RNA–Protein interactions for RNA: ENST00000377031.7

C9orf85-203, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3 BASIC

Gene C9orf85, Length 1,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-203ENST00000377031 AEBP2Q6ZN18 517 aaPredicted RBP33.73■■■□□ 2.99
C9orf85-203ENST00000377031 CHIC1Q5VXU3 224 aa32.01■■■□□ 2.71
C9orf85-203ENST00000377031 SENP3Q9H4L4 574 aaPredicted RBP28.61■■■□□ 2.17
C9orf85-203ENST00000377031 PHF23Q9BUL5 403 aaPredicted RBP28.3■■■□□ 2.12
C9orf85-203ENST00000377031 FOXD1Q16676 465 aa26.75■■□□□ 1.87
C9orf85-203ENST00000377031 PLPPR3Q6T4P5 718 aa25.53■■□□□ 1.68
C9orf85-203ENST00000377031 PPP6R1Q9UPN7 881 aa25.11■■□□□ 1.61
C9orf85-203ENST00000377031 ADRA2BP18089 450 aa24.98■■□□□ 1.59
C9orf85-203ENST00000377031 PIAS4Q8N2W9 510 aaPredicted RBP24.92■■□□□ 1.58
C9orf85-203ENST00000377031 MSH5O43196 834 aa24.89■■□□□ 1.58
C9orf85-203ENST00000377031 NISCHQ9Y2I1 1504 aa24.79■■□□□ 1.56
C9orf85-203ENST00000377031 POTEDQ86YR6 584 aa24.29■■□□□ 1.48
C9orf85-203ENST00000377031 MAPK8IP2Q13387 824 aaPredicted RBP22.95■■□□□ 1.26
C9orf85-203ENST00000377031 DMRT2Q9Y5R5 561 aa22.75■■□□□ 1.23
C9orf85-203ENST00000377031 SCAF1Q9H7N4 1312 aaKnown RBP22.69■■□□□ 1.22
C9orf85-203ENST00000377031 PPP4R3CPQ6ZMV5 832 aa22.42■■□□□ 1.18
C9orf85-203ENST00000377031 CCDC180Q9P1Z9 1646 aa22.1■■□□□ 1.13
C9orf85-203ENST00000377031 HOXD11P31277 338 aaPredicted RBP21.96■■□□□ 1.11
C9orf85-203ENST00000377031 CNKSR2Q8WXI2 1034 aa21.95■■□□□ 1.1
C9orf85-203ENST00000377031 RNF216Q9NWF9 866 aaPredicted RBP21.76■■□□□ 1.07
C9orf85-203ENST00000377031 DCAF8L1A6NGE4 600 aa21.68■■□□□ 1.06
C9orf85-203ENST00000377031 ABCC9O60706 1549 aa21.47■■□□□ 1.03
C9orf85-203ENST00000377031 NCBP3Q53F19 620 aaKnown RBP21.47■■□□□ 1.03
C9orf85-203ENST00000377031 RNF39Q9H2S5 420 aa21.34■■□□□ 1.01
C9orf85-203ENST00000377031 CACNB1Q02641 598 aaPredicted RBP21.31■■□□□ 1
C9orf85-203ENST00000377031 NPM3O75607 178 aaKnown RBP21.3■■□□□ 1
C9orf85-203ENST00000377031 DNAJC5BQ9UF47 199 aa21.16■□□□□ 0.98
C9orf85-203ENST00000377031 KCNA4P22459 653 aa20.96■□□□□ 0.95
C9orf85-203ENST00000377031 C1QBPQ07021 282 aaKnown RBP20.96■□□□□ 0.95
C9orf85-203ENST00000377031 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.8■□□□□ 0.922e-6■□□□□ 8.5
C9orf85-203ENST00000377031 NACADO15069 1562 aa20.77■□□□□ 0.92
C9orf85-203ENST00000377031 RB1CC1Q8TDY2 1594 aa20.76■□□□□ 0.91
C9orf85-203ENST00000377031 MYO15BQ96JP2 1530 aa20.73■□□□□ 0.91
C9orf85-203ENST00000377031 ZCCHC6Q5VYS8 1495 aaKnown RBP20.66■□□□□ 0.9
C9orf85-203ENST00000377031 DCAF1Q9Y4B6 1507 aa20.61■□□□□ 0.89
C9orf85-203ENST00000377031 U3KPZ7 1027 aaPredicted RBP20.5■□□□□ 0.87
C9orf85-203ENST00000377031 DCAF8L2P0C7V8 631 aa20.48■□□□□ 0.87
C9orf85-203ENST00000377031 SLC4A2P04920 1241 aa20.39■□□□□ 0.85
C9orf85-203ENST00000377031 UNC13AQ9UPW8 1703 aa20.28■□□□□ 0.84
C9orf85-203ENST00000377031 SPINK5Q9NQ38 1064 aaPredicted RBP20.18■□□□□ 0.82
C9orf85-203ENST00000377031 BICRAQ9NZM4 1560 aa20.14■□□□□ 0.81
C9orf85-203ENST00000377031 SHROOM4Q9ULL8 1493 aa20.05■□□□□ 0.8
C9orf85-203ENST00000377031 CAPN15O75808 1086 aa20.03■□□□□ 0.8
C9orf85-203ENST00000377031 PABPN1Q86U42 306 aaKnown RBP eCLIP20.01■□□□□ 0.79
C9orf85-203ENST00000377031 DSG3P32926 999 aa20■□□□□ 0.79
C9orf85-203ENST00000377031 SCRIBQ14160 1630 aa20■□□□□ 0.79
C9orf85-203ENST00000377031 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.77■□□□□ 0.76
C9orf85-203ENST00000377031 HNRNPUL2Q1KMD3 747 aaKnown RBP19.77■□□□□ 0.76
C9orf85-203ENST00000377031 TRHP20396 242 aaPredicted RBP19.73■□□□□ 0.75
C9orf85-203ENST00000377031 SLC4A1APQ9BWU0 796 aaKnown RBP19.72■□□□□ 0.75
C9orf85-203ENST00000377031 APLP2Q06481 763 aa19.71■□□□□ 0.75
C9orf85-203ENST00000377031 SAMD1Q6SPF0 538 aaPredicted RBP19.7■□□□□ 0.74
C9orf85-203ENST00000377031 ZNF219Q9P2Y4 722 aaPredicted RBP19.68■□□□□ 0.74
C9orf85-203ENST00000377031 ABCB7O75027 752 aa19.62■□□□□ 0.73
C9orf85-203ENST00000377031 MYCNP04198 464 aaPredicted RBP19.62■□□□□ 0.73
C9orf85-203ENST00000377031 EIF4G1Q04637 1599 aaKnown RBP19.59■□□□□ 0.73
C9orf85-203ENST00000377031 FOXD4L1Q9NU39 408 aa19.49■□□□□ 0.71
C9orf85-203ENST00000377031 CC2D2AQ9P2K1 1620 aa19.49■□□□□ 0.71
C9orf85-203ENST00000377031 ZBTB22O15209 634 aa19.35■□□□□ 0.69
C9orf85-203ENST00000377031 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
C9orf85-203ENST00000377031 ATF5Q9Y2D1 282 aaPredicted RBP19.3■□□□□ 0.68
C9orf85-203ENST00000377031 POLA2Q14181 598 aa19.25■□□□□ 0.67
C9orf85-203ENST00000377031 SMARCA4P51532 1647 aa19.22■□□□□ 0.67
C9orf85-203ENST00000377031 BAZ1AQ9NRL2 1556 aaPredicted RBP19.22■□□□□ 0.67
C9orf85-203ENST00000377031 NCAPD3P42695 1498 aa19.17■□□□□ 0.66
C9orf85-203ENST00000377031 ATAD2BQ9ULI0 1458 aa19.13■□□□□ 0.65
C9orf85-203ENST00000377031 PEG3Q9GZU2 1588 aa19.13■□□□□ 0.65
C9orf85-203ENST00000377031 SMARCA2P51531 1590 aa19.12■□□□□ 0.65
C9orf85-203ENST00000377031 HMGXB3Q12766 1538 aa19.07■□□□□ 0.64
C9orf85-203ENST00000377031 MROH2BQ7Z745 1585 aa19.06■□□□□ 0.64
C9orf85-203ENST00000377031 POTEHQ6S545 545 aa19■□□□□ 0.63
C9orf85-203ENST00000377031 RBM42Q9BTD8 480 aaKnown RBP18.95■□□□□ 0.62
C9orf85-203ENST00000377031 BAZ1BQ9UIG0 1483 aaKnown RBP18.93■□□□□ 0.62
C9orf85-203ENST00000377031 ATXN8OSP0DMR3 200 aa18.86■□□□□ 0.61
C9orf85-203ENST00000377031 RSF1Q96T23 1441 aaPredicted RBP18.85■□□□□ 0.61
C9orf85-203ENST00000377031 WIZO95785 1651 aa18.83■□□□□ 0.61
C9orf85-203ENST00000377031 ZBTB12Q9Y330 459 aaPredicted RBP18.77■□□□□ 0.6
C9orf85-203ENST00000377031 TOP2AP11388 1531 aaKnown RBP18.69■□□□□ 0.58
C9orf85-203ENST00000377031 OSCARQ8IYS5 282 aa18.67■□□□□ 0.58
C9orf85-203ENST00000377031 LAMC3Q9Y6N6 1575 aa18.65■□□□□ 0.58
C9orf85-203ENST00000377031 CHRDL2Q6WN34 429 aa18.59■□□□□ 0.57
C9orf85-203ENST00000377031 AKT1S1Q96B36 256 aa18.59■□□□□ 0.57
C9orf85-203ENST00000377031 NESP48681 1621 aa18.59■□□□□ 0.57
C9orf85-203ENST00000377031 CADPSQ9ULU8 1353 aa18.56■□□□□ 0.56
C9orf85-203ENST00000377031 ERCC6Q03468 1493 aa18.51■□□□□ 0.55
C9orf85-203ENST00000377031 PDS5BQ9NTI5 1447 aa18.49■□□□□ 0.55
C9orf85-203ENST00000377031 CFTRP13569 1480 aa18.48■□□□□ 0.55
C9orf85-203ENST00000377031 CSRNP3Q8WYN3 585 aa18.47■□□□□ 0.55
C9orf85-203ENST00000377031 REM2Q8IYK8 340 aaPredicted RBP18.45■□□□□ 0.54
C9orf85-203ENST00000377031 CUX2O14529 1486 aa18.45■□□□□ 0.54
C9orf85-203ENST00000377031 CCDC88BA6NC98 1476 aa18.44■□□□□ 0.54
C9orf85-203ENST00000377031 MKRN4PQ13434 485 aaPredicted RBP18.42■□□□□ 0.54
C9orf85-203ENST00000377031 KIF21AQ7Z4S6 1674 aa18.41■□□□□ 0.54
C9orf85-203ENST00000377031 THOC2Q8NI27 1593 aaKnown RBP18.39■□□□□ 0.53
C9orf85-203ENST00000377031 PRDM2Q13029 1718 aa18.35■□□□□ 0.53
C9orf85-203ENST00000377031 FBLN2P98095 1184 aa18.34■□□□□ 0.53
C9orf85-203ENST00000377031 FANCD2Q9BXW9 1451 aa18.32■□□□□ 0.52
C9orf85-203ENST00000377031 CEP164Q9UPV0 1460 aa18.3■□□□□ 0.52
C9orf85-203ENST00000377031 MRC2Q9UBG0 1479 aa18.29■□□□□ 0.52
C9orf85-203ENST00000377031 SPDYE2BA6NHP3 402 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms