Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SLC44A1Q8WWI5 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.09■■□□□ 1.29
SLC44A1Q8WWI5 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
SLC44A1Q8WWI5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
SLC44A1Q8WWI5 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SLC44A1Q8WWI5 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.09■■□□□ 1.29
SLC44A1Q8WWI5 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.08■■□□□ 1.29
SLC44A1Q8WWI5 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
SLC44A1Q8WWI5 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
SLC44A1Q8WWI5 RPS2P7-201ENST00000447334 885 ntBASIC23.08■■□□□ 1.29
SLC44A1Q8WWI5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC44A1Q8WWI5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.08■■□□□ 1.29
SLC44A1Q8WWI5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SLC44A1Q8WWI5 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC44A1Q8WWI5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.07■■□□□ 1.28
SLC44A1Q8WWI5 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.07■■□□□ 1.28
SLC44A1Q8WWI5 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.07■■□□□ 1.28
SLC44A1Q8WWI5 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC44A1Q8WWI5 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
SLC44A1Q8WWI5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.07■■□□□ 1.28
SLC44A1Q8WWI5 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.07■■□□□ 1.28
SLC44A1Q8WWI5 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.06■■□□□ 1.28
SLC44A1Q8WWI5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLC44A1Q8WWI5 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.06■■□□□ 1.28
SLC44A1Q8WWI5 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
SLC44A1Q8WWI5 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLC44A1Q8WWI5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLC44A1Q8WWI5 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SLC44A1Q8WWI5 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLC44A1Q8WWI5 AL161729.1-201ENST00000604104 1402 ntBASIC23.06■■□□□ 1.28
SLC44A1Q8WWI5 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
SLC44A1Q8WWI5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SLC44A1Q8WWI5 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC44A1Q8WWI5 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.05■■□□□ 1.28
SLC44A1Q8WWI5 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC44A1Q8WWI5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC44A1Q8WWI5 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC44A1Q8WWI5 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC44A1Q8WWI5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC44A1Q8WWI5 AC092068.2-201ENST00000590491 1708 ntBASIC23.05■■□□□ 1.28
SLC44A1Q8WWI5 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC44A1Q8WWI5 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SLC44A1Q8WWI5 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
SLC44A1Q8WWI5 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
SLC44A1Q8WWI5 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SLC44A1Q8WWI5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC44A1Q8WWI5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.04■■□□□ 1.28
SLC44A1Q8WWI5 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
SLC44A1Q8WWI5 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC44A1Q8WWI5 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC44A1Q8WWI5 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC44A1Q8WWI5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.03■■□□□ 1.28
SLC44A1Q8WWI5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC44A1Q8WWI5 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC44A1Q8WWI5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC44A1Q8WWI5 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
SLC44A1Q8WWI5 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.02■■□□□ 1.28
SLC44A1Q8WWI5 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SLC44A1Q8WWI5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
SLC44A1Q8WWI5 DUSP8P3-201ENST00000399571 1760 ntBASIC23.02■■□□□ 1.28
SLC44A1Q8WWI5 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SLC44A1Q8WWI5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
SLC44A1Q8WWI5 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SLC44A1Q8WWI5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SLC44A1Q8WWI5 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.01■■□□□ 1.27
SLC44A1Q8WWI5 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SLC44A1Q8WWI5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SLC44A1Q8WWI5 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SLC44A1Q8WWI5 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.01■■□□□ 1.27
SLC44A1Q8WWI5 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
SLC44A1Q8WWI5 AL117328.2-201ENST00000624617 1940 ntBASIC23.01■■□□□ 1.27
SLC44A1Q8WWI5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
SLC44A1Q8WWI5 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SLC44A1Q8WWI5 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
SLC44A1Q8WWI5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23■■□□□ 1.27
SLC44A1Q8WWI5 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SLC44A1Q8WWI5 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SLC44A1Q8WWI5 SPCS2P3-201ENST00000500401 656 ntBASIC23■■□□□ 1.27
SLC44A1Q8WWI5 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
SLC44A1Q8WWI5 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SLC44A1Q8WWI5 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23■■□□□ 1.27
SLC44A1Q8WWI5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23■■□□□ 1.27
SLC44A1Q8WWI5 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
SLC44A1Q8WWI5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23■■□□□ 1.27
SLC44A1Q8WWI5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SLC44A1Q8WWI5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SLC44A1Q8WWI5 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.99■■□□□ 1.27
SLC44A1Q8WWI5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SLC44A1Q8WWI5 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
SLC44A1Q8WWI5 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
SLC44A1Q8WWI5 AL592295.1-201ENST00000400984 884 ntBASIC22.99■■□□□ 1.27
SLC44A1Q8WWI5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
SLC44A1Q8WWI5 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
SLC44A1Q8WWI5 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SLC44A1Q8WWI5 AC018755.3-202ENST00000596210 929 ntBASIC22.99■■□□□ 1.27
SLC44A1Q8WWI5 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.99■■□□□ 1.27
SLC44A1Q8WWI5 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SLC44A1Q8WWI5 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SLC44A1Q8WWI5 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SLC44A1Q8WWI5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms