Protein–RNA interactions for Protein: Q9UJJ7

RPUSD1, RNA pseudouridylate synthase domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1Q9UJJ7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.93■□□□□ 0.62
RPUSD1Q9UJJ7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RPUSD1Q9UJJ7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.93■□□□□ 0.62
RPUSD1Q9UJJ7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RPUSD1Q9UJJ7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPUSD1Q9UJJ7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.93■□□□□ 0.62
RPUSD1Q9UJJ7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPUSD1Q9UJJ7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RPUSD1Q9UJJ7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.92■□□□□ 0.62
RPUSD1Q9UJJ7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.92■□□□□ 0.62
RPUSD1Q9UJJ7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.92■□□□□ 0.62
RPUSD1Q9UJJ7 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.92■□□□□ 0.62
RPUSD1Q9UJJ7 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.92■□□□□ 0.62
RPUSD1Q9UJJ7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPUSD1Q9UJJ7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RPUSD1Q9UJJ7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPUSD1Q9UJJ7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.91■□□□□ 0.62
RPUSD1Q9UJJ7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPUSD1Q9UJJ7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPUSD1Q9UJJ7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.91■□□□□ 0.62
RPUSD1Q9UJJ7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.91■□□□□ 0.62
RPUSD1Q9UJJ7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPUSD1Q9UJJ7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPUSD1Q9UJJ7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPUSD1Q9UJJ7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.9■□□□□ 0.62
RPUSD1Q9UJJ7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPUSD1Q9UJJ7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPUSD1Q9UJJ7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPUSD1Q9UJJ7 AL117332.1-201ENST00000622628 974 ntBASIC18.9■□□□□ 0.62
RPUSD1Q9UJJ7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPUSD1Q9UJJ7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.9■□□□□ 0.62
RPUSD1Q9UJJ7 AC005703.6-201ENST00000623265 1329 ntBASIC18.9■□□□□ 0.62
RPUSD1Q9UJJ7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPUSD1Q9UJJ7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPUSD1Q9UJJ7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.89■□□□□ 0.62
RPUSD1Q9UJJ7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.89■□□□□ 0.62
RPUSD1Q9UJJ7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.89■□□□□ 0.61
RPUSD1Q9UJJ7 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.89■□□□□ 0.61
RPUSD1Q9UJJ7 MIR3621-201ENST00000580529 85 ntBASIC18.89■□□□□ 0.61
RPUSD1Q9UJJ7 AL356740.2-201ENST00000601559 647 ntBASIC18.89■□□□□ 0.61
RPUSD1Q9UJJ7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPUSD1Q9UJJ7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPUSD1Q9UJJ7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPUSD1Q9UJJ7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
RPUSD1Q9UJJ7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.88■□□□□ 0.61
RPUSD1Q9UJJ7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RPUSD1Q9UJJ7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPUSD1Q9UJJ7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.88■□□□□ 0.61
RPUSD1Q9UJJ7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPUSD1Q9UJJ7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPUSD1Q9UJJ7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPUSD1Q9UJJ7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPUSD1Q9UJJ7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPUSD1Q9UJJ7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPUSD1Q9UJJ7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPUSD1Q9UJJ7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPUSD1Q9UJJ7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPUSD1Q9UJJ7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPUSD1Q9UJJ7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
RPUSD1Q9UJJ7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RPUSD1Q9UJJ7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RPUSD1Q9UJJ7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.87■□□□□ 0.61
RPUSD1Q9UJJ7 ABCB10P4-201ENST00000566803 2184 ntBASIC18.87■□□□□ 0.61
RPUSD1Q9UJJ7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RPUSD1Q9UJJ7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RPUSD1Q9UJJ7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RPUSD1Q9UJJ7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPUSD1Q9UJJ7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPUSD1Q9UJJ7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPUSD1Q9UJJ7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPUSD1Q9UJJ7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.86■□□□□ 0.61
RPUSD1Q9UJJ7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.86■□□□□ 0.61
RPUSD1Q9UJJ7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.86■□□□□ 0.61
RPUSD1Q9UJJ7 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.86■□□□□ 0.61
RPUSD1Q9UJJ7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.86■□□□□ 0.61
RPUSD1Q9UJJ7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPUSD1Q9UJJ7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPUSD1Q9UJJ7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPUSD1Q9UJJ7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPUSD1Q9UJJ7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.85■□□□□ 0.61
RPUSD1Q9UJJ7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.85■□□□□ 0.61
RPUSD1Q9UJJ7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.85■□□□□ 0.61
RPUSD1Q9UJJ7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.85■□□□□ 0.61
RPUSD1Q9UJJ7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPUSD1Q9UJJ7 ALDH1A3-203ENST00000557963 1670 ntBASIC18.85■□□□□ 0.61
RPUSD1Q9UJJ7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPUSD1Q9UJJ7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.85■□□□□ 0.61
RPUSD1Q9UJJ7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPUSD1Q9UJJ7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPUSD1Q9UJJ7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RPUSD1Q9UJJ7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RPUSD1Q9UJJ7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.84■□□□□ 0.61
RPUSD1Q9UJJ7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPUSD1Q9UJJ7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.84■□□□□ 0.61
RPUSD1Q9UJJ7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.84■□□□□ 0.61
RPUSD1Q9UJJ7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.84■□□□□ 0.61
RPUSD1Q9UJJ7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.84■□□□□ 0.61
RPUSD1Q9UJJ7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPUSD1Q9UJJ7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.84■□□□□ 0.61
RPUSD1Q9UJJ7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms