Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
SLC6A20Q9NP91 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.05■■□□□ 1.12
SLC6A20Q9NP91 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
SLC6A20Q9NP91 AC010997.5-201ENST00000609182 354 ntBASIC22.05■■□□□ 1.12
SLC6A20Q9NP91 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.05■■□□□ 1.12
SLC6A20Q9NP91 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC6A20Q9NP91 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC6A20Q9NP91 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
SLC6A20Q9NP91 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC6A20Q9NP91 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC6A20Q9NP91 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLC6A20Q9NP91 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC6A20Q9NP91 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLC6A20Q9NP91 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.04■■□□□ 1.12
SLC6A20Q9NP91 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLC6A20Q9NP91 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.04■■□□□ 1.12
SLC6A20Q9NP91 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.04■■□□□ 1.12
SLC6A20Q9NP91 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SLC6A20Q9NP91 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.03■■□□□ 1.12
SLC6A20Q9NP91 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.03■■□□□ 1.12
SLC6A20Q9NP91 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.03■■□□□ 1.12
SLC6A20Q9NP91 MIR6722-201ENST00000617286 78 ntBASIC22.03■■□□□ 1.12
SLC6A20Q9NP91 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.03■■□□□ 1.12
SLC6A20Q9NP91 AC004812.2-201ENST00000611079 2094 ntBASIC22.03■■□□□ 1.12
SLC6A20Q9NP91 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SLC6A20Q9NP91 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SLC6A20Q9NP91 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC6A20Q9NP91 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.02■■□□□ 1.12
SLC6A20Q9NP91 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
SLC6A20Q9NP91 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.01■■□□□ 1.11
SLC6A20Q9NP91 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.01■■□□□ 1.11
SLC6A20Q9NP91 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC6A20Q9NP91 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC6A20Q9NP91 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
SLC6A20Q9NP91 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
SLC6A20Q9NP91 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
SLC6A20Q9NP91 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC6A20Q9NP91 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22■■□□□ 1.11
SLC6A20Q9NP91 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22■■□□□ 1.11
SLC6A20Q9NP91 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
SLC6A20Q9NP91 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLC6A20Q9NP91 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
SLC6A20Q9NP91 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22■■□□□ 1.11
SLC6A20Q9NP91 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22■■□□□ 1.11
SLC6A20Q9NP91 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SLC6A20Q9NP91 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
SLC6A20Q9NP91 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC6A20Q9NP91 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SLC6A20Q9NP91 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC6A20Q9NP91 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC6A20Q9NP91 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.99■■□□□ 1.11
SLC6A20Q9NP91 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC6A20Q9NP91 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SLC6A20Q9NP91 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC6A20Q9NP91 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC6A20Q9NP91 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.98■■□□□ 1.11
SLC6A20Q9NP91 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLC6A20Q9NP91 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.98■■□□□ 1.11
SLC6A20Q9NP91 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.98■■□□□ 1.11
SLC6A20Q9NP91 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.98■■□□□ 1.11
SLC6A20Q9NP91 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.98■■□□□ 1.11
SLC6A20Q9NP91 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.98■■□□□ 1.11
SLC6A20Q9NP91 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLC6A20Q9NP91 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
SLC6A20Q9NP91 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC6A20Q9NP91 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
SLC6A20Q9NP91 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.97■■□□□ 1.11
SLC6A20Q9NP91 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.97■■□□□ 1.11
SLC6A20Q9NP91 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.97■■□□□ 1.11
SLC6A20Q9NP91 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SLC6A20Q9NP91 ALDH1A3-203ENST00000557963 1670 ntBASIC21.97■■□□□ 1.11
SLC6A20Q9NP91 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A20Q9NP91 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A20Q9NP91 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A20Q9NP91 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A20Q9NP91 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A20Q9NP91 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A20Q9NP91 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A20Q9NP91 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.96■■□□□ 1.11
SLC6A20Q9NP91 MIR6724-1-201ENST00000616420 92 ntBASIC21.96■■□□□ 1.11
SLC6A20Q9NP91 MIR6724-2-201ENST00000616483 92 ntBASIC21.96■■□□□ 1.11
SLC6A20Q9NP91 MIR6724-4-201ENST00000617390 92 ntBASIC21.96■■□□□ 1.11
SLC6A20Q9NP91 MIR6724-3-201ENST00000622482 92 ntBASIC21.96■■□□□ 1.11
SLC6A20Q9NP91 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A20Q9NP91 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.96■■□□□ 1.11
SLC6A20Q9NP91 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.96■■□□□ 1.11
SLC6A20Q9NP91 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A20Q9NP91 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A20Q9NP91 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.96■■□□□ 1.11
SLC6A20Q9NP91 AC093323.1-202ENST00000635031 2045 ntBASIC21.96■■□□□ 1.11
SLC6A20Q9NP91 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.95■■□□□ 1.1
SLC6A20Q9NP91 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC6A20Q9NP91 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SLC6A20Q9NP91 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC6A20Q9NP91 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.95■■□□□ 1.1
SLC6A20Q9NP91 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.95■■□□□ 1.1
SLC6A20Q9NP91 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC6A20Q9NP91 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.95■■□□□ 1.1
SLC6A20Q9NP91 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC6A20Q9NP91 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms