Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCL2P13500 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.83■□□□□ 0.77
CCL2P13500 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.83■□□□□ 0.77
CCL2P13500 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.83■□□□□ 0.77
CCL2P13500 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCL2P13500 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCL2P13500 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCL2P13500 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.83■□□□□ 0.76
CCL2P13500 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCL2P13500 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCL2P13500 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCL2P13500 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCL2P13500 ALDH1A3-203ENST00000557963 1670 ntBASIC19.82■□□□□ 0.76
CCL2P13500 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCL2P13500 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCL2P13500 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CCL2P13500 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.82■□□□□ 0.76
CCL2P13500 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.82■□□□□ 0.76
CCL2P13500 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.82■□□□□ 0.76
CCL2P13500 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCL2P13500 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.82■□□□□ 0.76
CCL2P13500 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.82■□□□□ 0.76
CCL2P13500 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
CCL2P13500 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCL2P13500 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCL2P13500 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.82■□□□□ 0.76
CCL2P13500 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCL2P13500 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCL2P13500 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCL2P13500 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCL2P13500 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCL2P13500 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCL2P13500 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCL2P13500 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.81■□□□□ 0.76
CCL2P13500 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCL2P13500 KRT16P3-201ENST00000439127 1283 ntBASIC19.81■□□□□ 0.76
CCL2P13500 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.81■□□□□ 0.76
CCL2P13500 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.81■□□□□ 0.76
CCL2P13500 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.81■□□□□ 0.76
CCL2P13500 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.81■□□□□ 0.76
CCL2P13500 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCL2P13500 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCL2P13500 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCL2P13500 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.81■□□□□ 0.76
CCL2P13500 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCL2P13500 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCL2P13500 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCL2P13500 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCL2P13500 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.8■□□□□ 0.76
CCL2P13500 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.8■□□□□ 0.76
CCL2P13500 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.8■□□□□ 0.76
CCL2P13500 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCL2P13500 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.8■□□□□ 0.76
CCL2P13500 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.8■□□□□ 0.76
CCL2P13500 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCL2P13500 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCL2P13500 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCL2P13500 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.79■□□□□ 0.76
CCL2P13500 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCL2P13500 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCL2P13500 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.79■□□□□ 0.76
CCL2P13500 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCL2P13500 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
CCL2P13500 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.79■□□□□ 0.76
CCL2P13500 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.79■□□□□ 0.76
CCL2P13500 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCL2P13500 MIR6722-201ENST00000617286 78 ntBASIC19.79■□□□□ 0.76
CCL2P13500 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCL2P13500 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCL2P13500 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCL2P13500 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCL2P13500 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
CCL2P13500 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCL2P13500 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.78■□□□□ 0.76
CCL2P13500 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CCL2P13500 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCL2P13500 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CCL2P13500 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.78■□□□□ 0.76
CCL2P13500 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.78■□□□□ 0.76
CCL2P13500 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCL2P13500 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.78■□□□□ 0.76
CCL2P13500 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCL2P13500 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCL2P13500 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCL2P13500 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCL2P13500 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCL2P13500 AL356441.2-201ENST00000443009 864 ntBASIC19.77■□□□□ 0.76
CCL2P13500 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.77■□□□□ 0.76
CCL2P13500 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCL2P13500 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCL2P13500 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CCL2P13500 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCL2P13500 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.76■□□□□ 0.75
CCL2P13500 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCL2P13500 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCL2P13500 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCL2P13500 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCL2P13500 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CCL2P13500 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCL2P13500 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms