Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.33■■□□□ 1.81
SCG2P13521 KRT16P3-201ENST00000439127 1283 ntBASIC26.33■■□□□ 1.81
SCG2P13521 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.33■■□□□ 1.81
SCG2P13521 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.33■■□□□ 1.81
SCG2P13521 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCG2P13521 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCG2P13521 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC26.32■■□□□ 1.8
SCG2P13521 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCG2P13521 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.32■■□□□ 1.8
SCG2P13521 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
SCG2P13521 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.32■■□□□ 1.8
SCG2P13521 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCG2P13521 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCG2P13521 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.31■■□□□ 1.8
SCG2P13521 AL356441.2-201ENST00000443009 864 ntBASIC26.31■■□□□ 1.8
SCG2P13521 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC26.31■■□□□ 1.8
SCG2P13521 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SCG2P13521 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
SCG2P13521 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.31■■□□□ 1.8
SCG2P13521 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SCG2P13521 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SCG2P13521 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SCG2P13521 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCG2P13521 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.3■■□□□ 1.8
SCG2P13521 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SCG2P13521 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.3■■□□□ 1.8
SCG2P13521 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCG2P13521 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.3■■□□□ 1.8
SCG2P13521 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCG2P13521 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SCG2P13521 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SCG2P13521 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SCG2P13521 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SCG2P13521 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SCG2P13521 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
SCG2P13521 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCG2P13521 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCG2P13521 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCG2P13521 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.28■■□□□ 1.8
SCG2P13521 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.28■■□□□ 1.8
SCG2P13521 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.28■■□□□ 1.8
SCG2P13521 AC005703.6-201ENST00000623265 1329 ntBASIC26.28■■□□□ 1.8
SCG2P13521 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SCG2P13521 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SCG2P13521 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCG2P13521 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.27■■□□□ 1.8
SCG2P13521 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.27■■□□□ 1.8
SCG2P13521 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.27■■□□□ 1.8
SCG2P13521 MIR6724-1-201ENST00000616420 92 ntBASIC26.27■■□□□ 1.8
SCG2P13521 MIR6724-2-201ENST00000616483 92 ntBASIC26.27■■□□□ 1.8
SCG2P13521 MIR6724-4-201ENST00000617390 92 ntBASIC26.27■■□□□ 1.8
SCG2P13521 MIR6724-3-201ENST00000622482 92 ntBASIC26.27■■□□□ 1.8
SCG2P13521 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
SCG2P13521 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCG2P13521 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCG2P13521 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCG2P13521 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
SCG2P13521 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.26■■□□□ 1.79
SCG2P13521 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCG2P13521 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SCG2P13521 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.26■■□□□ 1.79
SCG2P13521 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCG2P13521 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCG2P13521 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCG2P13521 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.25■■□□□ 1.79
SCG2P13521 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.25■■□□□ 1.79
SCG2P13521 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCG2P13521 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.24■■□□□ 1.79
SCG2P13521 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCG2P13521 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.24■■□□□ 1.79
SCG2P13521 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.24■■□□□ 1.79
SCG2P13521 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.24■■□□□ 1.79
SCG2P13521 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.24■■□□□ 1.79
SCG2P13521 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCG2P13521 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCG2P13521 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SCG2P13521 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.24■■□□□ 1.79
SCG2P13521 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCG2P13521 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCG2P13521 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.23■■□□□ 1.79
SCG2P13521 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.23■■□□□ 1.79
SCG2P13521 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
SCG2P13521 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCG2P13521 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.23■■□□□ 1.79
SCG2P13521 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.23■■□□□ 1.79
SCG2P13521 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SCG2P13521 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCG2P13521 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
SCG2P13521 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.22■■□□□ 1.79
SCG2P13521 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SCG2P13521 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCG2P13521 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
SCG2P13521 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCG2P13521 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
SCG2P13521 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCG2P13521 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SCG2P13521 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.21■■□□□ 1.79
SCG2P13521 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCG2P13521 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
SCG2P13521 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms