RNA–Protein interactions for RNA: ENST00000561886.1

SMIM1-203, Transcript of small integral membrane protein 1 (Vel blood group), humanhuman

TSL 2 BASIC

Gene SMIM1, Length 491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1-203ENST00000561886 NISCHQ9Y2I1 1504 aa48.95■■■■■ 5.43
SMIM1-203ENST00000561886 ABCC9O60706 1549 aa44.54■■■■■ 4.72
SMIM1-203ENST00000561886 CCDC180Q9P1Z9 1646 aa43.99■■■■■ 4.63
SMIM1-203ENST00000561886 DNAJC5BQ9UF47 199 aa42.12■■■■■ 4.33
SMIM1-203ENST00000561886 RB1CC1Q8TDY2 1594 aa42.11■■■■■ 4.33
SMIM1-203ENST00000561886 NACADO15069 1562 aa41.71■■■■■ 4.27
SMIM1-203ENST00000561886 DCAF8L2P0C7V8 631 aa41.69■■■■■ 4.26
SMIM1-203ENST00000561886 PABPN1Q86U42 306 aaKnown RBP eCLIP41.47■■■■■ 4.23
SMIM1-203ENST00000561886 UNC13AQ9UPW8 1703 aa41.15■■■■■ 4.18
SMIM1-203ENST00000561886 MYO15BQ96JP2 1530 aa40.93■■■■■ 4.14
SMIM1-203ENST00000561886 BICRAQ9NZM4 1560 aa40.92■■■■■ 4.14
SMIM1-203ENST00000561886 ZCCHC6Q5VYS8 1495 aaKnown RBP40.46■■■■■ 4.07
SMIM1-203ENST00000561886 DCAF1Q9Y4B6 1507 aa40.32■■■■■ 4.04
SMIM1-203ENST00000561886 SCRIBQ14160 1630 aa40.21■■■■■ 4.03
SMIM1-203ENST00000561886 SHROOM4Q9ULL8 1493 aa40.2■■■■■ 4.03
SMIM1-203ENST00000561886 CC2D2AQ9P2K1 1620 aa40.13■■■■■ 4.02
SMIM1-203ENST00000561886 CECR2Q9BXF3 1484 aa40.11■■■■■ 4.01
SMIM1-203ENST00000561886 EIF4G1Q04637 1599 aaKnown RBP39.95■■■■□ 3.99
SMIM1-203ENST00000561886 DNAJC5Q9H3Z4 198 aa38.88■■■■□ 3.81
SMIM1-203ENST00000561886 NCAPD3P42695 1498 aa38.54■■■■□ 3.76
SMIM1-203ENST00000561886 ERCC6Q03468 1493 aa38.46■■■■□ 3.75
SMIM1-203ENST00000561886 CUX2O14529 1486 aa38.41■■■■□ 3.74
SMIM1-203ENST00000561886 ATAD2BQ9ULI0 1458 aa38.4■■■■□ 3.74
SMIM1-203ENST00000561886 SMARCA4P51532 1647 aa38.25■■■■□ 3.71
SMIM1-203ENST00000561886 SMARCA2P51531 1590 aa38.23■■■■□ 3.71
SMIM1-203ENST00000561886 HMGXB3Q12766 1538 aa38.18■■■■□ 3.7
SMIM1-203ENST00000561886 NESP48681 1621 aa38.15■■■■□ 3.7
SMIM1-203ENST00000561886 BAZ1BQ9UIG0 1483 aaKnown RBP38.03■■■■□ 3.68
SMIM1-203ENST00000561886 BAZ1AQ9NRL2 1556 aaPredicted RBP38■■■■□ 3.67
SMIM1-203ENST00000561886 PEG3Q9GZU2 1588 aa37.81■■■■□ 3.64
SMIM1-203ENST00000561886 MROH2BQ7Z745 1585 aa37.76■■■■□ 3.63
SMIM1-203ENST00000561886 THOC2Q8NI27 1593 aaKnown RBP37.73■■■■□ 3.63
SMIM1-203ENST00000561886 LAMC3Q9Y6N6 1575 aa37.71■■■■□ 3.63
SMIM1-203ENST00000561886 KIF21AQ7Z4S6 1674 aa37.58■■■■□ 3.61
SMIM1-203ENST00000561886 PDS5BQ9NTI5 1447 aa37.55■■■■□ 3.6
SMIM1-203ENST00000561886 CADPSQ9ULU8 1353 aa37.39■■■■□ 3.58
SMIM1-203ENST00000561886 WIZO95785 1651 aa37.28■■■■□ 3.56
SMIM1-203ENST00000561886 MRC2Q9UBG0 1479 aa37.26■■■■□ 3.55
SMIM1-203ENST00000561886 TRIM41Q8WV44 630 aa37.16■■■■□ 3.54
SMIM1-203ENST00000561886 WDR62O43379 1518 aa37.14■■■■□ 3.54
SMIM1-203ENST00000561886 CEP164Q9UPV0 1460 aa37.04■■■■□ 3.52
SMIM1-203ENST00000561886 FANCD2Q9BXW9 1451 aa36.98■■■■□ 3.51
SMIM1-203ENST00000561886 CFTRP13569 1480 aa36.86■■■■□ 3.49
SMIM1-203ENST00000561886 RSF1Q96T23 1441 aaPredicted RBP36.84■■■■□ 3.49
SMIM1-203ENST00000561886 TOP2AP11388 1531 aaKnown RBP36.75■■■■□ 3.47
SMIM1-203ENST00000561886 URB2Q14146 1524 aaKnown RBP36.7■■■■□ 3.47
SMIM1-203ENST00000561886 OSCARQ8IYS5 282 aa36.69■■■■□ 3.46
SMIM1-203ENST00000561886 CCDC88BA6NC98 1476 aa36.38■■■■□ 3.41
SMIM1-203ENST00000561886 PRDM2Q13029 1718 aa36.38■■■■□ 3.41
SMIM1-203ENST00000561886 ZNF608Q9ULD9 1512 aaPredicted RBP36.34■■■■□ 3.41
SMIM1-203ENST00000561886 IFT140Q96RY7 1462 aa36.3■■■■□ 3.4
SMIM1-203ENST00000561886 TOPBP1Q92547 1522 aa36.23■■■■□ 3.39
SMIM1-203ENST00000561886 RIMBP3CA6NJZ7 1639 aa36.22■■■■□ 3.39
SMIM1-203ENST00000561886 RIMBP3BA6NNM3 1639 aa36.22■■■■□ 3.39
SMIM1-203ENST00000561886 RIMBP3Q9UFD9 1639 aa36.22■■■■□ 3.39
SMIM1-203ENST00000561886 ARHGEF11O15085 1522 aa36.07■■■■□ 3.36
SMIM1-203ENST00000561886 EIF4G3O43432 1585 aaKnown RBP36.06■■■■□ 3.36
SMIM1-203ENST00000561886 ABCC8Q09428 1581 aa36.06■■■■□ 3.36
SMIM1-203ENST00000561886 DNMBPQ6XZF7 1577 aa36.03■■■■□ 3.36
SMIM1-203ENST00000561886 AQRO60306 1485 aaKnown RBP eCLIP35.99■■■■□ 3.357e-7■■■■■ 28.2
SMIM1-203ENST00000561886 CYB5RLQ6IPT4 315 aa35.93■■■■□ 3.34
SMIM1-203ENST00000561886 TARBP1Q13395 1621 aaKnown RBP35.9■■■■□ 3.34
SMIM1-203ENST00000561886 FBLN2P98095 1184 aa35.9■■■■□ 3.34
SMIM1-203ENST00000561886 CHD1O14646 1710 aa35.87■■■■□ 3.33
SMIM1-203ENST00000561886 POLA1P09884 1462 aaPredicted RBP35.84■■■■□ 3.33
SMIM1-203ENST00000561886 RAD54L2Q9Y4B4 1467 aa35.77■■■■□ 3.32
SMIM1-203ENST00000561886 TDRD9Q8NDG6 1382 aaKnown RBP35.72■■■■□ 3.31
SMIM1-203ENST00000561886 SOGA1O94964 1423 aa35.7■■■■□ 3.31
SMIM1-203ENST00000561886 ARAP1Q96P48 1450 aa35.7■■■■□ 3.31
SMIM1-203ENST00000561886 TRHP20396 242 aaPredicted RBP35.67■■■■□ 3.3
SMIM1-203ENST00000561886 FGD5Q6ZNL6 1462 aa35.58■■■■□ 3.29
SMIM1-203ENST00000561886 SNAPC4Q5SXM2 1469 aa35.57■■■■□ 3.28
SMIM1-203ENST00000561886 CHMP7Q8WUX9 453 aaPredicted RBP35.51■■■■□ 3.28
SMIM1-203ENST00000561886 CUX1P39880 1505 aa35.48■■■■□ 3.27
SMIM1-203ENST00000561886 CLASP1Q7Z460 1538 aa35.42■■■■□ 3.26
SMIM1-203ENST00000561886 WDR97A6NE52 1622 aa35.42■■■■□ 3.26
SMIM1-203ENST00000561886 GRIN2BQ13224 1484 aa35.4■■■■□ 3.26
SMIM1-203ENST00000561886 MAGI1Q96QZ7 1491 aaPredicted RBP35.4■■■■□ 3.26
SMIM1-203ENST00000561886 SYNJ1O43426 1573 aa35.38■■■■□ 3.25
SMIM1-203ENST00000561886 SYNJ2O15056 1496 aa35.31■■■■□ 3.24
SMIM1-203ENST00000561886 GAPVD1Q14C86 1478 aa35.24■■■■□ 3.23
SMIM1-203ENST00000561886 PBRM1Q86U86 1689 aa35.21■■■■□ 3.23
SMIM1-203ENST00000561886 ABCA10Q8WWZ4 1543 aa35.11■■■■□ 3.21
SMIM1-203ENST00000561886 SUPT5HO00267 1087 aaKnown RBP35.1■■■■□ 3.21
SMIM1-203ENST00000561886 ABCA5Q8WWZ7 1642 aa35.08■■■■□ 3.21
SMIM1-203ENST00000561886 GRIN2AQ12879 1464 aa34.94■■■■□ 3.18
SMIM1-203ENST00000561886 ERCC6L2Q5T890 1561 aa34.93■■■■□ 3.18
SMIM1-203ENST00000561886 WRNQ14191 1432 aaPredicted RBP eCLIP34.93■■■■□ 3.18
SMIM1-203ENST00000561886 AEBP2Q6ZN18 517 aaPredicted RBP34.88■■■■□ 3.17
SMIM1-203ENST00000561886 ADAMTS12P58397 1594 aa34.86■■■■□ 3.17
SMIM1-203ENST00000561886 CEP170Q5SW79 1584 aa34.84■■■■□ 3.17
SMIM1-203ENST00000561886 NUP160Q12769 1436 aa34.81■■■■□ 3.16
SMIM1-203ENST00000561886 TOP2BQ02880 1626 aa34.77■■■■□ 3.16
SMIM1-203ENST00000561886 FHAD1B1AJZ9 1412 aa34.76■■■■□ 3.16
SMIM1-203ENST00000561886 BIVM-ERCC5R4GMW8 1640 aa34.76■■■■□ 3.15
SMIM1-203ENST00000561886 SHROOM2Q13796 1616 aa34.66■■■■□ 3.14
SMIM1-203ENST00000561886 ERICH3Q5RHP9 1530 aa34.64■■■■□ 3.14
SMIM1-203ENST00000561886 PRG4Q92954 1404 aaPredicted RBP34.58■■■■□ 3.13
SMIM1-203ENST00000561886 JPH4Q96JJ6 628 aa34.53■■■■□ 3.12
SMIM1-203ENST00000561886 KIF13AQ9H1H9 1805 aa34.41■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms