Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM56Q96MV1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM56Q96MV1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM56Q96MV1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
TMEM56Q96MV1 AC233723.2-201ENST00000623798 2106 ntBASIC18.88■□□□□ 0.61
TMEM56Q96MV1 KRT18P10-201ENST00000388836 1287 ntBASIC18.88■□□□□ 0.61
TMEM56Q96MV1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.88■□□□□ 0.61
TMEM56Q96MV1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM56Q96MV1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM56Q96MV1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.88■□□□□ 0.61
TMEM56Q96MV1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM56Q96MV1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM56Q96MV1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TMEM56Q96MV1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM56Q96MV1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM56Q96MV1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM56Q96MV1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
TMEM56Q96MV1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.87■□□□□ 0.61
TMEM56Q96MV1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TMEM56Q96MV1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM56Q96MV1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM56Q96MV1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.87■□□□□ 0.61
TMEM56Q96MV1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM56Q96MV1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.87■□□□□ 0.61
TMEM56Q96MV1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.87■□□□□ 0.61
TMEM56Q96MV1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM56Q96MV1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM56Q96MV1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM56Q96MV1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM56Q96MV1 ANOS2P-203ENST00000472227 1816 ntBASIC18.86■□□□□ 0.61
TMEM56Q96MV1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.86■□□□□ 0.61
TMEM56Q96MV1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.86■□□□□ 0.61
TMEM56Q96MV1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.86■□□□□ 0.61
TMEM56Q96MV1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TMEM56Q96MV1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.86■□□□□ 0.61
TMEM56Q96MV1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.86■□□□□ 0.61
TMEM56Q96MV1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.86■□□□□ 0.61
TMEM56Q96MV1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM56Q96MV1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM56Q96MV1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.86■□□□□ 0.61
TMEM56Q96MV1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TMEM56Q96MV1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM56Q96MV1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TMEM56Q96MV1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM56Q96MV1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.85■□□□□ 0.61
TMEM56Q96MV1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.85■□□□□ 0.61
TMEM56Q96MV1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM56Q96MV1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM56Q96MV1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM56Q96MV1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM56Q96MV1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM56Q96MV1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM56Q96MV1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM56Q96MV1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM56Q96MV1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM56Q96MV1 AC092068.2-201ENST00000590491 1708 ntBASIC18.84■□□□□ 0.61
TMEM56Q96MV1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.84■□□□□ 0.61
TMEM56Q96MV1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM56Q96MV1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM56Q96MV1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM56Q96MV1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM56Q96MV1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM56Q96MV1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM56Q96MV1 DUSP8P3-201ENST00000399571 1760 ntBASIC18.83■□□□□ 0.61
TMEM56Q96MV1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM56Q96MV1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM56Q96MV1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TMEM56Q96MV1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM56Q96MV1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.83■□□□□ 0.6
TMEM56Q96MV1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.83■□□□□ 0.6
TMEM56Q96MV1 AC093536.1-201ENST00000569153 554 ntBASIC18.83■□□□□ 0.6
TMEM56Q96MV1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM56Q96MV1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM56Q96MV1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM56Q96MV1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM56Q96MV1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM56Q96MV1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.82■□□□□ 0.6
TMEM56Q96MV1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM56Q96MV1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM56Q96MV1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM56Q96MV1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM56Q96MV1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM56Q96MV1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM56Q96MV1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TMEM56Q96MV1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM56Q96MV1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM56Q96MV1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM56Q96MV1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM56Q96MV1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM56Q96MV1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM56Q96MV1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.81■□□□□ 0.6
TMEM56Q96MV1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM56Q96MV1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM56Q96MV1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM56Q96MV1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM56Q96MV1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
TMEM56Q96MV1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM56Q96MV1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM56Q96MV1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM56Q96MV1 AC007029.1-201ENST00000604183 313 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms