RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 NISCHQ9Y2I1 1504 aa36.89■■■■□ 3.5
DDB1-218ENST00000540784 CCDC180Q9P1Z9 1646 aa32.55■■■□□ 2.8
DDB1-218ENST00000540784 ABCC9O60706 1549 aa31.74■■■□□ 2.67
DDB1-218ENST00000540784 DCAF8L2P0C7V8 631 aa30.95■■■□□ 2.55
DDB1-218ENST00000540784 ZCCHC6Q5VYS8 1495 aaKnown RBP30.73■■■□□ 2.51
DDB1-218ENST00000540784 NACADO15069 1562 aa30.63■■■□□ 2.49
DDB1-218ENST00000540784 RB1CC1Q8TDY2 1594 aa30.6■■■□□ 2.49
DDB1-218ENST00000540784 MYO15BQ96JP2 1530 aa30.52■■■□□ 2.48
DDB1-218ENST00000540784 DCAF1Q9Y4B6 1507 aa30.49■■■□□ 2.47
DDB1-218ENST00000540784 PABPN1Q86U42 306 aaKnown RBP eCLIP29.81■■■□□ 2.36
DDB1-218ENST00000540784 SCRIBQ14160 1630 aa29.79■■■□□ 2.36
DDB1-218ENST00000540784 UNC13AQ9UPW8 1703 aa29.78■■■□□ 2.36
DDB1-218ENST00000540784 BICRAQ9NZM4 1560 aa29.62■■■□□ 2.33
DDB1-218ENST00000540784 SHROOM4Q9ULL8 1493 aa29.4■■■□□ 2.3
DDB1-218ENST00000540784 DNAJC5BQ9UF47 199 aa28.96■■■□□ 2.23
DDB1-218ENST00000540784 EIF4G1Q04637 1599 aaKnown RBP28.84■■■□□ 2.21
DDB1-218ENST00000540784 CECR2Q9BXF3 1484 aa28.72■■■□□ 2.19
DDB1-218ENST00000540784 CC2D2AQ9P2K1 1620 aa28.66■■■□□ 2.18
DDB1-218ENST00000540784 BAZ1AQ9NRL2 1556 aaPredicted RBP28.55■■■□□ 2.16
DDB1-218ENST00000540784 SMARCA4P51532 1647 aa28.51■■■□□ 2.15
DDB1-218ENST00000540784 MROH2BQ7Z745 1585 aa28.43■■■□□ 2.14
DDB1-218ENST00000540784 ATAD2BQ9ULI0 1458 aa28.35■■■□□ 2.13
DDB1-218ENST00000540784 NCAPD3P42695 1498 aa28.31■■■□□ 2.12
DDB1-218ENST00000540784 SMARCA2P51531 1590 aa28.3■■■□□ 2.12
DDB1-218ENST00000540784 RSF1Q96T23 1441 aaPredicted RBP28.25■■■□□ 2.11
DDB1-218ENST00000540784 PEG3Q9GZU2 1588 aa28.2■■■□□ 2.11
DDB1-218ENST00000540784 BAZ1BQ9UIG0 1483 aaKnown RBP28.13■■■□□ 2.09
DDB1-218ENST00000540784 WIZO95785 1651 aa28.1■■■□□ 2.09
DDB1-218ENST00000540784 HMGXB3Q12766 1538 aa28.1■■■□□ 2.09
DDB1-218ENST00000540784 SUPT5HO00267 1087 aaKnown RBP27.88■■■□□ 2.05
DDB1-218ENST00000540784 TOP2AP11388 1531 aaKnown RBP27.82■■■□□ 2.04
DDB1-218ENST00000540784 CCDC88BA6NC98 1476 aa27.57■■■□□ 2
DDB1-218ENST00000540784 CADPSQ9ULU8 1353 aa27.54■■■□□ 2
DDB1-218ENST00000540784 NESP48681 1621 aa27.52■■■□□ 2
DDB1-218ENST00000540784 LAMC3Q9Y6N6 1575 aa27.46■■□□□ 1.99
DDB1-218ENST00000540784 CFTRP13569 1480 aa27.38■■□□□ 1.97
DDB1-218ENST00000540784 PDS5BQ9NTI5 1447 aa27.36■■□□□ 1.97
DDB1-218ENST00000540784 ERCC6Q03468 1493 aa27.35■■□□□ 1.97
DDB1-218ENST00000540784 FANCD2Q9BXW9 1451 aa27.18■■□□□ 1.94
DDB1-218ENST00000540784 KIF21AQ7Z4S6 1674 aa27.11■■□□□ 1.93
DDB1-218ENST00000540784 CEP164Q9UPV0 1460 aa27.1■■□□□ 1.93
DDB1-218ENST00000540784 PRDM2Q13029 1718 aa27.02■■□□□ 1.92
DDB1-218ENST00000540784 MRC2Q9UBG0 1479 aa27■■□□□ 1.91
DDB1-218ENST00000540784 THOC2Q8NI27 1593 aaKnown RBP26.94■■□□□ 1.9
DDB1-218ENST00000540784 CUX2O14529 1486 aa26.91■■□□□ 1.9
DDB1-218ENST00000540784 WDR62O43379 1518 aa26.85■■□□□ 1.89
DDB1-218ENST00000540784 URB2Q14146 1524 aaKnown RBP26.85■■□□□ 1.89
DDB1-218ENST00000540784 ABCC8Q09428 1581 aa26.81■■□□□ 1.88
DDB1-218ENST00000540784 TOPBP1Q92547 1522 aa26.75■■□□□ 1.87
DDB1-218ENST00000540784 DNMBPQ6XZF7 1577 aa26.71■■□□□ 1.87
DDB1-218ENST00000540784 CUX1P39880 1505 aa26.64■■□□□ 1.85
DDB1-218ENST00000540784 WRNQ14191 1432 aaPredicted RBP eCLIP26.63■■□□□ 1.85
DDB1-218ENST00000540784 POLA1P09884 1462 aaPredicted RBP26.54■■□□□ 1.84
DDB1-218ENST00000540784 IFT140Q96RY7 1462 aa26.54■■□□□ 1.84
DDB1-218ENST00000540784 SOGA1O94964 1423 aa26.53■■□□□ 1.84
DDB1-218ENST00000540784 FGD5Q6ZNL6 1462 aa26.52■■□□□ 1.84
DDB1-218ENST00000540784 RAD54L2Q9Y4B4 1467 aa26.47■■□□□ 1.83
DDB1-218ENST00000540784 TOP2BQ02880 1626 aa26.47■■□□□ 1.83
DDB1-218ENST00000540784 SYNJ1O43426 1573 aa26.46■■□□□ 1.83
DDB1-218ENST00000540784 BIVM-ERCC5R4GMW8 1640 aa26.42■■□□□ 1.82
DDB1-218ENST00000540784 TARBP1Q13395 1621 aaKnown RBP26.39■■□□□ 1.81
DDB1-218ENST00000540784 ZNF608Q9ULD9 1512 aaPredicted RBP26.38■■□□□ 1.81
DDB1-218ENST00000540784 TDRD9Q8NDG6 1382 aaKnown RBP26.34■■□□□ 1.81
DDB1-218ENST00000540784 TRIM41Q8WV44 630 aa26.33■■□□□ 1.81
DDB1-218ENST00000540784 AQRO60306 1485 aaKnown RBP eCLIP26.32■■□□□ 1.81e-8■■■■□ 26.3
DDB1-218ENST00000540784 ABCA10Q8WWZ4 1543 aa26.27■■□□□ 1.8
DDB1-218ENST00000540784 EIF4G3O43432 1585 aaKnown RBP26.2■■□□□ 1.79
DDB1-218ENST00000540784 GAPVD1Q14C86 1478 aa26.18■■□□□ 1.78
DDB1-218ENST00000540784 WDR97A6NE52 1622 aa26.18■■□□□ 1.78
DDB1-218ENST00000540784 CHIC1Q5VXU3 224 aa26.15■■□□□ 1.78
DDB1-218ENST00000540784 GRIN2BQ13224 1484 aa26.13■■□□□ 1.77
DDB1-218ENST00000540784 ABCA5Q8WWZ7 1642 aa26.07■■□□□ 1.76
DDB1-218ENST00000540784 KIF27Q86VH2 1401 aa26.07■■□□□ 1.76
DDB1-218ENST00000540784 FBLN2P98095 1184 aa26.07■■□□□ 1.76
DDB1-218ENST00000540784 SNAPC4Q5SXM2 1469 aa26.03■■□□□ 1.76
DDB1-218ENST00000540784 CHMP7Q8WUX9 453 aaPredicted RBP26.02■■□□□ 1.76
DDB1-218ENST00000540784 OSCARQ8IYS5 282 aa26.01■■□□□ 1.75
DDB1-218ENST00000540784 MAGI1Q96QZ7 1491 aaPredicted RBP26■■□□□ 1.75
DDB1-218ENST00000540784 PBRM1Q86U86 1689 aa25.96■■□□□ 1.75
DDB1-218ENST00000540784 IGF1RP08069 1367 aa25.96■■□□□ 1.75
DDB1-218ENST00000540784 ERICH3Q5RHP9 1530 aa25.95■■□□□ 1.74
DDB1-218ENST00000540784 SYNJ2O15056 1496 aa25.91■■□□□ 1.74
DDB1-218ENST00000540784 RUSC2Q8N2Y8 1516 aa25.9■■□□□ 1.74
DDB1-218ENST00000540784 DNAJC5Q9H3Z4 198 aa25.9■■□□□ 1.74
DDB1-218ENST00000540784 FHAD1B1AJZ9 1412 aa25.89■■□□□ 1.74
DDB1-218ENST00000540784 CARMIL1Q5VZK9 1371 aa25.82■■□□□ 1.72
DDB1-218ENST00000540784 CHD1O14646 1710 aa25.81■■□□□ 1.72
DDB1-218ENST00000540784 ADAMTS12P58397 1594 aa25.81■■□□□ 1.72
DDB1-218ENST00000540784 FAM9AQ8IZU1 332 aaPredicted RBP25.78■■□□□ 1.72
DDB1-218ENST00000540784 CSRNP3Q8WYN3 585 aa25.78■■□□□ 1.72
DDB1-218ENST00000540784 GRIN2AQ12879 1464 aa25.77■■□□□ 1.72
DDB1-218ENST00000540784 EEA1Q15075 1411 aa25.74■■□□□ 1.71
DDB1-218ENST00000540784 CUL7Q14999 1698 aa25.73■■□□□ 1.71
DDB1-218ENST00000540784 RAPGEF2Q9Y4G8 1499 aa25.65■■□□□ 1.7
DDB1-218ENST00000540784 NUP160Q12769 1436 aa25.63■■□□□ 1.69
DDB1-218ENST00000540784 PRXQ9BXM0 1461 aa25.6■■□□□ 1.69
DDB1-218ENST00000540784 CEP170Q5SW79 1584 aa25.58■■□□□ 1.69
DDB1-218ENST00000540784 CLASP1Q7Z460 1538 aa25.57■■□□□ 1.68
DDB1-218ENST00000540784 JPH4Q96JJ6 628 aa25.53■■□□□ 1.68
DDB1-218ENST00000540784 KIAA0586Q9BVV6 1533 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms