RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 NISCHQ9Y2I1 1504 aa33.21■■■□□ 2.91
CGGBP1-201ENST00000309534 CCDC180Q9P1Z9 1646 aa28.72■■■□□ 2.19
CGGBP1-201ENST00000309534 DCAF8L2P0C7V8 631 aa28.44■■■□□ 2.14
CGGBP1-201ENST00000309534 ZCCHC6Q5VYS8 1495 aaKnown RBP27.85■■■□□ 2.05
CGGBP1-201ENST00000309534 SHROOM4Q9ULL8 1493 aa27.78■■■□□ 2.04
CGGBP1-201ENST00000309534 ABCC9O60706 1549 aa27.37■■□□□ 1.97
CGGBP1-201ENST00000309534 DCAF1Q9Y4B6 1507 aa27.37■■□□□ 1.97
CGGBP1-201ENST00000309534 SUPT5HO00267 1087 aaKnown RBP27.14■■□□□ 1.94
CGGBP1-201ENST00000309534 MYO15BQ96JP2 1530 aa26.96■■□□□ 1.91
CGGBP1-201ENST00000309534 NACADO15069 1562 aa26.95■■□□□ 1.9
CGGBP1-201ENST00000309534 RB1CC1Q8TDY2 1594 aa26.76■■□□□ 1.88
CGGBP1-201ENST00000309534 SCRIBQ14160 1630 aa26.66■■□□□ 1.86
CGGBP1-201ENST00000309534 PABPN1Q86U42 306 aaKnown RBP eCLIP26.02■■□□□ 1.76
CGGBP1-201ENST00000309534 RSF1Q96T23 1441 aaPredicted RBP25.9■■□□□ 1.74
CGGBP1-201ENST00000309534 BAZ1AQ9NRL2 1556 aaPredicted RBP25.8■■□□□ 1.72
CGGBP1-201ENST00000309534 CHIC1Q5VXU3 224 aa25.7■■□□□ 1.7
CGGBP1-201ENST00000309534 CECR2Q9BXF3 1484 aa25.7■■□□□ 1.7
CGGBP1-201ENST00000309534 MROH2BQ7Z745 1585 aa25.57■■□□□ 1.68
CGGBP1-201ENST00000309534 TRIM41Q8WV44 630 aa25.57■■□□□ 1.68
CGGBP1-201ENST00000309534 SMARCA4P51532 1647 aa25.42■■□□□ 1.66
CGGBP1-201ENST00000309534 UNC13AQ9UPW8 1703 aa25.41■■□□□ 1.66
CGGBP1-201ENST00000309534 BICRAQ9NZM4 1560 aa25.33■■□□□ 1.65
CGGBP1-201ENST00000309534 WIZO95785 1651 aa25.31■■□□□ 1.64
CGGBP1-201ENST00000309534 TOP2AP11388 1531 aaKnown RBP25.26■■□□□ 1.63
CGGBP1-201ENST00000309534 SMARCA2P51531 1590 aa25.25■■□□□ 1.63
CGGBP1-201ENST00000309534 BAZ1BQ9UIG0 1483 aaKnown RBP25.22■■□□□ 1.63
CGGBP1-201ENST00000309534 FAM9AQ8IZU1 332 aaPredicted RBP25.11■■□□□ 1.61
CGGBP1-201ENST00000309534 ATAD2BQ9ULI0 1458 aa25.07■■□□□ 1.6
CGGBP1-201ENST00000309534 CCDC88BA6NC98 1476 aa25.02■■□□□ 1.6
CGGBP1-201ENST00000309534 EIF4G1Q04637 1599 aaKnown RBP24.91■■□□□ 1.58
CGGBP1-201ENST00000309534 PEG3Q9GZU2 1588 aa24.9■■□□□ 1.58
CGGBP1-201ENST00000309534 NCAPD3P42695 1498 aa24.82■■□□□ 1.56
CGGBP1-201ENST00000309534 EHMT2Q96KQ7 1210 aa24.81■■□□□ 1.56
CGGBP1-201ENST00000309534 LOC105371045A0A1W2PR82 267 aa24.75■■□□□ 1.55
CGGBP1-201ENST00000309534 HMGXB3Q12766 1538 aa24.74■■□□□ 1.55
CGGBP1-201ENST00000309534 WRNQ14191 1432 aaPredicted RBP eCLIP24.68■■□□□ 1.54
CGGBP1-201ENST00000309534 EEA1Q15075 1411 aa24.62■■□□□ 1.53
CGGBP1-201ENST00000309534 UBTFP17480 764 aaKnown RBP24.62■■□□□ 1.53
CGGBP1-201ENST00000309534 CSRNP3Q8WYN3 585 aa24.53■■□□□ 1.52
CGGBP1-201ENST00000309534 ABCC8Q09428 1581 aa24.5■■□□□ 1.51
CGGBP1-201ENST00000309534 CC2D2AQ9P2K1 1620 aa24.47■■□□□ 1.51
CGGBP1-201ENST00000309534 CADPSQ9ULU8 1353 aa24.42■■□□□ 1.5
CGGBP1-201ENST00000309534 APLP2Q06481 763 aa24.39■■□□□ 1.5
CGGBP1-201ENST00000309534 CFTRP13569 1480 aa24.31■■□□□ 1.48
CGGBP1-201ENST00000309534 PCGF6Q9BYE7 350 aa24.25■■□□□ 1.47
CGGBP1-201ENST00000309534 GOLGA3Q08378 1498 aa24.22■■□□□ 1.47
CGGBP1-201ENST00000309534 TRIM26Q12899 539 aaPredicted RBP24.2■■□□□ 1.46
CGGBP1-201ENST00000309534 SOGA1O94964 1423 aa24.2■■□□□ 1.46
CGGBP1-201ENST00000309534 KIF27Q86VH2 1401 aa24.2■■□□□ 1.46
CGGBP1-201ENST00000309534 CEP164Q9UPV0 1460 aa24.19■■□□□ 1.46
CGGBP1-201ENST00000309534 PDS5BQ9NTI5 1447 aa24.18■■□□□ 1.46
CGGBP1-201ENST00000309534 RANGAP1P46060 587 aaPredicted RBP24.13■■□□□ 1.45
CGGBP1-201ENST00000309534 TNIKQ9UKE5 1360 aa24.13■■□□□ 1.45
CGGBP1-201ENST00000309534 FANCD2Q9BXW9 1451 aa24.11■■□□□ 1.45
CGGBP1-201ENST00000309534 SYNJ1O43426 1573 aa24.08■■□□□ 1.45
CGGBP1-201ENST00000309534 TOP2BQ02880 1626 aa24.07■■□□□ 1.44
CGGBP1-201ENST00000309534 CEP162Q5TB80 1403 aa23.98■■□□□ 1.43
CGGBP1-201ENST00000309534 LAMC3Q9Y6N6 1575 aa23.97■■□□□ 1.43
CGGBP1-201ENST00000309534 CUX2O14529 1486 aa23.96■■□□□ 1.43
CGGBP1-201ENST00000309534 BIVM-ERCC5R4GMW8 1640 aa23.92■■□□□ 1.42
CGGBP1-201ENST00000309534 CUX1P39880 1505 aa23.91■■□□□ 1.42
CGGBP1-201ENST00000309534 RUSC2Q8N2Y8 1516 aa23.89■■□□□ 1.42
CGGBP1-201ENST00000309534 CLIP1P30622 1438 aa23.89■■□□□ 1.42
CGGBP1-201ENST00000309534 PRDM2Q13029 1718 aa23.86■■□□□ 1.41
CGGBP1-201ENST00000309534 FGD5Q6ZNL6 1462 aa23.85■■□□□ 1.41
CGGBP1-201ENST00000309534 TTBK1Q5TCY1 1321 aaPredicted RBP23.85■■□□□ 1.41
CGGBP1-201ENST00000309534 ERCC6Q03468 1493 aa23.83■■□□□ 1.41
CGGBP1-201ENST00000309534 KIF21BO75037 1637 aa23.83■■□□□ 1.41
CGGBP1-201ENST00000309534 NESP48681 1621 aa23.82■■□□□ 1.4
CGGBP1-201ENST00000309534 PPARGC1BQ86YN6 1023 aaKnown RBP23.8■■□□□ 1.4
CGGBP1-201ENST00000309534 DNMBPQ6XZF7 1577 aa23.8■■□□□ 1.4
CGGBP1-201ENST00000309534 CARMIL1Q5VZK9 1371 aa23.79■■□□□ 1.4
CGGBP1-201ENST00000309534 ZEB1P37275 1124 aaPredicted RBP23.78■■□□□ 1.4
CGGBP1-201ENST00000309534 TOPBP1Q92547 1522 aa23.74■■□□□ 1.39
CGGBP1-201ENST00000309534 ATP1B4Q9UN42 357 aaPredicted RBP23.73■■□□□ 1.39
CGGBP1-201ENST00000309534 ERICH3Q5RHP9 1530 aa23.72■■□□□ 1.39
CGGBP1-201ENST00000309534 RAPGEF2Q9Y4G8 1499 aa23.71■■□□□ 1.39
CGGBP1-201ENST00000309534 MRC2Q9UBG0 1479 aa23.62■■□□□ 1.37
CGGBP1-201ENST00000309534 IGF1RP08069 1367 aa23.62■■□□□ 1.37
CGGBP1-201ENST00000309534 PRXQ9BXM0 1461 aa23.62■■□□□ 1.37
CGGBP1-201ENST00000309534 POLA1P09884 1462 aaPredicted RBP23.62■■□□□ 1.37
CGGBP1-201ENST00000309534 HRCP23327 699 aa23.59■■□□□ 1.37
CGGBP1-201ENST00000309534 RAD54L2Q9Y4B4 1467 aa23.58■■□□□ 1.37
CGGBP1-201ENST00000309534 VPS8Q8N3P4 1428 aa23.58■■□□□ 1.37
CGGBP1-201ENST00000309534 ABCA10Q8WWZ4 1543 aa23.57■■□□□ 1.36
CGGBP1-201ENST00000309534 TDRD9Q8NDG6 1382 aaKnown RBP23.56■■□□□ 1.36
CGGBP1-201ENST00000309534 DNAJC5BQ9UF47 199 aa23.54■■□□□ 1.36
CGGBP1-201ENST00000309534 GAPVD1Q14C86 1478 aa23.51■■□□□ 1.35
CGGBP1-201ENST00000309534 CCER1Q8TC90 406 aaPredicted RBP23.51■■□□□ 1.35
CGGBP1-201ENST00000309534 URB2Q14146 1524 aaKnown RBP23.5■■□□□ 1.35
CGGBP1-201ENST00000309534 FHAD1B1AJZ9 1412 aa23.45■■□□□ 1.34
CGGBP1-201ENST00000309534 P3H3Q8IVL6 736 aa23.45■■□□□ 1.34
CGGBP1-201ENST00000309534 FBLN2P98095 1184 aa23.43■■□□□ 1.34
CGGBP1-201ENST00000309534 IFT140Q96RY7 1462 aa23.43■■□□□ 1.34
CGGBP1-201ENST00000309534 CHMP7Q8WUX9 453 aaPredicted RBP23.4■■□□□ 1.34
CGGBP1-201ENST00000309534 CUL7Q14999 1698 aa23.39■■□□□ 1.33
CGGBP1-201ENST00000309534 KIF21AQ7Z4S6 1674 aa23.34■■□□□ 1.33
CGGBP1-201ENST00000309534 GRIN2BQ13224 1484 aa23.33■■□□□ 1.33
CGGBP1-201ENST00000309534 HNRNPUL2Q1KMD3 747 aaKnown RBP23.33■■□□□ 1.32
CGGBP1-201ENST00000309534 FMN1Q68DA7 1419 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms