Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SCUBE3Q8IX30 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.01■■□□□ 1.43
SCUBE3Q8IX30 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.01■■□□□ 1.43
SCUBE3Q8IX30 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SCUBE3Q8IX30 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.01■■□□□ 1.43
SCUBE3Q8IX30 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SCUBE3Q8IX30 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24■■□□□ 1.43
SCUBE3Q8IX30 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SCUBE3Q8IX30 KRT16P3-201ENST00000439127 1283 ntBASIC24■■□□□ 1.43
SCUBE3Q8IX30 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
SCUBE3Q8IX30 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SCUBE3Q8IX30 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24■■□□□ 1.43
SCUBE3Q8IX30 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.99■■□□□ 1.43
SCUBE3Q8IX30 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.99■■□□□ 1.43
SCUBE3Q8IX30 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SCUBE3Q8IX30 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.99■■□□□ 1.43
SCUBE3Q8IX30 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.99■■□□□ 1.43
SCUBE3Q8IX30 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.99■■□□□ 1.43
SCUBE3Q8IX30 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
SCUBE3Q8IX30 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
SCUBE3Q8IX30 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SCUBE3Q8IX30 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SCUBE3Q8IX30 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SCUBE3Q8IX30 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCUBE3Q8IX30 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.98■■□□□ 1.43
SCUBE3Q8IX30 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCUBE3Q8IX30 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCUBE3Q8IX30 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCUBE3Q8IX30 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.98■■□□□ 1.43
SCUBE3Q8IX30 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCUBE3Q8IX30 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SCUBE3Q8IX30 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SCUBE3Q8IX30 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SCUBE3Q8IX30 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
SCUBE3Q8IX30 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.97■■□□□ 1.43
SCUBE3Q8IX30 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SCUBE3Q8IX30 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.97■■□□□ 1.43
SCUBE3Q8IX30 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.97■■□□□ 1.43
SCUBE3Q8IX30 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.97■■□□□ 1.43
SCUBE3Q8IX30 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
SCUBE3Q8IX30 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SCUBE3Q8IX30 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.96■■□□□ 1.43
SCUBE3Q8IX30 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCUBE3Q8IX30 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.96■■□□□ 1.43
SCUBE3Q8IX30 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCUBE3Q8IX30 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SCUBE3Q8IX30 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
SCUBE3Q8IX30 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCUBE3Q8IX30 AL356441.2-201ENST00000443009 864 ntBASIC23.96■■□□□ 1.43
SCUBE3Q8IX30 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCUBE3Q8IX30 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCUBE3Q8IX30 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SCUBE3Q8IX30 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.95■■□□□ 1.42
SCUBE3Q8IX30 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.95■■□□□ 1.42
SCUBE3Q8IX30 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SCUBE3Q8IX30 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.95■■□□□ 1.42
SCUBE3Q8IX30 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
SCUBE3Q8IX30 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCUBE3Q8IX30 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCUBE3Q8IX30 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.94■■□□□ 1.42
SCUBE3Q8IX30 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCUBE3Q8IX30 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.93■■□□□ 1.42
SCUBE3Q8IX30 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.93■■□□□ 1.42
SCUBE3Q8IX30 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.93■■□□□ 1.42
SCUBE3Q8IX30 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SCUBE3Q8IX30 AC005703.6-201ENST00000623265 1329 ntBASIC23.93■■□□□ 1.42
SCUBE3Q8IX30 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.93■■□□□ 1.42
SCUBE3Q8IX30 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.93■■□□□ 1.42
SCUBE3Q8IX30 MIR6724-1-201ENST00000616420 92 ntBASIC23.93■■□□□ 1.42
SCUBE3Q8IX30 MIR6724-2-201ENST00000616483 92 ntBASIC23.93■■□□□ 1.42
SCUBE3Q8IX30 MIR6724-4-201ENST00000617390 92 ntBASIC23.93■■□□□ 1.42
SCUBE3Q8IX30 MIR6724-3-201ENST00000622482 92 ntBASIC23.93■■□□□ 1.42
SCUBE3Q8IX30 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.93■■□□□ 1.42
SCUBE3Q8IX30 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SCUBE3Q8IX30 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCUBE3Q8IX30 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCUBE3Q8IX30 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCUBE3Q8IX30 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.92■■□□□ 1.42
SCUBE3Q8IX30 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCUBE3Q8IX30 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.92■■□□□ 1.42
SCUBE3Q8IX30 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SCUBE3Q8IX30 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCUBE3Q8IX30 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
SCUBE3Q8IX30 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SCUBE3Q8IX30 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
SCUBE3Q8IX30 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCUBE3Q8IX30 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SCUBE3Q8IX30 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.92■■□□□ 1.42
SCUBE3Q8IX30 MIR935-201ENST00000401179 91 ntBASIC23.91■■□□□ 1.42
SCUBE3Q8IX30 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SCUBE3Q8IX30 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCUBE3Q8IX30 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.91■■□□□ 1.42
SCUBE3Q8IX30 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
SCUBE3Q8IX30 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCUBE3Q8IX30 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SCUBE3Q8IX30 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
SCUBE3Q8IX30 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.9■■□□□ 1.42
SCUBE3Q8IX30 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCUBE3Q8IX30 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCUBE3Q8IX30 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms