Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
SCN10AQ9Y5Y9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.73■■□□□ 1.71
SCN10AQ9Y5Y9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SCN10AQ9Y5Y9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCN10AQ9Y5Y9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
SCN10AQ9Y5Y9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SCN10AQ9Y5Y9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.72■■□□□ 1.71
SCN10AQ9Y5Y9 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCN10AQ9Y5Y9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
SCN10AQ9Y5Y9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.72■■□□□ 1.71
SCN10AQ9Y5Y9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SCN10AQ9Y5Y9 DUX4L19-201ENST00000557448 1267 ntBASIC25.71■■□□□ 1.71
SCN10AQ9Y5Y9 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SCN10AQ9Y5Y9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SCN10AQ9Y5Y9 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.71■■□□□ 1.71
SCN10AQ9Y5Y9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SCN10AQ9Y5Y9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SCN10AQ9Y5Y9 AC105265.2-201ENST00000467189 838 ntBASIC25.71■■□□□ 1.71
SCN10AQ9Y5Y9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.71■■□□□ 1.71
SCN10AQ9Y5Y9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SCN10AQ9Y5Y9 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
SCN10AQ9Y5Y9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SCN10AQ9Y5Y9 MIR939-201ENST00000401314 82 ntBASIC25.7■■□□□ 1.7
SCN10AQ9Y5Y9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.7■■□□□ 1.7
SCN10AQ9Y5Y9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.7■■□□□ 1.7
SCN10AQ9Y5Y9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
SCN10AQ9Y5Y9 AL355001.2-201ENST00000620617 1191 ntBASIC25.7■■□□□ 1.7
SCN10AQ9Y5Y9 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SCN10AQ9Y5Y9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SCN10AQ9Y5Y9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
SCN10AQ9Y5Y9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
SCN10AQ9Y5Y9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SCN10AQ9Y5Y9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.69■■□□□ 1.7
SCN10AQ9Y5Y9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
SCN10AQ9Y5Y9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
SCN10AQ9Y5Y9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SCN10AQ9Y5Y9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SCN10AQ9Y5Y9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SCN10AQ9Y5Y9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SCN10AQ9Y5Y9 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SCN10AQ9Y5Y9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SCN10AQ9Y5Y9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.68■■□□□ 1.7
SCN10AQ9Y5Y9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SCN10AQ9Y5Y9 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.67■■□□□ 1.7
SCN10AQ9Y5Y9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SCN10AQ9Y5Y9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SCN10AQ9Y5Y9 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SCN10AQ9Y5Y9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SCN10AQ9Y5Y9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SCN10AQ9Y5Y9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
SCN10AQ9Y5Y9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC25.66■■□□□ 1.7
SCN10AQ9Y5Y9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SCN10AQ9Y5Y9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.66■■□□□ 1.7
SCN10AQ9Y5Y9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SCN10AQ9Y5Y9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SCN10AQ9Y5Y9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.65■■□□□ 1.7
SCN10AQ9Y5Y9 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.65■■□□□ 1.7
SCN10AQ9Y5Y9 AL136967.2-201ENST00000623968 743 ntBASIC25.65■■□□□ 1.7
SCN10AQ9Y5Y9 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SCN10AQ9Y5Y9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SCN10AQ9Y5Y9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SCN10AQ9Y5Y9 MIR6089-201ENST00000616698 64 ntBASIC25.65■■□□□ 1.7
SCN10AQ9Y5Y9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
SCN10AQ9Y5Y9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SCN10AQ9Y5Y9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
SCN10AQ9Y5Y9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SCN10AQ9Y5Y9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.64■■□□□ 1.69
SCN10AQ9Y5Y9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
SCN10AQ9Y5Y9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.63■■□□□ 1.69
SCN10AQ9Y5Y9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SCN10AQ9Y5Y9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SCN10AQ9Y5Y9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
SCN10AQ9Y5Y9 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
SCN10AQ9Y5Y9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SCN10AQ9Y5Y9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SCN10AQ9Y5Y9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.63■■□□□ 1.69
SCN10AQ9Y5Y9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SCN10AQ9Y5Y9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
SCN10AQ9Y5Y9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SCN10AQ9Y5Y9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
SCN10AQ9Y5Y9 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
SCN10AQ9Y5Y9 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.62■■□□□ 1.69
SCN10AQ9Y5Y9 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.62■■□□□ 1.69
SCN10AQ9Y5Y9 AL121749.1-202ENST00000609313 2153 ntBASIC25.62■■□□□ 1.69
SCN10AQ9Y5Y9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SCN10AQ9Y5Y9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
SCN10AQ9Y5Y9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SCN10AQ9Y5Y9 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.62■■□□□ 1.69
SCN10AQ9Y5Y9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
SCN10AQ9Y5Y9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
SCN10AQ9Y5Y9 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SCN10AQ9Y5Y9 SERBP1P1-201ENST00000396021 1160 ntBASIC25.61■■□□□ 1.69
SCN10AQ9Y5Y9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.61■■□□□ 1.69
SCN10AQ9Y5Y9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.61■■□□□ 1.69
SCN10AQ9Y5Y9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.61■■□□□ 1.69
SCN10AQ9Y5Y9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SCN10AQ9Y5Y9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.6■■□□□ 1.69
SCN10AQ9Y5Y9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.6■■□□□ 1.69
SCN10AQ9Y5Y9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.6■■□□□ 1.69
SCN10AQ9Y5Y9 SLC6A10P-202ENST00000431994 2058 ntBASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms