Protein–RNA interactions for Protein: A0A1B0GVG4

CCDC194, Coiled-coil domain-containing protein 194, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC194A0A1B0GVG4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.08■■□□□ 1.77
CCDC194A0A1B0GVG4 UNC93B8-201ENST00000511903 705 ntBASIC26.08■■□□□ 1.77
CCDC194A0A1B0GVG4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
CCDC194A0A1B0GVG4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CCDC194A0A1B0GVG4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CCDC194A0A1B0GVG4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
CCDC194A0A1B0GVG4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.76
CCDC194A0A1B0GVG4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
CCDC194A0A1B0GVG4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
CCDC194A0A1B0GVG4 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.07■■□□□ 1.76
CCDC194A0A1B0GVG4 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.07■■□□□ 1.76
CCDC194A0A1B0GVG4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC194A0A1B0GVG4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.07■■□□□ 1.76
CCDC194A0A1B0GVG4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.07■■□□□ 1.76
CCDC194A0A1B0GVG4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC194A0A1B0GVG4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC194A0A1B0GVG4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC194A0A1B0GVG4 AC010997.5-201ENST00000609182 354 ntBASIC26.07■■□□□ 1.76
CCDC194A0A1B0GVG4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC194A0A1B0GVG4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC194A0A1B0GVG4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.07■■□□□ 1.76
CCDC194A0A1B0GVG4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC194A0A1B0GVG4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC194A0A1B0GVG4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC194A0A1B0GVG4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC194A0A1B0GVG4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC194A0A1B0GVG4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC194A0A1B0GVG4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.05■■□□□ 1.76
CCDC194A0A1B0GVG4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.05■■□□□ 1.76
CCDC194A0A1B0GVG4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.05■■□□□ 1.76
CCDC194A0A1B0GVG4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCDC194A0A1B0GVG4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCDC194A0A1B0GVG4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCDC194A0A1B0GVG4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCDC194A0A1B0GVG4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCDC194A0A1B0GVG4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
CCDC194A0A1B0GVG4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.04■■□□□ 1.76
CCDC194A0A1B0GVG4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCDC194A0A1B0GVG4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.04■■□□□ 1.76
CCDC194A0A1B0GVG4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.04■■□□□ 1.76
CCDC194A0A1B0GVG4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.04■■□□□ 1.76
CCDC194A0A1B0GVG4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC26.04■■□□□ 1.76
CCDC194A0A1B0GVG4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCDC194A0A1B0GVG4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC194A0A1B0GVG4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC194A0A1B0GVG4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC194A0A1B0GVG4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC194A0A1B0GVG4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.03■■□□□ 1.76
CCDC194A0A1B0GVG4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.03■■□□□ 1.76
CCDC194A0A1B0GVG4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.03■■□□□ 1.76
CCDC194A0A1B0GVG4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC194A0A1B0GVG4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
CCDC194A0A1B0GVG4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC194A0A1B0GVG4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC194A0A1B0GVG4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.02■■□□□ 1.76
CCDC194A0A1B0GVG4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.02■■□□□ 1.76
CCDC194A0A1B0GVG4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC194A0A1B0GVG4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.02■■□□□ 1.76
CCDC194A0A1B0GVG4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
CCDC194A0A1B0GVG4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CCDC194A0A1B0GVG4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CCDC194A0A1B0GVG4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CCDC194A0A1B0GVG4 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.01■■□□□ 1.75
CCDC194A0A1B0GVG4 KRT16P3-201ENST00000439127 1283 ntBASIC26.01■■□□□ 1.75
CCDC194A0A1B0GVG4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
CCDC194A0A1B0GVG4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CCDC194A0A1B0GVG4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC26.01■■□□□ 1.75
CCDC194A0A1B0GVG4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
CCDC194A0A1B0GVG4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26■■□□□ 1.75
CCDC194A0A1B0GVG4 AC005703.6-201ENST00000623265 1329 ntBASIC26■■□□□ 1.75
CCDC194A0A1B0GVG4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26■■□□□ 1.75
CCDC194A0A1B0GVG4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26■■□□□ 1.75
CCDC194A0A1B0GVG4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26■■□□□ 1.75
CCDC194A0A1B0GVG4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26■■□□□ 1.75
CCDC194A0A1B0GVG4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
CCDC194A0A1B0GVG4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26■■□□□ 1.75
CCDC194A0A1B0GVG4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
CCDC194A0A1B0GVG4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
CCDC194A0A1B0GVG4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26■■□□□ 1.75
CCDC194A0A1B0GVG4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
CCDC194A0A1B0GVG4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26■■□□□ 1.75
CCDC194A0A1B0GVG4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC194A0A1B0GVG4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC194A0A1B0GVG4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.99■■□□□ 1.75
CCDC194A0A1B0GVG4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.99■■□□□ 1.75
CCDC194A0A1B0GVG4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
CCDC194A0A1B0GVG4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC194A0A1B0GVG4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC194A0A1B0GVG4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC194A0A1B0GVG4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC194A0A1B0GVG4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.98■■□□□ 1.75
CCDC194A0A1B0GVG4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC194A0A1B0GVG4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.98■■□□□ 1.75
CCDC194A0A1B0GVG4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
CCDC194A0A1B0GVG4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
CCDC194A0A1B0GVG4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
CCDC194A0A1B0GVG4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC194A0A1B0GVG4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.97■■□□□ 1.75
CCDC194A0A1B0GVG4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC194A0A1B0GVG4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.97■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms