Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBR4Q5T4S7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC12.97□□□□□ -0.33
UBR4Q5T4S7 AP004833.2-201ENST00000532228 1454 ntBASIC12.97□□□□□ -0.33
UBR4Q5T4S7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBR4Q5T4S7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBR4Q5T4S7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC12.96□□□□□ -0.33
UBR4Q5T4S7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UBR4Q5T4S7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC12.96□□□□□ -0.33
UBR4Q5T4S7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBR4Q5T4S7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBR4Q5T4S7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC12.96□□□□□ -0.33
UBR4Q5T4S7 AL445228.2-201ENST00000605589 952 ntBASIC12.96□□□□□ -0.33
UBR4Q5T4S7 AL135925.1-201ENST00000605920 1701 ntBASIC12.96□□□□□ -0.33
UBR4Q5T4S7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBR4Q5T4S7 MIR663A-201ENST00000385250 93 ntBASIC12.96□□□□□ -0.34
UBR4Q5T4S7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC12.96□□□□□ -0.34
UBR4Q5T4S7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
UBR4Q5T4S7 MIR6084-201ENST00000622012 110 ntBASIC12.96□□□□□ -0.34
UBR4Q5T4S7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC12.95□□□□□ -0.34
UBR4Q5T4S7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC12.95□□□□□ -0.34
UBR4Q5T4S7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBR4Q5T4S7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
UBR4Q5T4S7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC12.95□□□□□ -0.34
UBR4Q5T4S7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBR4Q5T4S7 GCSHP5-201ENST00000443090 522 ntBASIC12.95□□□□□ -0.34
UBR4Q5T4S7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBR4Q5T4S7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.95□□□□□ -0.34
UBR4Q5T4S7 MPST-208ENST00000628507 698 ntTSL 5 BASIC12.95□□□□□ -0.34
UBR4Q5T4S7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBR4Q5T4S7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 AC211429.1-201ENST00000415277 523 ntBASIC12.94□□□□□ -0.34
UBR4Q5T4S7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBR4Q5T4S7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBR4Q5T4S7 AP005435.1-201ENST00000529293 1178 ntBASIC12.93□□□□□ -0.34
UBR4Q5T4S7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBR4Q5T4S7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC12.93□□□□□ -0.34
UBR4Q5T4S7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBR4Q5T4S7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC12.93□□□□□ -0.34
UBR4Q5T4S7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
UBR4Q5T4S7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC12.93□□□□□ -0.34
UBR4Q5T4S7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC12.93□□□□□ -0.34
UBR4Q5T4S7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UBR4Q5T4S7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC12.93□□□□□ -0.34
UBR4Q5T4S7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UBR4Q5T4S7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
UBR4Q5T4S7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 SLC7A5P2-201ENST00000553010 536 ntBASIC12.91□□□□□ -0.34
UBR4Q5T4S7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 DUSP5P2-201ENST00000426873 1033 ntBASIC12.91□□□□□ -0.34
UBR4Q5T4S7 AC099791.2-201ENST00000605725 427 ntBASIC12.91□□□□□ -0.34
UBR4Q5T4S7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
UBR4Q5T4S7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBR4Q5T4S7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBR4Q5T4S7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UBR4Q5T4S7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBR4Q5T4S7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBR4Q5T4S7 KRT18P10-201ENST00000388836 1287 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms