Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC31.56■■■□□ 2.64
USP6P35125 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
USP6P35125 STK32C-205ENST00000456004 607 ntTSL 2 BASIC31.55■■■□□ 2.64
USP6P35125 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
USP6P35125 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
USP6P35125 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
USP6P35125 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC31.55■■■□□ 2.64
USP6P35125 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
USP6P35125 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
USP6P35125 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC31.55■■■□□ 2.64
USP6P35125 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC31.54■■■□□ 2.64
USP6P35125 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC31.54■■■□□ 2.64
USP6P35125 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
USP6P35125 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC31.54■■■□□ 2.64
USP6P35125 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
USP6P35125 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
USP6P35125 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
USP6P35125 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC31.52■■■□□ 2.64
USP6P35125 MIR4767-201ENST00000582827 78 ntBASIC31.52■■■□□ 2.64
USP6P35125 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC31.52■■■□□ 2.64
USP6P35125 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
USP6P35125 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC31.51■■■□□ 2.64
USP6P35125 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC31.51■■■□□ 2.64
USP6P35125 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC31.51■■■□□ 2.63
USP6P35125 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
USP6P35125 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
USP6P35125 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC31.51■■■□□ 2.63
USP6P35125 SERBP1P1-201ENST00000396021 1160 ntBASIC31.5■■■□□ 2.63
USP6P35125 PTMA-205ENST00000410064 814 ntTSL 2 BASIC31.5■■■□□ 2.63
USP6P35125 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
USP6P35125 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
USP6P35125 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
USP6P35125 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
USP6P35125 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
USP6P35125 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC31.49■■■□□ 2.63
USP6P35125 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
USP6P35125 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
USP6P35125 SYT6-210ENST00000641643 1587 ntBASIC31.49■■■□□ 2.63
USP6P35125 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
USP6P35125 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC31.49■■■□□ 2.63
USP6P35125 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
USP6P35125 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
USP6P35125 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
USP6P35125 PTCHD3P2-201ENST00000424937 1205 ntBASIC31.49■■■□□ 2.63
USP6P35125 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC31.49■■■□□ 2.63
USP6P35125 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC31.49■■■□□ 2.63
USP6P35125 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC31.49■■■□□ 2.63
USP6P35125 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
USP6P35125 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
USP6P35125 AC009102.2-201ENST00000606772 1639 ntBASIC31.48■■■□□ 2.63
USP6P35125 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC31.48■■■□□ 2.63
USP6P35125 HYI-206ENST00000372434 1025 ntTSL 5 BASIC31.48■■■□□ 2.63
USP6P35125 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
USP6P35125 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC31.47■■■□□ 2.63
USP6P35125 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
USP6P35125 AC091305.1-201ENST00000479476 895 ntBASIC31.47■■■□□ 2.63
USP6P35125 AC092171.4-201ENST00000609130 632 ntBASIC31.47■■■□□ 2.63
USP6P35125 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
USP6P35125 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
USP6P35125 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
USP6P35125 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
USP6P35125 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
USP6P35125 AC099791.2-201ENST00000605725 427 ntBASIC31.45■■■□□ 2.63
USP6P35125 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
USP6P35125 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC31.44■■■□□ 2.62
USP6P35125 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
USP6P35125 C17orf82-201ENST00000623772 1530 ntBASIC31.44■■■□□ 2.62
USP6P35125 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
USP6P35125 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
USP6P35125 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
USP6P35125 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
USP6P35125 AC011298.3-201ENST00000615796 283 ntBASIC31.43■■■□□ 2.62
USP6P35125 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
USP6P35125 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC31.43■■■□□ 2.62
USP6P35125 LSR-205ENST00000427250 1606 ntTSL 2 BASIC31.42■■■□□ 2.62
USP6P35125 AL022069.1-201ENST00000568025 1636 ntBASIC31.42■■■□□ 2.62
USP6P35125 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC31.41■■■□□ 2.62
USP6P35125 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC31.41■■■□□ 2.62
USP6P35125 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC31.41■■■□□ 2.62
USP6P35125 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
USP6P35125 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
USP6P35125 CEBPA-AS1-201ENST00000592982 2198 ntBASIC31.41■■■□□ 2.62
USP6P35125 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
USP6P35125 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
USP6P35125 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC31.41■■■□□ 2.62
USP6P35125 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC31.41■■■□□ 2.62
USP6P35125 MAG-206ENST00000597035 542 ntTSL 4 BASIC31.41■■■□□ 2.62
USP6P35125 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
USP6P35125 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
USP6P35125 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
USP6P35125 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
USP6P35125 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
USP6P35125 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
USP6P35125 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
USP6P35125 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
USP6P35125 STOX2-205ENST00000513034 807 ntTSL 3 BASIC31.39■■■□□ 2.62
USP6P35125 AL138724.1-201ENST00000606771 1088 ntBASIC31.39■■■□□ 2.62
USP6P35125 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
USP6P35125 CD37-213ENST00000598095 1598 ntTSL 2 BASIC31.38■■■□□ 2.61
USP6P35125 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC31.38■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms