Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXJ3Q9UPW0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXJ3Q9UPW0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXJ3Q9UPW0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
FOXJ3Q9UPW0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXJ3Q9UPW0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXJ3Q9UPW0 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXJ3Q9UPW0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.02■□□□□ 0.8
FOXJ3Q9UPW0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
FOXJ3Q9UPW0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
FOXJ3Q9UPW0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXJ3Q9UPW0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.02■□□□□ 0.8
FOXJ3Q9UPW0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.02■□□□□ 0.8
FOXJ3Q9UPW0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.02■□□□□ 0.8
FOXJ3Q9UPW0 AC026202.3-201ENST00000600805 1127 ntBASIC20.02■□□□□ 0.8
FOXJ3Q9UPW0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXJ3Q9UPW0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXJ3Q9UPW0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXJ3Q9UPW0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
FOXJ3Q9UPW0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
FOXJ3Q9UPW0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.02■□□□□ 0.79
FOXJ3Q9UPW0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
FOXJ3Q9UPW0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXJ3Q9UPW0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.01■□□□□ 0.79
FOXJ3Q9UPW0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.01■□□□□ 0.79
FOXJ3Q9UPW0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXJ3Q9UPW0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
FOXJ3Q9UPW0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXJ3Q9UPW0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXJ3Q9UPW0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXJ3Q9UPW0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
FOXJ3Q9UPW0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXJ3Q9UPW0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXJ3Q9UPW0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXJ3Q9UPW0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20■□□□□ 0.79
FOXJ3Q9UPW0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20■□□□□ 0.79
FOXJ3Q9UPW0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20■□□□□ 0.79
FOXJ3Q9UPW0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20■□□□□ 0.79
FOXJ3Q9UPW0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20■□□□□ 0.79
FOXJ3Q9UPW0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXJ3Q9UPW0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
FOXJ3Q9UPW0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20■□□□□ 0.79
FOXJ3Q9UPW0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
FOXJ3Q9UPW0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXJ3Q9UPW0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXJ3Q9UPW0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXJ3Q9UPW0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXJ3Q9UPW0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
FOXJ3Q9UPW0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FOXJ3Q9UPW0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXJ3Q9UPW0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
FOXJ3Q9UPW0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
FOXJ3Q9UPW0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.99■□□□□ 0.79
FOXJ3Q9UPW0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FOXJ3Q9UPW0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.98■□□□□ 0.79
FOXJ3Q9UPW0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.98■□□□□ 0.79
FOXJ3Q9UPW0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXJ3Q9UPW0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXJ3Q9UPW0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXJ3Q9UPW0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.98■□□□□ 0.79
FOXJ3Q9UPW0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXJ3Q9UPW0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXJ3Q9UPW0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
FOXJ3Q9UPW0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.97■□□□□ 0.79
FOXJ3Q9UPW0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
FOXJ3Q9UPW0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXJ3Q9UPW0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.97■□□□□ 0.79
FOXJ3Q9UPW0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.97■□□□□ 0.79
FOXJ3Q9UPW0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
FOXJ3Q9UPW0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FOXJ3Q9UPW0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
FOXJ3Q9UPW0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXJ3Q9UPW0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FOXJ3Q9UPW0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.96■□□□□ 0.79
FOXJ3Q9UPW0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FOXJ3Q9UPW0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXJ3Q9UPW0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
FOXJ3Q9UPW0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXJ3Q9UPW0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXJ3Q9UPW0 AC233723.2-201ENST00000623798 2106 ntBASIC19.96■□□□□ 0.79
FOXJ3Q9UPW0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FOXJ3Q9UPW0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.95■□□□□ 0.78
FOXJ3Q9UPW0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXJ3Q9UPW0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXJ3Q9UPW0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXJ3Q9UPW0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXJ3Q9UPW0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FOXJ3Q9UPW0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.95■□□□□ 0.78
FOXJ3Q9UPW0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXJ3Q9UPW0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXJ3Q9UPW0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXJ3Q9UPW0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.94■□□□□ 0.78
FOXJ3Q9UPW0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXJ3Q9UPW0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXJ3Q9UPW0 AL161729.1-201ENST00000604104 1402 ntBASIC19.94■□□□□ 0.78
FOXJ3Q9UPW0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
FOXJ3Q9UPW0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXJ3Q9UPW0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXJ3Q9UPW0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FOXJ3Q9UPW0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms