394 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.04■□□□□ 0.96
EXT1Q16394 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.04■□□□□ 0.96
EXT1Q16394 AC135279.3-201ENST00000610945 1311 ntBASIC21.04■□□□□ 0.96
EXT1Q16394 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.03■□□□□ 0.96
EXT1Q16394 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EXT1Q16394 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
EXT1Q16394 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EXT1Q16394 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EXT1Q16394 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
EXT1Q16394 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.03■□□□□ 0.96
EXT1Q16394 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.03■□□□□ 0.96
EXT1Q16394 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EXT1Q16394 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EXT1Q16394 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
EXT1Q16394 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EXT1Q16394 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
EXT1Q16394 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
EXT1Q16394 AC099791.2-201ENST00000605725 427 ntBASIC21.02■□□□□ 0.96
EXT1Q16394 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.02■□□□□ 0.96
EXT1Q16394 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
EXT1Q16394 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
EXT1Q16394 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
EXT1Q16394 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EXT1Q16394 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.01■□□□□ 0.95
EXT1Q16394 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.01■□□□□ 0.95
EXT1Q16394 AC005837.3-201ENST00000612163 286 ntBASIC21.01■□□□□ 0.95
EXT1Q16394 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
EXT1Q16394 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EXT1Q16394 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EXT1Q16394 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21■□□□□ 0.95
EXT1Q16394 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
EXT1Q16394 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
EXT1Q16394 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21■□□□□ 0.95
EXT1Q16394 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21■□□□□ 0.95
EXT1Q16394 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EXT1Q16394 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
EXT1Q16394 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
EXT1Q16394 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21■□□□□ 0.95
EXT1Q16394 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21■□□□□ 0.95
EXT1Q16394 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EXT1Q16394 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21■□□□□ 0.95
EXT1Q16394 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21■□□□□ 0.95
EXT1Q16394 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
EXT1Q16394 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EXT1Q16394 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
EXT1Q16394 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EXT1Q16394 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
EXT1Q16394 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EXT1Q16394 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.99■□□□□ 0.95
EXT1Q16394 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.99■□□□□ 0.95
EXT1Q16394 AL138724.1-201ENST00000606771 1088 ntBASIC20.99■□□□□ 0.95
EXT1Q16394 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EXT1Q16394 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EXT1Q16394 LINC00543-201ENST00000567234 1845 ntBASIC20.99■□□□□ 0.95
EXT1Q16394 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
EXT1Q16394 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EXT1Q16394 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.98■□□□□ 0.95
EXT1Q16394 AC024257.2-201ENST00000549699 147 ntBASIC20.98■□□□□ 0.95
EXT1Q16394 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EXT1Q16394 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EXT1Q16394 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EXT1Q16394 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
EXT1Q16394 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EXT1Q16394 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EXT1Q16394 EDA-201ENST00000338901 1233 ntBASIC20.97■□□□□ 0.95
EXT1Q16394 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
EXT1Q16394 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.97■□□□□ 0.95
EXT1Q16394 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.96■□□□□ 0.95
EXT1Q16394 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EXT1Q16394 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
EXT1Q16394 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
EXT1Q16394 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.96■□□□□ 0.95
EXT1Q16394 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EXT1Q16394 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EXT1Q16394 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EXT1Q16394 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.96■□□□□ 0.95
EXT1Q16394 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.96■□□□□ 0.95
EXT1Q16394 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.96■□□□□ 0.95
EXT1Q16394 AC009086.3-201ENST00000623486 1008 ntBASIC20.96■□□□□ 0.95
EXT1Q16394 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EXT1Q16394 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EXT1Q16394 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.95■□□□□ 0.94
EXT1Q16394 LINC01124-201ENST00000409786 2117 ntBASIC20.95■□□□□ 0.94
EXT1Q16394 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EXT1Q16394 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.95■□□□□ 0.94
EXT1Q16394 SERBP1P1-201ENST00000396021 1160 ntBASIC20.95■□□□□ 0.94
EXT1Q16394 AC011298.3-201ENST00000615796 283 ntBASIC20.95■□□□□ 0.94
EXT1Q16394 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
EXT1Q16394 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EXT1Q16394 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
EXT1Q16394 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EXT1Q16394 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms