Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH20Q9HBT6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CDH20Q9HBT6 AC093323.1-202ENST00000635031 2045 ntBASIC19.86■□□□□ 0.77
CDH20Q9HBT6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
CDH20Q9HBT6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH20Q9HBT6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH20Q9HBT6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH20Q9HBT6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.85■□□□□ 0.77
CDH20Q9HBT6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.85■□□□□ 0.77
CDH20Q9HBT6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.85■□□□□ 0.77
CDH20Q9HBT6 UNC93B8-201ENST00000511903 705 ntBASIC19.85■□□□□ 0.77
CDH20Q9HBT6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CDH20Q9HBT6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH20Q9HBT6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.85■□□□□ 0.77
CDH20Q9HBT6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.85■□□□□ 0.77
CDH20Q9HBT6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDH20Q9HBT6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH20Q9HBT6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CDH20Q9HBT6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH20Q9HBT6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH20Q9HBT6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.84■□□□□ 0.77
CDH20Q9HBT6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH20Q9HBT6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH20Q9HBT6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH20Q9HBT6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH20Q9HBT6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.84■□□□□ 0.77
CDH20Q9HBT6 MIR6722-201ENST00000617286 78 ntBASIC19.84■□□□□ 0.77
CDH20Q9HBT6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDH20Q9HBT6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH20Q9HBT6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CDH20Q9HBT6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH20Q9HBT6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.83■□□□□ 0.77
CDH20Q9HBT6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CDH20Q9HBT6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDH20Q9HBT6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDH20Q9HBT6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDH20Q9HBT6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDH20Q9HBT6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
CDH20Q9HBT6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.82■□□□□ 0.76
CDH20Q9HBT6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.82■□□□□ 0.76
CDH20Q9HBT6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CDH20Q9HBT6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.82■□□□□ 0.76
CDH20Q9HBT6 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.82■□□□□ 0.76
CDH20Q9HBT6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.82■□□□□ 0.76
CDH20Q9HBT6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH20Q9HBT6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.82■□□□□ 0.76
CDH20Q9HBT6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CDH20Q9HBT6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH20Q9HBT6 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.82■□□□□ 0.76
CDH20Q9HBT6 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.82■□□□□ 0.76
CDH20Q9HBT6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDH20Q9HBT6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH20Q9HBT6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CDH20Q9HBT6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CDH20Q9HBT6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CDH20Q9HBT6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.81■□□□□ 0.76
CDH20Q9HBT6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDH20Q9HBT6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH20Q9HBT6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.81■□□□□ 0.76
CDH20Q9HBT6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDH20Q9HBT6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDH20Q9HBT6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDH20Q9HBT6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDH20Q9HBT6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH20Q9HBT6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH20Q9HBT6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.8■□□□□ 0.76
CDH20Q9HBT6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.8■□□□□ 0.76
CDH20Q9HBT6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.8■□□□□ 0.76
CDH20Q9HBT6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH20Q9HBT6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH20Q9HBT6 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.8■□□□□ 0.76
CDH20Q9HBT6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH20Q9HBT6 ALDH1A3-203ENST00000557963 1670 ntBASIC19.8■□□□□ 0.76
CDH20Q9HBT6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDH20Q9HBT6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDH20Q9HBT6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH20Q9HBT6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH20Q9HBT6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH20Q9HBT6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH20Q9HBT6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDH20Q9HBT6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.79■□□□□ 0.76
CDH20Q9HBT6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH20Q9HBT6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDH20Q9HBT6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH20Q9HBT6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH20Q9HBT6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.79■□□□□ 0.76
CDH20Q9HBT6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH20Q9HBT6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.78■□□□□ 0.76
CDH20Q9HBT6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH20Q9HBT6 AC005703.6-201ENST00000623265 1329 ntBASIC19.78■□□□□ 0.76
CDH20Q9HBT6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH20Q9HBT6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
CDH20Q9HBT6 AL356441.2-201ENST00000443009 864 ntBASIC19.78■□□□□ 0.76
CDH20Q9HBT6 MIR6724-1-201ENST00000616420 92 ntBASIC19.78■□□□□ 0.76
CDH20Q9HBT6 MIR6724-2-201ENST00000616483 92 ntBASIC19.78■□□□□ 0.76
CDH20Q9HBT6 MIR6724-4-201ENST00000617390 92 ntBASIC19.78■□□□□ 0.76
CDH20Q9HBT6 MIR6724-3-201ENST00000622482 92 ntBASIC19.78■□□□□ 0.76
CDH20Q9HBT6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CDH20Q9HBT6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH20Q9HBT6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms