Protein–RNA interactions for Protein: O14994

SYN3, Synapsin-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3O14994 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SYN3O14994 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SYN3O14994 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SYN3O14994 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.26■■□□□ 1.47
SYN3O14994 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SYN3O14994 MIR935-201ENST00000401179 91 ntBASIC24.26■■□□□ 1.47
SYN3O14994 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
SYN3O14994 AC099791.2-201ENST00000605725 427 ntBASIC24.26■■□□□ 1.47
SYN3O14994 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
SYN3O14994 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SYN3O14994 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
SYN3O14994 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SYN3O14994 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.25■■□□□ 1.47
SYN3O14994 SUDS3P1-201ENST00000505831 966 ntBASIC24.25■■□□□ 1.47
SYN3O14994 AC142381.2-201ENST00000566120 298 ntBASIC24.25■■□□□ 1.47
SYN3O14994 AL355001.2-201ENST00000620617 1191 ntBASIC24.25■■□□□ 1.47
SYN3O14994 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SYN3O14994 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SYN3O14994 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SYN3O14994 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.24■■□□□ 1.47
SYN3O14994 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
SYN3O14994 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC24.24■■□□□ 1.47
SYN3O14994 AC241377.3-202ENST00000626088 1088 ntBASIC24.24■■□□□ 1.47
SYN3O14994 AC241585.3-202ENST00000628937 1088 ntBASIC24.24■■□□□ 1.47
SYN3O14994 AC245100.8-202ENST00000629247 1058 ntBASIC24.24■■□□□ 1.47
SYN3O14994 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
SYN3O14994 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SYN3O14994 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.23■■□□□ 1.47
SYN3O14994 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SYN3O14994 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SYN3O14994 AL138724.1-201ENST00000606771 1088 ntBASIC24.23■■□□□ 1.47
SYN3O14994 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.23■■□□□ 1.47
SYN3O14994 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SYN3O14994 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
SYN3O14994 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.23■■□□□ 1.47
SYN3O14994 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SYN3O14994 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SYN3O14994 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SYN3O14994 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
SYN3O14994 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
SYN3O14994 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SYN3O14994 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
SYN3O14994 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.22■■□□□ 1.47
SYN3O14994 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SYN3O14994 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SYN3O14994 SERBP1P1-201ENST00000396021 1160 ntBASIC24.22■■□□□ 1.47
SYN3O14994 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.21■■□□□ 1.47
SYN3O14994 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SYN3O14994 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.21■■□□□ 1.47
SYN3O14994 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.21■■□□□ 1.47
SYN3O14994 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SYN3O14994 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.21■■□□□ 1.47
SYN3O14994 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.21■■□□□ 1.47
SYN3O14994 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SYN3O14994 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
SYN3O14994 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SYN3O14994 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SYN3O14994 AC138932.3-201ENST00000567634 1902 ntBASIC24.2■■□□□ 1.46
SYN3O14994 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.2■■□□□ 1.46
SYN3O14994 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SYN3O14994 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SYN3O14994 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SYN3O14994 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
SYN3O14994 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SYN3O14994 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SYN3O14994 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.2■■□□□ 1.46
SYN3O14994 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SYN3O14994 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SYN3O14994 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.19■■□□□ 1.46
SYN3O14994 AC011298.3-201ENST00000615796 283 ntBASIC24.19■■□□□ 1.46
SYN3O14994 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
SYN3O14994 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.19■■□□□ 1.46
SYN3O14994 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
SYN3O14994 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SYN3O14994 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SYN3O14994 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SYN3O14994 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.18■■□□□ 1.46
SYN3O14994 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SYN3O14994 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SYN3O14994 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SYN3O14994 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SYN3O14994 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
SYN3O14994 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
SYN3O14994 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SYN3O14994 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SYN3O14994 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.17■■□□□ 1.46
SYN3O14994 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.17■■□□□ 1.46
SYN3O14994 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.17■■□□□ 1.46
SYN3O14994 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.17■■□□□ 1.46
SYN3O14994 MIR4767-201ENST00000582827 78 ntBASIC24.17■■□□□ 1.46
SYN3O14994 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.17■■□□□ 1.46
SYN3O14994 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.17■■□□□ 1.46
SYN3O14994 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SYN3O14994 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SYN3O14994 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SYN3O14994 AC135731.1-201ENST00000569415 2548 ntBASIC24.17■■□□□ 1.46
SYN3O14994 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SYN3O14994 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.16■■□□□ 1.46
SYN3O14994 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
SYN3O14994 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms