Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.6■■□□□ 1.53
PCDHA13Q9Y5I0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA13Q9Y5I0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA13Q9Y5I0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA13Q9Y5I0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA13Q9Y5I0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.59■■□□□ 1.53
PCDHA13Q9Y5I0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA13Q9Y5I0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.59■■□□□ 1.53
PCDHA13Q9Y5I0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.59■■□□□ 1.53
PCDHA13Q9Y5I0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA13Q9Y5I0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHA13Q9Y5I0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHA13Q9Y5I0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.58■■□□□ 1.53
PCDHA13Q9Y5I0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.58■■□□□ 1.53
PCDHA13Q9Y5I0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHA13Q9Y5I0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
PCDHA13Q9Y5I0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.58■■□□□ 1.53
PCDHA13Q9Y5I0 ANOS2P-203ENST00000472227 1816 ntBASIC24.58■■□□□ 1.53
PCDHA13Q9Y5I0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
PCDHA13Q9Y5I0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA13Q9Y5I0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.57■■□□□ 1.52
PCDHA13Q9Y5I0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.57■■□□□ 1.52
PCDHA13Q9Y5I0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.57■■□□□ 1.52
PCDHA13Q9Y5I0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA13Q9Y5I0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC24.56■■□□□ 1.52
PCDHA13Q9Y5I0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA13Q9Y5I0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA13Q9Y5I0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.56■■□□□ 1.52
PCDHA13Q9Y5I0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA13Q9Y5I0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.56■■□□□ 1.52
PCDHA13Q9Y5I0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
PCDHA13Q9Y5I0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA13Q9Y5I0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA13Q9Y5I0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA13Q9Y5I0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
PCDHA13Q9Y5I0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
PCDHA13Q9Y5I0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.55■■□□□ 1.52
PCDHA13Q9Y5I0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA13Q9Y5I0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.55■■□□□ 1.52
PCDHA13Q9Y5I0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
PCDHA13Q9Y5I0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA13Q9Y5I0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA13Q9Y5I0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
PCDHA13Q9Y5I0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA13Q9Y5I0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA13Q9Y5I0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA13Q9Y5I0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.54■■□□□ 1.52
PCDHA13Q9Y5I0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.54■■□□□ 1.52
PCDHA13Q9Y5I0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA13Q9Y5I0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
PCDHA13Q9Y5I0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHA13Q9Y5I0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHA13Q9Y5I0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
PCDHA13Q9Y5I0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHA13Q9Y5I0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHA13Q9Y5I0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHA13Q9Y5I0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHA13Q9Y5I0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.53■■□□□ 1.52
PCDHA13Q9Y5I0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.53■■□□□ 1.52
PCDHA13Q9Y5I0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.52■■□□□ 1.52
PCDHA13Q9Y5I0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHA13Q9Y5I0 SPCS2P3-201ENST00000500401 656 ntBASIC24.52■■□□□ 1.52
PCDHA13Q9Y5I0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHA13Q9Y5I0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.52■■□□□ 1.52
PCDHA13Q9Y5I0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHA13Q9Y5I0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.52■■□□□ 1.52
PCDHA13Q9Y5I0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHA13Q9Y5I0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
PCDHA13Q9Y5I0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHA13Q9Y5I0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHA13Q9Y5I0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
PCDHA13Q9Y5I0 AC018755.3-202ENST00000596210 929 ntBASIC24.51■■□□□ 1.51
PCDHA13Q9Y5I0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHA13Q9Y5I0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHA13Q9Y5I0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.51■■□□□ 1.51
PCDHA13Q9Y5I0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHA13Q9Y5I0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDHA13Q9Y5I0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHA13Q9Y5I0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHA13Q9Y5I0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHA13Q9Y5I0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
PCDHA13Q9Y5I0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHA13Q9Y5I0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
PCDHA13Q9Y5I0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
PCDHA13Q9Y5I0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHA13Q9Y5I0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDHA13Q9Y5I0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHA13Q9Y5I0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHA13Q9Y5I0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHA13Q9Y5I0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
PCDHA13Q9Y5I0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHA13Q9Y5I0 AL592295.1-201ENST00000400984 884 ntBASIC24.49■■□□□ 1.51
PCDHA13Q9Y5I0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
PCDHA13Q9Y5I0 AL592293.1-201ENST00000502889 1188 ntBASIC24.49■■□□□ 1.51
PCDHA13Q9Y5I0 AC087393.1-201ENST00000582896 145 ntBASIC24.49■■□□□ 1.51
PCDHA13Q9Y5I0 AL161729.1-201ENST00000604104 1402 ntBASIC24.49■■□□□ 1.51
PCDHA13Q9Y5I0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.49■■□□□ 1.51
PCDHA13Q9Y5I0 AC092068.2-201ENST00000590491 1708 ntBASIC24.49■■□□□ 1.51
PCDHA13Q9Y5I0 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHA13Q9Y5I0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms