Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
POLR2J3Q9H1A7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
POLR2J3Q9H1A7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.28■■□□□ 1
POLR2J3Q9H1A7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.28■■□□□ 1
POLR2J3Q9H1A7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.28■■□□□ 1
POLR2J3Q9H1A7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
POLR2J3Q9H1A7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
POLR2J3Q9H1A7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
POLR2J3Q9H1A7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.28■■□□□ 1
POLR2J3Q9H1A7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
POLR2J3Q9H1A7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
POLR2J3Q9H1A7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.27■■□□□ 1
POLR2J3Q9H1A7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
POLR2J3Q9H1A7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
POLR2J3Q9H1A7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.27■■□□□ 1
POLR2J3Q9H1A7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.27■■□□□ 1
POLR2J3Q9H1A7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
POLR2J3Q9H1A7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
POLR2J3Q9H1A7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
POLR2J3Q9H1A7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.26■□□□□ 0.99
POLR2J3Q9H1A7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
POLR2J3Q9H1A7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
POLR2J3Q9H1A7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.26■□□□□ 0.99
POLR2J3Q9H1A7 AC087393.1-201ENST00000582896 145 ntBASIC21.26■□□□□ 0.99
POLR2J3Q9H1A7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
POLR2J3Q9H1A7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.26■□□□□ 0.99
POLR2J3Q9H1A7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
POLR2J3Q9H1A7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
POLR2J3Q9H1A7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
POLR2J3Q9H1A7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
POLR2J3Q9H1A7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
POLR2J3Q9H1A7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.25■□□□□ 0.99
POLR2J3Q9H1A7 AL592295.1-201ENST00000400984 884 ntBASIC21.25■□□□□ 0.99
POLR2J3Q9H1A7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
POLR2J3Q9H1A7 AL592293.1-201ENST00000502889 1188 ntBASIC21.25■□□□□ 0.99
POLR2J3Q9H1A7 AL161729.1-201ENST00000604104 1402 ntBASIC21.24■□□□□ 0.99
POLR2J3Q9H1A7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.24■□□□□ 0.99
POLR2J3Q9H1A7 AC090877.2-201ENST00000558441 1738 ntBASIC21.24■□□□□ 0.99
POLR2J3Q9H1A7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
POLR2J3Q9H1A7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
POLR2J3Q9H1A7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
POLR2J3Q9H1A7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.23■□□□□ 0.99
POLR2J3Q9H1A7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
POLR2J3Q9H1A7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.23■□□□□ 0.99
POLR2J3Q9H1A7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
POLR2J3Q9H1A7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.23■□□□□ 0.99
POLR2J3Q9H1A7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.23■□□□□ 0.99
POLR2J3Q9H1A7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
POLR2J3Q9H1A7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
POLR2J3Q9H1A7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
POLR2J3Q9H1A7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
POLR2J3Q9H1A7 MIR6765-201ENST00000614092 87 ntBASIC21.22■□□□□ 0.99
POLR2J3Q9H1A7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.22■□□□□ 0.99
POLR2J3Q9H1A7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.22■□□□□ 0.99
POLR2J3Q9H1A7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
POLR2J3Q9H1A7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
POLR2J3Q9H1A7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
POLR2J3Q9H1A7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
POLR2J3Q9H1A7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
POLR2J3Q9H1A7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
POLR2J3Q9H1A7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.21■□□□□ 0.99
POLR2J3Q9H1A7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
POLR2J3Q9H1A7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.21■□□□□ 0.99
POLR2J3Q9H1A7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
POLR2J3Q9H1A7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.21■□□□□ 0.99
POLR2J3Q9H1A7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
POLR2J3Q9H1A7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
POLR2J3Q9H1A7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
POLR2J3Q9H1A7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.2■□□□□ 0.98
POLR2J3Q9H1A7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
POLR2J3Q9H1A7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
POLR2J3Q9H1A7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
POLR2J3Q9H1A7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.2■□□□□ 0.98
POLR2J3Q9H1A7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
POLR2J3Q9H1A7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.2■□□□□ 0.98
POLR2J3Q9H1A7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.2■□□□□ 0.98
POLR2J3Q9H1A7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
POLR2J3Q9H1A7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
POLR2J3Q9H1A7 SPCS2P3-201ENST00000500401 656 ntBASIC21.2■□□□□ 0.98
POLR2J3Q9H1A7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
POLR2J3Q9H1A7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
POLR2J3Q9H1A7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
POLR2J3Q9H1A7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
POLR2J3Q9H1A7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
POLR2J3Q9H1A7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.2■□□□□ 0.98
POLR2J3Q9H1A7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
POLR2J3Q9H1A7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
POLR2J3Q9H1A7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
POLR2J3Q9H1A7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
POLR2J3Q9H1A7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
POLR2J3Q9H1A7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.19■□□□□ 0.98
POLR2J3Q9H1A7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.19■□□□□ 0.98
POLR2J3Q9H1A7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.19■□□□□ 0.98
POLR2J3Q9H1A7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
POLR2J3Q9H1A7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
POLR2J3Q9H1A7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
POLR2J3Q9H1A7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.19■□□□□ 0.98
POLR2J3Q9H1A7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
POLR2J3Q9H1A7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
POLR2J3Q9H1A7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms