RNA–Protein interactions for RNA: ENST00000352103.6

STAG3L4-201, Transcript of stromal antigen 3-like 4 (pseudogene), humanhuman

BASIC

Gene STAG3L4, Length 530 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3L4-201ENST00000352103 NISCHQ9Y2I1 1504 aa16.33■□□□□ 0.2
STAG3L4-201ENST00000352103 ABCC9O60706 1549 aa15.27■□□□□ 0.03
STAG3L4-201ENST00000352103 CCDC180Q9P1Z9 1646 aa14.84□□□□□ -0.03
STAG3L4-201ENST00000352103 DNAJC5BQ9UF47 199 aa14.83□□□□□ -0.04
STAG3L4-201ENST00000352103 RB1CC1Q8TDY2 1594 aa14.34□□□□□ -0.11
STAG3L4-201ENST00000352103 NACADO15069 1562 aa14.16□□□□□ -0.14
STAG3L4-201ENST00000352103 PABPN1Q86U42 306 aaKnown RBP eCLIP14.15□□□□□ -0.14
STAG3L4-201ENST00000352103 UNC13AQ9UPW8 1703 aa14.04□□□□□ -0.16
STAG3L4-201ENST00000352103 BICRAQ9NZM4 1560 aa13.99□□□□□ -0.17
STAG3L4-201ENST00000352103 DNAJC5Q9H3Z4 198 aa13.96□□□□□ -0.17
STAG3L4-201ENST00000352103 DCAF8L2P0C7V8 631 aa13.9□□□□□ -0.18
STAG3L4-201ENST00000352103 MYO15BQ96JP2 1530 aa13.85□□□□□ -0.19
STAG3L4-201ENST00000352103 CECR2Q9BXF3 1484 aa13.82□□□□□ -0.2
STAG3L4-201ENST00000352103 CC2D2AQ9P2K1 1620 aa13.79□□□□□ -0.2
STAG3L4-201ENST00000352103 SHROOM4Q9ULL8 1493 aa13.74□□□□□ -0.21
STAG3L4-201ENST00000352103 EIF4G1Q04637 1599 aaKnown RBP13.65□□□□□ -0.22
STAG3L4-201ENST00000352103 DCAF1Q9Y4B6 1507 aa13.49□□□□□ -0.25
STAG3L4-201ENST00000352103 SCRIBQ14160 1630 aa13.44□□□□□ -0.26
STAG3L4-201ENST00000352103 ZCCHC6Q5VYS8 1495 aaKnown RBP13.42□□□□□ -0.26
STAG3L4-201ENST00000352103 CUX2O14529 1486 aa13.39□□□□□ -0.27
STAG3L4-201ENST00000352103 ERCC6Q03468 1493 aa13.18□□□□□ -0.3
STAG3L4-201ENST00000352103 NCAPD3P42695 1498 aa13.1□□□□□ -0.31
STAG3L4-201ENST00000352103 TRIM41Q8WV44 630 aa13.05□□□□□ -0.32
STAG3L4-201ENST00000352103 NESP48681 1621 aa13□□□□□ -0.33
STAG3L4-201ENST00000352103 ATAD2BQ9ULI0 1458 aa12.97□□□□□ -0.33
STAG3L4-201ENST00000352103 THOC2Q8NI27 1593 aaKnown RBP12.97□□□□□ -0.33
STAG3L4-201ENST00000352103 HMGXB3Q12766 1538 aa12.93□□□□□ -0.34
STAG3L4-201ENST00000352103 SMARCA2P51531 1590 aa12.89□□□□□ -0.35
STAG3L4-201ENST00000352103 LAMC3Q9Y6N6 1575 aa12.85□□□□□ -0.35
STAG3L4-201ENST00000352103 SMARCA4P51532 1647 aa12.81□□□□□ -0.36
STAG3L4-201ENST00000352103 KIF21AQ7Z4S6 1674 aa12.8□□□□□ -0.36
STAG3L4-201ENST00000352103 PDS5BQ9NTI5 1447 aa12.79□□□□□ -0.36
STAG3L4-201ENST00000352103 BAZ1BQ9UIG0 1483 aaKnown RBP12.78□□□□□ -0.36
STAG3L4-201ENST00000352103 PEG3Q9GZU2 1588 aa12.74□□□□□ -0.37
STAG3L4-201ENST00000352103 OSCARQ8IYS5 282 aa12.7□□□□□ -0.38
STAG3L4-201ENST00000352103 BAZ1AQ9NRL2 1556 aaPredicted RBP12.69□□□□□ -0.38
STAG3L4-201ENST00000352103 WDR62O43379 1518 aa12.69□□□□□ -0.38
STAG3L4-201ENST00000352103 MRC2Q9UBG0 1479 aa12.69□□□□□ -0.38
STAG3L4-201ENST00000352103 CADPSQ9ULU8 1353 aa12.67□□□□□ -0.38
STAG3L4-201ENST00000352103 MROH2BQ7Z745 1585 aa12.56□□□□□ -0.4
STAG3L4-201ENST00000352103 RIMBP3CA6NJZ7 1639 aa12.56□□□□□ -0.4
STAG3L4-201ENST00000352103 RIMBP3BA6NNM3 1639 aa12.56□□□□□ -0.4
STAG3L4-201ENST00000352103 RIMBP3Q9UFD9 1639 aa12.56□□□□□ -0.4
STAG3L4-201ENST00000352103 CEP164Q9UPV0 1460 aa12.53□□□□□ -0.4
STAG3L4-201ENST00000352103 FANCD2Q9BXW9 1451 aa12.49□□□□□ -0.41
STAG3L4-201ENST00000352103 ARHGEF11O15085 1522 aa12.48□□□□□ -0.41
STAG3L4-201ENST00000352103 URB2Q14146 1524 aaKnown RBP12.43□□□□□ -0.42
STAG3L4-201ENST00000352103 CFTRP13569 1480 aa12.43□□□□□ -0.42
STAG3L4-201ENST00000352103 CYB5RLQ6IPT4 315 aa12.41□□□□□ -0.42
STAG3L4-201ENST00000352103 TRHP20396 242 aaPredicted RBP12.38□□□□□ -0.43
STAG3L4-201ENST00000352103 WIZO95785 1651 aa12.38□□□□□ -0.43
STAG3L4-201ENST00000352103 AEBP2Q6ZN18 517 aaPredicted RBP12.36□□□□□ -0.43
STAG3L4-201ENST00000352103 ZNF608Q9ULD9 1512 aaPredicted RBP12.35□□□□□ -0.43
STAG3L4-201ENST00000352103 ARAP1Q96P48 1450 aa12.34□□□□□ -0.43
STAG3L4-201ENST00000352103 IFT140Q96RY7 1462 aa12.32□□□□□ -0.44
STAG3L4-201ENST00000352103 RSF1Q96T23 1441 aaPredicted RBP12.27□□□□□ -0.45
STAG3L4-201ENST00000352103 CHD1O14646 1710 aa12.23□□□□□ -0.45
STAG3L4-201ENST00000352103 EIF4G3O43432 1585 aaKnown RBP12.23□□□□□ -0.45
STAG3L4-201ENST00000352103 PRDM2Q13029 1718 aa12.23□□□□□ -0.45
STAG3L4-201ENST00000352103 TOPBP1Q92547 1522 aa12.21□□□□□ -0.46
STAG3L4-201ENST00000352103 TOP2AP11388 1531 aaKnown RBP12.18□□□□□ -0.46
STAG3L4-201ENST00000352103 AQRO60306 1485 aaKnown RBP eCLIP12.18□□□□□ -0.461e-6■■□□□ 12.5
STAG3L4-201ENST00000352103 ABCC8Q09428 1581 aa12.16□□□□□ -0.46
STAG3L4-201ENST00000352103 TARBP1Q13395 1621 aaKnown RBP12.15□□□□□ -0.47
STAG3L4-201ENST00000352103 FBLN2P98095 1184 aa12.13□□□□□ -0.47
STAG3L4-201ENST00000352103 CLASP1Q7Z460 1538 aa12.11□□□□□ -0.47
STAG3L4-201ENST00000352103 DNMBPQ6XZF7 1577 aa12.11□□□□□ -0.47
STAG3L4-201ENST00000352103 CCDC88BA6NC98 1476 aa12.07□□□□□ -0.48
STAG3L4-201ENST00000352103 POLA1P09884 1462 aaPredicted RBP12.06□□□□□ -0.48
STAG3L4-201ENST00000352103 SYNJ1O43426 1573 aa12.03□□□□□ -0.48
STAG3L4-201ENST00000352103 TDRD9Q8NDG6 1382 aaKnown RBP12.02□□□□□ -0.49
STAG3L4-201ENST00000352103 SNAPC4Q5SXM2 1469 aa12.02□□□□□ -0.49
STAG3L4-201ENST00000352103 RAD54L2Q9Y4B4 1467 aa12.02□□□□□ -0.49
STAG3L4-201ENST00000352103 CHMP7Q8WUX9 453 aaPredicted RBP12.01□□□□□ -0.49
STAG3L4-201ENST00000352103 GAPVD1Q14C86 1478 aa12□□□□□ -0.49
STAG3L4-201ENST00000352103 SOGA1O94964 1423 aa11.99□□□□□ -0.49
STAG3L4-201ENST00000352103 MAGI1Q96QZ7 1491 aaPredicted RBP11.99□□□□□ -0.49
STAG3L4-201ENST00000352103 WDR97A6NE52 1622 aa11.99□□□□□ -0.49
STAG3L4-201ENST00000352103 SYNJ2O15056 1496 aa11.95□□□□□ -0.5
STAG3L4-201ENST00000352103 ILDR1Q86SU0 546 aaPredicted RBP11.95□□□□□ -0.5
STAG3L4-201ENST00000352103 GRIN2BQ13224 1484 aa11.94□□□□□ -0.5
STAG3L4-201ENST00000352103 FGD5Q6ZNL6 1462 aa11.89□□□□□ -0.51
STAG3L4-201ENST00000352103 KIF13AQ9H1H9 1805 aa11.89□□□□□ -0.51
STAG3L4-201ENST00000352103 ERCC6L2Q5T890 1561 aa11.88□□□□□ -0.51
STAG3L4-201ENST00000352103 KDM4FA0A1W2PPD8 638 aa11.86□□□□□ -0.51
STAG3L4-201ENST00000352103 CUX1P39880 1505 aa11.83□□□□□ -0.52
STAG3L4-201ENST00000352103 PBRM1Q86U86 1689 aa11.83□□□□□ -0.52
STAG3L4-201ENST00000352103 CEP170Q5SW79 1584 aa11.81□□□□□ -0.52
STAG3L4-201ENST00000352103 NUP160Q12769 1436 aa11.79□□□□□ -0.52
STAG3L4-201ENST00000352103 SHROOM2Q13796 1616 aa11.78□□□□□ -0.52
STAG3L4-201ENST00000352103 GRIN2AQ12879 1464 aa11.78□□□□□ -0.52
STAG3L4-201ENST00000352103 ABCA5Q8WWZ7 1642 aa11.77□□□□□ -0.53
STAG3L4-201ENST00000352103 ABCC10Q5T3U5 1492 aa11.76□□□□□ -0.53
STAG3L4-201ENST00000352103 ABCA10Q8WWZ4 1543 aa11.76□□□□□ -0.53
STAG3L4-201ENST00000352103 FAM69CQ0P6D2 419 aa11.75□□□□□ -0.53
STAG3L4-201ENST00000352103 MAPKBP1O60336 1514 aa11.7□□□□□ -0.54
STAG3L4-201ENST00000352103 ADAMTS12P58397 1594 aa11.7□□□□□ -0.54
STAG3L4-201ENST00000352103 DIP2BQ9P265 1576 aa11.7□□□□□ -0.54
STAG3L4-201ENST00000352103 KDM6BO15054 1643 aa11.69□□□□□ -0.54
STAG3L4-201ENST00000352103 PRG4Q92954 1404 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms