Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.36■■□□□ 1.49
PCDHGC3Q9UN70 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHGC3Q9UN70 ABCB10P4-201ENST00000566803 2184 ntBASIC24.36■■□□□ 1.49
PCDHGC3Q9UN70 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGC3Q9UN70 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.35■■□□□ 1.49
PCDHGC3Q9UN70 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGC3Q9UN70 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGC3Q9UN70 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
PCDHGC3Q9UN70 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.35■■□□□ 1.49
PCDHGC3Q9UN70 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGC3Q9UN70 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
PCDHGC3Q9UN70 AC004448.1-201ENST00000458332 883 ntBASIC24.34■■□□□ 1.49
PCDHGC3Q9UN70 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
PCDHGC3Q9UN70 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHGC3Q9UN70 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.34■■□□□ 1.49
PCDHGC3Q9UN70 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHGC3Q9UN70 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHGC3Q9UN70 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHGC3Q9UN70 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHGC3Q9UN70 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHGC3Q9UN70 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHGC3Q9UN70 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.33■■□□□ 1.49
PCDHGC3Q9UN70 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHGC3Q9UN70 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHGC3Q9UN70 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHGC3Q9UN70 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.32■■□□□ 1.48
PCDHGC3Q9UN70 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGC3Q9UN70 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGC3Q9UN70 AC021242.3-201ENST00000607598 1377 ntBASIC24.32■■□□□ 1.48
PCDHGC3Q9UN70 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGC3Q9UN70 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGC3Q9UN70 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGC3Q9UN70 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
PCDHGC3Q9UN70 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGC3Q9UN70 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.32■■□□□ 1.48
PCDHGC3Q9UN70 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGC3Q9UN70 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
PCDHGC3Q9UN70 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGC3Q9UN70 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.32■■□□□ 1.48
PCDHGC3Q9UN70 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.32■■□□□ 1.48
PCDHGC3Q9UN70 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDHGC3Q9UN70 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHGC3Q9UN70 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHGC3Q9UN70 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.31■■□□□ 1.48
PCDHGC3Q9UN70 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.31■■□□□ 1.48
PCDHGC3Q9UN70 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
PCDHGC3Q9UN70 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.31■■□□□ 1.48
PCDHGC3Q9UN70 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDHGC3Q9UN70 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
PCDHGC3Q9UN70 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHGC3Q9UN70 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.3■■□□□ 1.48
PCDHGC3Q9UN70 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHGC3Q9UN70 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHGC3Q9UN70 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.3■■□□□ 1.48
PCDHGC3Q9UN70 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.3■■□□□ 1.48
PCDHGC3Q9UN70 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
PCDHGC3Q9UN70 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
PCDHGC3Q9UN70 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHGC3Q9UN70 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHGC3Q9UN70 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHGC3Q9UN70 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHGC3Q9UN70 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHGC3Q9UN70 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHGC3Q9UN70 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHGC3Q9UN70 BX664725.1-201ENST00000438252 379 ntBASIC24.29■■□□□ 1.48
PCDHGC3Q9UN70 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.29■■□□□ 1.48
PCDHGC3Q9UN70 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.29■■□□□ 1.48
PCDHGC3Q9UN70 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.29■■□□□ 1.48
PCDHGC3Q9UN70 AL451085.2-201ENST00000605085 799 ntBASIC24.29■■□□□ 1.48
PCDHGC3Q9UN70 SNX5-217ENST00000606557 1087 ntBASIC24.29■■□□□ 1.48
PCDHGC3Q9UN70 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
PCDHGC3Q9UN70 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
PCDHGC3Q9UN70 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
PCDHGC3Q9UN70 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHGC3Q9UN70 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHGC3Q9UN70 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHGC3Q9UN70 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHGC3Q9UN70 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHGC3Q9UN70 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.28■■□□□ 1.48
PCDHGC3Q9UN70 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHGC3Q9UN70 Z92544.1-202ENST00000571933 1220 ntBASIC24.28■■□□□ 1.48
PCDHGC3Q9UN70 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHGC3Q9UN70 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHGC3Q9UN70 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHGC3Q9UN70 ALDH1A3-203ENST00000557963 1670 ntBASIC24.27■■□□□ 1.48
PCDHGC3Q9UN70 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
PCDHGC3Q9UN70 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
PCDHGC3Q9UN70 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGC3Q9UN70 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGC3Q9UN70 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
PCDHGC3Q9UN70 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.27■■□□□ 1.48
PCDHGC3Q9UN70 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGC3Q9UN70 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGC3Q9UN70 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGC3Q9UN70 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.27■■□□□ 1.48
PCDHGC3Q9UN70 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.27■■□□□ 1.48
PCDHGC3Q9UN70 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGC3Q9UN70 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGC3Q9UN70 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.26■■□□□ 1.47
PCDHGC3Q9UN70 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms