Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 HMBS-206ENST00000535793 832 ntTSL 59.98□□□□□ -0.813e-9■■■■■ 32.3
U2AF2P26368 HMBS-213ENST00000542345 882 ntTSL 37.82□□□□□ -1.163e-9■■■■■ 32.3
U2AF2P26368 HMBS-204ENST00000534956 547 ntTSL 56.59□□□□□ -1.353e-9■■■■■ 32.3
U2AF2P26368 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.36■□□□□ 0.534e-8■■■■■ 32.3
U2AF2P26368 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.234e-8■■■■■ 32.3
U2AF2P26368 WASHC3-204ENST00000535501 921 ntTSL 214.34□□□□□ -0.114e-8■■■■■ 32.3
U2AF2P26368 WASHC3-212ENST00000544341 945 ntTSL 313.01□□□□□ -0.334e-8■■■■■ 32.3
U2AF2P26368 WASHC3-209ENST00000540536 883 ntTSL 39.66□□□□□ -0.864e-8■■■■■ 32.3
U2AF2P26368 WASHC3-207ENST00000538761 886 ntTSL 38.04□□□□□ -1.124e-8■■■■■ 32.3
U2AF2P26368 WASHC3-211ENST00000542923 477 ntTSL 37.11□□□□□ -1.273e-8■■■■■ 32.3
U2AF2P26368 WASHC3-205ENST00000536197 879 ntTSL 24.04□□□□□ -1.763e-8■■■■■ 32.3
U2AF2P26368 INTS10-206ENST00000520670 623 ntTSL 512.75□□□□□ -0.376e-7■■■■■ 32.2
U2AF2P26368 INTS10-216ENST00000523772 777 ntTSL 512.75□□□□□ -0.376e-7■■■■■ 32.2
U2AF2P26368 INTS10-209ENST00000521008 572 ntTSL 312.35□□□□□ -0.436e-7■■■■■ 32.2
U2AF2P26368 INTS10-207ENST00000520827 631 ntTSL 39.41□□□□□ -0.96e-7■■■■■ 32.2
U2AF2P26368 LRCH3-208ENST00000443727 611 ntTSL 422.33■■□□□ 1.177e-11■■■■■ 32.2
U2AF2P26368 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.629e-8■■■■■ 32.2
U2AF2P26368 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.469e-11■■■■■ 32.2
U2AF2P26368 DDB1-216ENST00000539739 1624 ntTSL 517.61■□□□□ 0.419e-8■■■■■ 32.2
U2AF2P26368 DDB1-218ENST00000540784 1119 ntTSL 317.6■□□□□ 0.419e-8■■■■■ 32.2
U2AF2P26368 POMT1-215ENST00000485278 3420 ntTSL 214.53□□□□□ -0.089e-8■■■■■ 32.2
U2AF2P26368 DDB1-207ENST00000535967 1404 ntTSL 314.36□□□□□ -0.119e-8■■■■■ 32.2
U2AF2P26368 DDB1-209ENST00000537877 1375 ntTSL 214.22□□□□□ -0.139e-8■■■■■ 32.2
U2AF2P26368 STAG3L4-202ENST00000416602 2143 ntTSL 2 BASIC13.55□□□□□ -0.247e-21■■■■■ 32.2
U2AF2P26368 SH3RF1-205ENST00000511421 1657 ntTSL 1 (best)13.02□□□□□ -0.329e-8■■■■■ 32.2
U2AF2P26368 STAG3L4-203ENST00000472361 1039 ntTSL 512.86□□□□□ -0.357e-21■■■■■ 32.2
U2AF2P26368 SH3RF1-203ENST00000508685 2020 ntTSL 1 (best)12.61□□□□□ -0.399e-8■■■■■ 32.2
U2AF2P26368 DDB1-204ENST00000535147 2789 ntTSL 212.09□□□□□ -0.479e-8■■■■■ 32.2
U2AF2P26368 DDB1-202ENST00000414411 1904 ntTSL 211.33□□□□□ -0.69e-8■■■■■ 32.2
U2AF2P26368 DDB1-217ENST00000540166 3906 ntTSL 210.4□□□□□ -0.749e-11■■■■■ 32.2
U2AF2P26368 STAG3L4-201ENST00000352103 530 ntBASIC7.56□□□□□ -1.27e-21■■■■■ 32.2
U2AF2P26368 SBF2-201ENST00000256190 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.641e-7■■■■■ 32.1
U2AF2P26368 TUBE1-208ENST00000604743 959 ntTSL 316.13■□□□□ 0.171e-7■■■■■ 32.1
U2AF2P26368 TUBE1-211ENST00000605457 1645 ntTSL 516.07■□□□□ 0.161e-7■■■■■ 32.1
U2AF2P26368 TUBE1-202ENST00000368662 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.141e-7■■■■■ 32.1
U2AF2P26368 C9orf85-205ENST00000479413 902 ntTSL 1 (best)15.57■□□□□ 0.081e-7■■■■■ 32.1
U2AF2P26368 C9orf85-204ENST00000473252 678 ntTSL 514.2□□□□□ -0.141e-7■■■■■ 32.1
U2AF2P26368 C9orf85-206ENST00000486911 3321 ntTSL 5 BASIC12.56□□□□□ -0.41e-7■■■■■ 32.1
U2AF2P26368 C9orf85-201ENST00000334731 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.411e-7■■■■■ 32.1
U2AF2P26368 C9orf85-203ENST00000377031 1107 ntTSL 3 BASIC11.43□□□□□ -0.581e-7■■■■■ 32.1
U2AF2P26368 C9orf85-202ENST00000377027 539 ntTSL 310.48□□□□□ -0.731e-7■■■■■ 32.1
U2AF2P26368 CYP27A1-204ENST00000466602 1210 ntTSL 225.83■■□□□ 1.732e-9■■■■■ 32.1
U2AF2P26368 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.342e-9■■■■■ 32.1
U2AF2P26368 CYP27A1-205ENST00000494263 2566 ntTSL 221.29■■□□□ 12e-9■■■■■ 32.1
U2AF2P26368 CYP27A1-203ENST00000445971 903 ntTSL 519.48■□□□□ 0.712e-9■■■■■ 32.1
U2AF2P26368 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.368e-9■■■■■ 32.1
U2AF2P26368 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.448e-9■■■■■ 32.1
U2AF2P26368 CGGBP1-203ENST00000462901 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.328e-9■■■■■ 32.1
U2AF2P26368 CGGBP1-204ENST00000467332 556 ntTSL 47.98□□□□□ -1.138e-9■■■■■ 32.1
U2AF2P26368 CTC1-209ENST00000581729 569 ntAPPRIS ALT2 TSL 34.62□□□□□ -1.674e-8■■■■■ 32.1
U2AF2P26368 SEH1L-203ENST00000585730 582 ntTSL 219.75■□□□□ 0.752e-11■■■■■ 32.1
U2AF2P26368 SEH1L-206ENST00000589446 655 ntTSL 518.97■□□□□ 0.632e-11■■■■■ 32.1
U2AF2P26368 SEH1L-205ENST00000588251 789 ntTSL 318.88■□□□□ 0.612e-11■■■■■ 32.1
U2AF2P26368 SEH1L-204ENST00000587761 863 ntTSL 515.14■□□□□ 0.012e-11■■■■■ 32.1
U2AF2P26368 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.011e-10■■■■■ 32.1
U2AF2P26368 NCAPG-205ENST00000514176 3017 ntTSL 1 (best)13.32□□□□□ -0.281e-10■■■■■ 32.1
U2AF2P26368 NCAPG-202ENST00000509719 537 ntTSL 52.73□□□□□ -1.971e-10■■■■■ 32.1
U2AF2P26368 SLC38A10-206ENST00000540966 896 ntTSL 318.8■□□□□ 0.61e-13■■■■■ 32
U2AF2P26368 SLC38A10-211ENST00000576151 774 ntTSL 217.22■□□□□ 0.351e-13■■■■■ 32
U2AF2P26368 SLC38A10-207ENST00000542075 2903 ntTSL 217.01■□□□□ 0.311e-13■■■■■ 32
U2AF2P26368 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.311e-13■■■■■ 32
U2AF2P26368 RMND1-203ENST00000444024 743 ntTSL 316.57■□□□□ 0.242e-23■■■■■ 32
U2AF2P26368 RETREG3-204ENST00000586796 576 ntTSL 224.26■■□□□ 1.471e-14■■■■■ 32
U2AF2P26368 RETREG3-210ENST00000590541 409 ntTSL 418.87■□□□□ 0.611e-14■■■■■ 32
U2AF2P26368 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.186e-8■■■■■ 32
U2AF2P26368 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.846e-8■■■■■ 32
U2AF2P26368 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.846e-8■■■■■ 32
U2AF2P26368 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.846e-8■■■■■ 32
U2AF2P26368 DIAPH1-211ENST00000518047 4668 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.496e-8■■■■■ 32
U2AF2P26368 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.6■□□□□ 0.892e-6■■■■■ 32
U2AF2P26368 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.242e-6■■■■■ 32
U2AF2P26368 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.022e-6■■■■■ 32
U2AF2P26368 ELAVL1-204ENST00000596154 880 ntTSL 39.23□□□□□ -0.932e-6■■■■■ 32
U2AF2P26368 SRRM1-218ENST00000494934 802 ntTSL 33.52□□□□□ -1.854e-11■■■■■ 32
U2AF2P26368 SRRM1-213ENST00000485441 561 ntTSL 33.16□□□□□ -1.94e-12■■■■■ 32
U2AF2P26368 SRRM1-219ENST00000495561 563 ntTSL 22.79□□□□□ -1.964e-11■■■■■ 32
U2AF2P26368 EIF2B5-205ENST00000468748 673 ntTSL 48.21□□□□□ -1.11e-6■■■■■ 31.9
U2AF2P26368 EIF2B5-208ENST00000479833 476 ntTSL 54.23□□□□□ -1.731e-6■■■■■ 31.9
U2AF2P26368 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.273e-18■■■■■ 31.9
U2AF2P26368 SOX5-209ENST00000536911 855 ntTSL 310.52□□□□□ -0.731e-7■■■■■ 31.9
U2AF2P26368 THADA-218ENST00000486735 564 ntTSL 413.94□□□□□ -0.182e-7■■■■■ 31.9
U2AF2P26368 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC8.3□□□□□ -1.088e-9■■■■■ 31.9
U2AF2P26368 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.26□□□□□ -1.254e-9■■■■■ 31.9
U2AF2P26368 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC17.3■□□□□ 0.366e-7■■■■■ 31.9
U2AF2P26368 AGO3-207ENST00000634486 3599 ntTSL 516.98■□□□□ 0.316e-7■■■■■ 31.9
U2AF2P26368 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.56e-7■■■■■ 31.9
U2AF2P26368 ATXN2L-223ENST00000568266 1294 ntTSL 519.29■□□□□ 0.689e-10■■■■■ 31.9
U2AF2P26368 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.534e-13■■■■■ 31.8
U2AF2P26368 WSB1-212ENST00000583096 834 ntTSL 32.89□□□□□ -1.952e-9■■■■■ 31.8
U2AF2P26368 KLHDC10-202ENST00000463413 503 ntTSL 228.67■■■□□ 2.189e-8■■■■■ 31.8
U2AF2P26368 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.849e-8■■■■■ 31.8
U2AF2P26368 KLHDC10-203ENST00000468226 772 ntTSL 38.12□□□□□ -1.119e-8■■■■■ 31.8
U2AF2P26368 URI1-204ENST00000570704 559 ntTSL 41.72□□□□□ -2.131e-6■■■■■ 31.8
U2AF2P26368 URI1-212ENST00000576442 578 ntTSL 41.61□□□□□ -2.151e-6■■■■■ 31.8
U2AF2P26368 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.43e-7■■■■■ 31.7
U2AF2P26368 SASS6-202ENST00000462159 3972 ntTSL 1 (best)5.85□□□□□ -1.473e-7■■■■■ 31.7
U2AF2P26368 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.832e-8■■■■■ 31.7
U2AF2P26368 CDON-204ENST00000527967 722 ntTSL 325.73■■□□□ 1.712e-8■■■■■ 31.7
U2AF2P26368 AC010132.3-202ENST00000433579 1231 ntAPPRIS ALT2 TSL 225.14■■□□□ 1.622e-8■■■■■ 31.7
U2AF2P26368 RNF8-201ENST00000229866 2124 ntTSL 225■■□□□ 1.592e-8■■■■■ 31.7
Retrieved 100 of 36,523 protein–RNA pairs in 577.9 ms