Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC30.69■■■□□ 2.5
LTN1O94822 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
LTN1O94822 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC30.69■■■□□ 2.5
LTN1O94822 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC30.69■■■□□ 2.5
LTN1O94822 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
LTN1O94822 HES6-206ENST00000409574 738 ntTSL 2 BASIC30.69■■■□□ 2.5
LTN1O94822 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC30.69■■■□□ 2.5
LTN1O94822 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
LTN1O94822 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
LTN1O94822 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC30.68■■■□□ 2.5
LTN1O94822 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC30.68■■■□□ 2.5
LTN1O94822 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
LTN1O94822 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC30.68■■■□□ 2.5
LTN1O94822 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
LTN1O94822 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC30.67■■■□□ 2.5
LTN1O94822 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC30.67■■■□□ 2.5
LTN1O94822 SLC47A1P1-202ENST00000449666 945 ntBASIC30.67■■■□□ 2.5
LTN1O94822 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC30.67■■■□□ 2.5
LTN1O94822 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
LTN1O94822 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
LTN1O94822 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
LTN1O94822 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
LTN1O94822 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
LTN1O94822 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC30.66■■■□□ 2.5
LTN1O94822 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
LTN1O94822 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
LTN1O94822 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
LTN1O94822 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
LTN1O94822 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC30.66■■■□□ 2.5
LTN1O94822 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
LTN1O94822 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC30.66■■■□□ 2.5
LTN1O94822 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC30.66■■■□□ 2.5
LTN1O94822 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC30.66■■■□□ 2.5
LTN1O94822 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
LTN1O94822 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC30.65■■■□□ 2.5
LTN1O94822 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
LTN1O94822 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
LTN1O94822 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
LTN1O94822 AC009086.3-201ENST00000623486 1008 ntBASIC30.64■■■□□ 2.5
LTN1O94822 AC145676.1-201ENST00000514988 2004 ntBASIC30.64■■■□□ 2.5
LTN1O94822 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
LTN1O94822 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
LTN1O94822 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC30.64■■■□□ 2.5
LTN1O94822 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC30.64■■■□□ 2.5
LTN1O94822 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC30.64■■■□□ 2.49
LTN1O94822 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
LTN1O94822 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
LTN1O94822 AL162430.1-201ENST00000480705 870 ntBASIC30.63■■■□□ 2.49
LTN1O94822 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC30.63■■■□□ 2.49
LTN1O94822 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
LTN1O94822 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
LTN1O94822 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
LTN1O94822 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC30.62■■■□□ 2.49
LTN1O94822 HACD1-201ENST00000326961 773 ntTSL 2 BASIC30.62■■■□□ 2.49
LTN1O94822 JTB-203ENST00000368589 1216 ntTSL 2 BASIC30.62■■■□□ 2.49
LTN1O94822 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
LTN1O94822 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
LTN1O94822 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
LTN1O94822 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
LTN1O94822 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
LTN1O94822 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
LTN1O94822 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
LTN1O94822 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
LTN1O94822 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC30.61■■■□□ 2.49
LTN1O94822 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
LTN1O94822 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
LTN1O94822 IRS3P-201ENST00000223076 1006 ntBASIC30.61■■■□□ 2.49
LTN1O94822 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
LTN1O94822 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
LTN1O94822 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
LTN1O94822 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
LTN1O94822 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
LTN1O94822 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC30.6■■■□□ 2.49
LTN1O94822 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC30.6■■■□□ 2.49
LTN1O94822 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC30.6■■■□□ 2.49
LTN1O94822 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
LTN1O94822 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC30.6■■■□□ 2.49
LTN1O94822 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
LTN1O94822 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
LTN1O94822 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
LTN1O94822 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
LTN1O94822 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
LTN1O94822 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
LTN1O94822 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
LTN1O94822 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
LTN1O94822 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC30.59■■■□□ 2.49
LTN1O94822 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
LTN1O94822 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
LTN1O94822 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
LTN1O94822 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
LTN1O94822 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
LTN1O94822 VGF-203ENST00000611537 1622 ntTSL 5 BASIC30.58■■■□□ 2.49
LTN1O94822 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
LTN1O94822 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
LTN1O94822 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC30.58■■■□□ 2.49
LTN1O94822 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC30.57■■■□□ 2.48
LTN1O94822 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC30.57■■■□□ 2.48
LTN1O94822 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
LTN1O94822 BX842568.3-201ENST00000418104 571 ntBASIC30.57■■■□□ 2.48
LTN1O94822 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC30.57■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms