Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
XRN1Q8IZH2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC32.39■■■□□ 2.78
XRN1Q8IZH2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC32.39■■■□□ 2.78
XRN1Q8IZH2 YBX1P1-201ENST00000445822 960 ntBASIC32.39■■■□□ 2.78
XRN1Q8IZH2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC32.39■■■□□ 2.77
XRN1Q8IZH2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
XRN1Q8IZH2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC32.38■■■□□ 2.77
XRN1Q8IZH2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC32.38■■■□□ 2.77
XRN1Q8IZH2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
XRN1Q8IZH2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC32.38■■■□□ 2.77
XRN1Q8IZH2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC32.37■■■□□ 2.77
XRN1Q8IZH2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC32.37■■■□□ 2.77
XRN1Q8IZH2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
XRN1Q8IZH2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
XRN1Q8IZH2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
XRN1Q8IZH2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC32.37■■■□□ 2.77
XRN1Q8IZH2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC32.36■■■□□ 2.77
XRN1Q8IZH2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
XRN1Q8IZH2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC32.36■■■□□ 2.77
XRN1Q8IZH2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
XRN1Q8IZH2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC32.35■■■□□ 2.77
XRN1Q8IZH2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC32.35■■■□□ 2.77
XRN1Q8IZH2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
XRN1Q8IZH2 AC022517.1-201ENST00000592429 346 ntBASIC32.34■■■□□ 2.77
XRN1Q8IZH2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC32.34■■■□□ 2.77
XRN1Q8IZH2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC32.34■■■□□ 2.77
XRN1Q8IZH2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC32.34■■■□□ 2.77
XRN1Q8IZH2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
XRN1Q8IZH2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
XRN1Q8IZH2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC32.33■■■□□ 2.77
XRN1Q8IZH2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC32.32■■■□□ 2.76
XRN1Q8IZH2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC32.32■■■□□ 2.76
XRN1Q8IZH2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC32.32■■■□□ 2.76
XRN1Q8IZH2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
XRN1Q8IZH2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC32.32■■■□□ 2.76
XRN1Q8IZH2 AC009086.3-201ENST00000623486 1008 ntBASIC32.32■■■□□ 2.76
XRN1Q8IZH2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC32.32■■■□□ 2.76
XRN1Q8IZH2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
XRN1Q8IZH2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC32.31■■■□□ 2.76
XRN1Q8IZH2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
XRN1Q8IZH2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
XRN1Q8IZH2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
XRN1Q8IZH2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
XRN1Q8IZH2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC32.31■■■□□ 2.76
XRN1Q8IZH2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
XRN1Q8IZH2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC32.31■■■□□ 2.76
XRN1Q8IZH2 AL137784.2-201ENST00000607332 1000 ntBASIC32.31■■■□□ 2.76
XRN1Q8IZH2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC32.31■■■□□ 2.76
XRN1Q8IZH2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
XRN1Q8IZH2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC32.3■■■□□ 2.76
XRN1Q8IZH2 SLC47A1P1-202ENST00000449666 945 ntBASIC32.3■■■□□ 2.76
XRN1Q8IZH2 MIR3181-201ENST00000578512 73 ntBASIC32.3■■■□□ 2.76
XRN1Q8IZH2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC32.3■■■□□ 2.76
XRN1Q8IZH2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
XRN1Q8IZH2 GRAMD4P2-201ENST00000423297 1097 ntBASIC32.29■■■□□ 2.76
XRN1Q8IZH2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC32.29■■■□□ 2.76
XRN1Q8IZH2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC32.29■■■□□ 2.76
XRN1Q8IZH2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC32.29■■■□□ 2.76
XRN1Q8IZH2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC32.29■■■□□ 2.76
XRN1Q8IZH2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
XRN1Q8IZH2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC32.29■■■□□ 2.76
XRN1Q8IZH2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC32.29■■■□□ 2.76
XRN1Q8IZH2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
XRN1Q8IZH2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC32.29■■■□□ 2.76
XRN1Q8IZH2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC32.28■■■□□ 2.76
XRN1Q8IZH2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC32.28■■■□□ 2.76
XRN1Q8IZH2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
XRN1Q8IZH2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC32.28■■■□□ 2.76
XRN1Q8IZH2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC32.28■■■□□ 2.76
XRN1Q8IZH2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC32.28■■■□□ 2.76
XRN1Q8IZH2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC32.28■■■□□ 2.76
XRN1Q8IZH2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC32.27■■■□□ 2.76
XRN1Q8IZH2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.27■■■□□ 2.76
XRN1Q8IZH2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC32.27■■■□□ 2.76
XRN1Q8IZH2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC32.27■■■□□ 2.76
XRN1Q8IZH2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC32.27■■■□□ 2.76
XRN1Q8IZH2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC32.27■■■□□ 2.76
XRN1Q8IZH2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC32.27■■■□□ 2.76
XRN1Q8IZH2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
XRN1Q8IZH2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC32.27■■■□□ 2.76
XRN1Q8IZH2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
XRN1Q8IZH2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.76
XRN1Q8IZH2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
XRN1Q8IZH2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
XRN1Q8IZH2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
XRN1Q8IZH2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
XRN1Q8IZH2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC32.25■■■□□ 2.75
XRN1Q8IZH2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC32.25■■■□□ 2.75
XRN1Q8IZH2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
XRN1Q8IZH2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
XRN1Q8IZH2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
XRN1Q8IZH2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
XRN1Q8IZH2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
XRN1Q8IZH2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
XRN1Q8IZH2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
XRN1Q8IZH2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC32.24■■■□□ 2.75
XRN1Q8IZH2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
XRN1Q8IZH2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC32.24■■■□□ 2.75
XRN1Q8IZH2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
XRN1Q8IZH2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms