RNA–Protein interactions for RNA: ENST00000581729.1

CTC1-209, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 3

Gene CTC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-209ENST00000581729 AEBP2Q6ZN18 517 aaPredicted RBP13.56□□□□□ -0.24
CTC1-209ENST00000581729 CHIC1Q5VXU3 224 aa12.86□□□□□ -0.35
CTC1-209ENST00000581729 SENP3Q9H4L4 574 aaPredicted RBP11.86□□□□□ -0.51
CTC1-209ENST00000581729 POTEDQ86YR6 584 aa11.85□□□□□ -0.51
CTC1-209ENST00000581729 PHF23Q9BUL5 403 aaPredicted RBP11.55□□□□□ -0.56
CTC1-209ENST00000581729 FOXD1Q16676 465 aa11.07□□□□□ -0.64
CTC1-209ENST00000581729 NISCHQ9Y2I1 1504 aa10.99□□□□□ -0.65
CTC1-209ENST00000581729 MSH5O43196 834 aa10.79□□□□□ -0.68
CTC1-209ENST00000581729 ABCC9O60706 1549 aa10.4□□□□□ -0.74
CTC1-209ENST00000581729 PIAS4Q8N2W9 510 aaPredicted RBP10.24□□□□□ -0.77
CTC1-209ENST00000581729 DNAJC5BQ9UF47 199 aa10.15□□□□□ -0.78
CTC1-209ENST00000581729 CCDC180Q9P1Z9 1646 aa9.94□□□□□ -0.82
CTC1-209ENST00000581729 CACNB1Q02641 598 aaPredicted RBP9.81□□□□□ -0.84
CTC1-209ENST00000581729 ADRA2BP18089 450 aa9.65□□□□□ -0.86
CTC1-209ENST00000581729 PABPN1Q86U42 306 aaKnown RBP eCLIP9.65□□□□□ -0.86
CTC1-209ENST00000581729 PPP6R1Q9UPN7 881 aa9.65□□□□□ -0.86
CTC1-209ENST00000581729 RB1CC1Q8TDY2 1594 aa9.64□□□□□ -0.87
CTC1-209ENST00000581729 NACADO15069 1562 aa9.49□□□□□ -0.89
CTC1-209ENST00000581729 BICRAQ9NZM4 1560 aa9.49□□□□□ -0.89
CTC1-209ENST00000581729 UNC13AQ9UPW8 1703 aa9.48□□□□□ -0.89
CTC1-209ENST00000581729 DNAJC5Q9H3Z4 198 aa9.45□□□□□ -0.9
CTC1-209ENST00000581729 DCAF8L2P0C7V8 631 aa9.42□□□□□ -0.9
CTC1-209ENST00000581729 PLPPR3Q6T4P5 718 aa9.42□□□□□ -0.9
CTC1-209ENST00000581729 CECR2Q9BXF3 1484 aa9.37□□□□□ -0.91
CTC1-209ENST00000581729 CC2D2AQ9P2K1 1620 aa9.34□□□□□ -0.91
CTC1-209ENST00000581729 EIF4G1Q04637 1599 aaKnown RBP9.24□□□□□ -0.93
CTC1-209ENST00000581729 MYO15BQ96JP2 1530 aa9.23□□□□□ -0.93
CTC1-209ENST00000581729 DMRT2Q9Y5R5 561 aa9.22□□□□□ -0.93
CTC1-209ENST00000581729 SHROOM4Q9ULL8 1493 aa9.18□□□□□ -0.94
CTC1-209ENST00000581729 POTEHQ6S545 545 aa9.17□□□□□ -0.94
CTC1-209ENST00000581729 SCRIBQ14160 1630 aa9.14□□□□□ -0.95
CTC1-209ENST00000581729 MAPK8IP2Q13387 824 aaPredicted RBP9.09□□□□□ -0.95
CTC1-209ENST00000581729 DCAF8L1A6NGE4 600 aa9.08□□□□□ -0.96
CTC1-209ENST00000581729 ZCCHC6Q5VYS8 1495 aaKnown RBP9.06□□□□□ -0.96
CTC1-209ENST00000581729 RNF39Q9H2S5 420 aa9.03□□□□□ -0.96
CTC1-209ENST00000581729 CUX2O14529 1486 aa9.02□□□□□ -0.96
CTC1-209ENST00000581729 DCAF1Q9Y4B6 1507 aa9□□□□□ -0.97
CTC1-209ENST00000581729 SCAF1Q9H7N4 1312 aaKnown RBP9□□□□□ -0.97
CTC1-209ENST00000581729 C1QBPQ07021 282 aaKnown RBP8.93□□□□□ -0.98
CTC1-209ENST00000581729 ERCC6Q03468 1493 aa8.93□□□□□ -0.98
CTC1-209ENST00000581729 TRIM41Q8WV44 630 aa8.92□□□□□ -0.98
CTC1-209ENST00000581729 NESP48681 1621 aa8.87□□□□□ -0.99
CTC1-209ENST00000581729 NCAPD3P42695 1498 aa8.81□□□□□ -1
CTC1-209ENST00000581729 THOC2Q8NI27 1593 aaKnown RBP8.81□□□□□ -1
CTC1-209ENST00000581729 ATAD2BQ9ULI0 1458 aa8.77□□□□□ -1.01
CTC1-209ENST00000581729 SMARCA2P51531 1590 aa8.73□□□□□ -1.01
CTC1-209ENST00000581729 HMGXB3Q12766 1538 aa8.7□□□□□ -1.02
CTC1-209ENST00000581729 KIF21AQ7Z4S6 1674 aa8.68□□□□□ -1.02
CTC1-209ENST00000581729 SMARCA4P51532 1647 aa8.65□□□□□ -1.03
CTC1-209ENST00000581729 LAMC3Q9Y6N6 1575 aa8.63□□□□□ -1.03
CTC1-209ENST00000581729 BAZ1BQ9UIG0 1483 aaKnown RBP8.63□□□□□ -1.03
CTC1-209ENST00000581729 BAZ1AQ9NRL2 1556 aaPredicted RBP8.61□□□□□ -1.03
CTC1-209ENST00000581729 PDS5BQ9NTI5 1447 aa8.58□□□□□ -1.04
CTC1-209ENST00000581729 WDR62O43379 1518 aa8.58□□□□□ -1.04
CTC1-209ENST00000581729 MRC2Q9UBG0 1479 aa8.57□□□□□ -1.04
CTC1-209ENST00000581729 PEG3Q9GZU2 1588 aa8.55□□□□□ -1.04
CTC1-209ENST00000581729 OSCARQ8IYS5 282 aa8.54□□□□□ -1.04
CTC1-209ENST00000581729 RIMBP3CA6NJZ7 1639 aa8.54□□□□□ -1.04
CTC1-209ENST00000581729 RIMBP3BA6NNM3 1639 aa8.54□□□□□ -1.04
CTC1-209ENST00000581729 RIMBP3Q9UFD9 1639 aa8.54□□□□□ -1.04
CTC1-209ENST00000581729 CADPSQ9ULU8 1353 aa8.52□□□□□ -1.05
CTC1-209ENST00000581729 HOXD11P31277 338 aaPredicted RBP8.52□□□□□ -1.05
CTC1-209ENST00000581729 MROH2BQ7Z745 1585 aa8.52□□□□□ -1.05
CTC1-209ENST00000581729 ARHGEF11O15085 1522 aa8.48□□□□□ -1.05
CTC1-209ENST00000581729 CEP164Q9UPV0 1460 aa8.45□□□□□ -1.06
CTC1-209ENST00000581729 FANCD2Q9BXW9 1451 aa8.44□□□□□ -1.06
CTC1-209ENST00000581729 URB2Q14146 1524 aaKnown RBP8.44□□□□□ -1.06
CTC1-209ENST00000581729 ZNF608Q9ULD9 1512 aaPredicted RBP8.42□□□□□ -1.06
CTC1-209ENST00000581729 CYB5RLQ6IPT4 315 aa8.41□□□□□ -1.06
CTC1-209ENST00000581729 ARAP1Q96P48 1450 aa8.4□□□□□ -1.06
CTC1-209ENST00000581729 TRHP20396 242 aaPredicted RBP8.4□□□□□ -1.06
CTC1-209ENST00000581729 WIZO95785 1651 aa8.38□□□□□ -1.07
CTC1-209ENST00000581729 CFTRP13569 1480 aa8.36□□□□□ -1.07
CTC1-209ENST00000581729 EIF4G3O43432 1585 aaKnown RBP8.3□□□□□ -1.08
CTC1-209ENST00000581729 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.29□□□□□ -1.089e-7■□□□□ 8.9
CTC1-209ENST00000581729 RNF216Q9NWF9 866 aaPredicted RBP8.29□□□□□ -1.08
CTC1-209ENST00000581729 IFT140Q96RY7 1462 aa8.29□□□□□ -1.08
CTC1-209ENST00000581729 CHD1O14646 1710 aa8.29□□□□□ -1.08
CTC1-209ENST00000581729 AQRO60306 1485 aaKnown RBP eCLIP8.27□□□□□ -1.09
CTC1-209ENST00000581729 TOPBP1Q92547 1522 aa8.25□□□□□ -1.09
CTC1-209ENST00000581729 RSF1Q96T23 1441 aaPredicted RBP8.25□□□□□ -1.09
CTC1-209ENST00000581729 FBLN2P98095 1184 aa8.22□□□□□ -1.09
CTC1-209ENST00000581729 TOP2AP11388 1531 aaKnown RBP8.21□□□□□ -1.1
CTC1-209ENST00000581729 CLASP1Q7Z460 1538 aa8.21□□□□□ -1.1
CTC1-209ENST00000581729 SP7Q8TDD2 431 aaPredicted RBP8.21□□□□□ -1.1
CTC1-209ENST00000581729 TARBP1Q13395 1621 aaKnown RBP8.21□□□□□ -1.1
CTC1-209ENST00000581729 CAPN15O75808 1086 aa8.19□□□□□ -1.1
CTC1-209ENST00000581729 DSG3P32926 999 aa8.19□□□□□ -1.1
CTC1-209ENST00000581729 CNKSR2Q8WXI2 1034 aa8.18□□□□□ -1.1
CTC1-209ENST00000581729 ILDR1Q86SU0 546 aaPredicted RBP8.17□□□□□ -1.1
CTC1-209ENST00000581729 RAD54L2Q9Y4B4 1467 aa8.17□□□□□ -1.1
CTC1-209ENST00000581729 PRDM2Q13029 1718 aa8.17□□□□□ -1.1
CTC1-209ENST00000581729 POLA1P09884 1462 aaPredicted RBP8.16□□□□□ -1.1
CTC1-209ENST00000581729 SNAPC4Q5SXM2 1469 aa8.16□□□□□ -1.1
CTC1-209ENST00000581729 DNMBPQ6XZF7 1577 aa8.16□□□□□ -1.1
CTC1-209ENST00000581729 CCDC88BA6NC98 1476 aa8.15□□□□□ -1.1
CTC1-209ENST00000581729 TDRD9Q8NDG6 1382 aaKnown RBP8.15□□□□□ -1.1
CTC1-209ENST00000581729 ERCC6L2Q5T890 1561 aa8.13□□□□□ -1.11
CTC1-209ENST00000581729 GAPVD1Q14C86 1478 aa8.13□□□□□ -1.11
CTC1-209ENST00000581729 PPP4R3CPQ6ZMV5 832 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms