RNA–Protein interactions for RNA: ENST00000542075.5

SLC38A10-207, Transcript of solute carrier family 38 member 10, humanhuman

TSL 2

Gene SLC38A10, Length 2,903 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A10-207ENST00000542075 NISCHQ9Y2I1 1504 aa30.56■■■□□ 2.48
SLC38A10-207ENST00000542075 DCAF8L2P0C7V8 631 aa26.43■■□□□ 1.82
SLC38A10-207ENST00000542075 SHROOM4Q9ULL8 1493 aa26.08■■□□□ 1.77
SLC38A10-207ENST00000542075 CCDC180Q9P1Z9 1646 aa26.06■■□□□ 1.76
SLC38A10-207ENST00000542075 ZCCHC6Q5VYS8 1495 aaKnown RBP25.6■■□□□ 1.69
SLC38A10-207ENST00000542075 ABCC9O60706 1549 aa25.51■■□□□ 1.67
SLC38A10-207ENST00000542075 SUPT5HO00267 1087 aaKnown RBP25.23■■□□□ 1.63
SLC38A10-207ENST00000542075 DCAF1Q9Y4B6 1507 aa24.79■■□□□ 1.56
SLC38A10-207ENST00000542075 SCRIBQ14160 1630 aa24.74■■□□□ 1.55
SLC38A10-207ENST00000542075 NACADO15069 1562 aa24.46■■□□□ 1.51
SLC38A10-207ENST00000542075 PABPN1Q86U42 306 aaKnown RBP eCLIP24.45■■□□□ 1.5
SLC38A10-207ENST00000542075 MYO15BQ96JP2 1530 aa24.34■■□□□ 1.49
SLC38A10-207ENST00000542075 RB1CC1Q8TDY2 1594 aa24.32■■□□□ 1.48
SLC38A10-207ENST00000542075 CECR2Q9BXF3 1484 aa24.11■■□□□ 1.45
SLC38A10-207ENST00000542075 RSF1Q96T23 1441 aaPredicted RBP23.99■■□□□ 1.43
SLC38A10-207ENST00000542075 MROH2BQ7Z745 1585 aa23.83■■□□□ 1.41
SLC38A10-207ENST00000542075 CHIC1Q5VXU3 224 aa23.82■■□□□ 1.4
SLC38A10-207ENST00000542075 UNC13AQ9UPW8 1703 aa23.81■■□□□ 1.4
SLC38A10-207ENST00000542075 HRCP23327 699 aa23.73■■□□□ 1.39
SLC38A10-207ENST00000542075 BICRAQ9NZM4 1560 aa23.66■■□□□ 1.38
SLC38A10-207ENST00000542075 WIZO95785 1651 aa23.63■■□□□ 1.37
SLC38A10-207ENST00000542075 BAZ1AQ9NRL2 1556 aaPredicted RBP23.5■■□□□ 1.35
SLC38A10-207ENST00000542075 EHMT2Q96KQ7 1210 aa23.5■■□□□ 1.35
SLC38A10-207ENST00000542075 PCGF6Q9BYE7 350 aa23.46■■□□□ 1.35
SLC38A10-207ENST00000542075 FAM9AQ8IZU1 332 aaPredicted RBP23.45■■□□□ 1.34
SLC38A10-207ENST00000542075 PPARGC1BQ86YN6 1023 aaKnown RBP23.43■■□□□ 1.34
SLC38A10-207ENST00000542075 TRIM41Q8WV44 630 aa23.4■■□□□ 1.34
SLC38A10-207ENST00000542075 SMARCA4P51532 1647 aa23.4■■□□□ 1.34
SLC38A10-207ENST00000542075 LOC105371045A0A1W2PR82 267 aa23.33■■□□□ 1.33
SLC38A10-207ENST00000542075 CCDC88BA6NC98 1476 aa23.18■■□□□ 1.3
SLC38A10-207ENST00000542075 ATAD2BQ9ULI0 1458 aa23.12■■□□□ 1.29
SLC38A10-207ENST00000542075 TOP2AP11388 1531 aaKnown RBP23.1■■□□□ 1.29
SLC38A10-207ENST00000542075 BAZ1BQ9UIG0 1483 aaKnown RBP23.07■■□□□ 1.28
SLC38A10-207ENST00000542075 EIF4G1Q04637 1599 aaKnown RBP23.02■■□□□ 1.28
SLC38A10-207ENST00000542075 SMARCA2P51531 1590 aa22.99■■□□□ 1.27
SLC38A10-207ENST00000542075 ABCC8Q09428 1581 aa22.94■■□□□ 1.26
SLC38A10-207ENST00000542075 DNAJC5BQ9UF47 199 aa22.86■■□□□ 1.25
SLC38A10-207ENST00000542075 PEG3Q9GZU2 1588 aa22.8■■□□□ 1.24
SLC38A10-207ENST00000542075 NCAPD3P42695 1498 aa22.74■■□□□ 1.23
SLC38A10-207ENST00000542075 CC2D2AQ9P2K1 1620 aa22.71■■□□□ 1.23
SLC38A10-207ENST00000542075 SOGA1O94964 1423 aa22.62■■□□□ 1.21
SLC38A10-207ENST00000542075 RANGAP1P46060 587 aaPredicted RBP22.6■■□□□ 1.21
SLC38A10-207ENST00000542075 WRNQ14191 1432 aaPredicted RBP eCLIP22.6■■□□□ 1.218e-7■■□□□ 13.9
SLC38A10-207ENST00000542075 TRIM26Q12899 539 aaPredicted RBP22.59■■□□□ 1.21
SLC38A10-207ENST00000542075 PELP1Q8IZL8 1130 aaKnown RBP22.59■■□□□ 1.21
SLC38A10-207ENST00000542075 RUSC2Q8N2Y8 1516 aa22.55■■□□□ 1.2
SLC38A10-207ENST00000542075 HMGXB3Q12766 1538 aa22.53■■□□□ 1.2
SLC38A10-207ENST00000542075 UBTFP17480 764 aaKnown RBP22.51■■□□□ 1.19
SLC38A10-207ENST00000542075 TTBK1Q5TCY1 1321 aaPredicted RBP22.45■■□□□ 1.18
SLC38A10-207ENST00000542075 SCAF1Q9H7N4 1312 aaKnown RBP22.44■■□□□ 1.18
SLC38A10-207ENST00000542075 CSRNP3Q8WYN3 585 aa22.44■■□□□ 1.18
SLC38A10-207ENST00000542075 NESP48681 1621 aa22.42■■□□□ 1.18
SLC38A10-207ENST00000542075 SYNJ1O43426 1573 aa22.41■■□□□ 1.18
SLC38A10-207ENST00000542075 CADPSQ9ULU8 1353 aa22.4■■□□□ 1.18
SLC38A10-207ENST00000542075 CFTRP13569 1480 aa22.35■■□□□ 1.17
SLC38A10-207ENST00000542075 ZEB1P37275 1124 aaPredicted RBP22.28■■□□□ 1.16
SLC38A10-207ENST00000542075 CUX1P39880 1505 aa22.2■■□□□ 1.14
SLC38A10-207ENST00000542075 FANCD2Q9BXW9 1451 aa22.17■■□□□ 1.14
SLC38A10-207ENST00000542075 TOP2BQ02880 1626 aa22.09■■□□□ 1.13
SLC38A10-207ENST00000542075 RAPGEF2Q9Y4G8 1499 aa22.03■■□□□ 1.12
SLC38A10-207ENST00000542075 CEP162Q5TB80 1403 aa22.02■■□□□ 1.12
SLC38A10-207ENST00000542075 RAD54L2Q9Y4B4 1467 aa22.02■■□□□ 1.12
SLC38A10-207ENST00000542075 EEA1Q15075 1411 aa22.02■■□□□ 1.11
SLC38A10-207ENST00000542075 CUX2O14529 1486 aa22.02■■□□□ 1.11
SLC38A10-207ENST00000542075 FGD5Q6ZNL6 1462 aa22■■□□□ 1.11
SLC38A10-207ENST00000542075 GOLGA3Q08378 1498 aa21.97■■□□□ 1.11
SLC38A10-207ENST00000542075 KIF27Q86VH2 1401 aa21.97■■□□□ 1.11
SLC38A10-207ENST00000542075 TNIKQ9UKE5 1360 aa21.95■■□□□ 1.1
SLC38A10-207ENST00000542075 CEP164Q9UPV0 1460 aa21.94■■□□□ 1.1
SLC38A10-207ENST00000542075 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.94■■□□□ 1.1
SLC38A10-207ENST00000542075 TDRD9Q8NDG6 1382 aaKnown RBP21.94■■□□□ 1.1
SLC38A10-207ENST00000542075 PDS5BQ9NTI5 1447 aa21.92■■□□□ 1.1
SLC38A10-207ENST00000542075 BIVM-ERCC5R4GMW8 1640 aa21.91■■□□□ 1.1
SLC38A10-207ENST00000542075 NEUROD1Q13562 356 aa21.9■■□□□ 1.1
SLC38A10-207ENST00000542075 P3H3Q8IVL6 736 aa21.9■■□□□ 1.1
SLC38A10-207ENST00000542075 ACIN1Q9UKV3 1341 aaKnown RBP21.88■■□□□ 1.09
SLC38A10-207ENST00000542075 TOPBP1Q92547 1522 aa21.87■■□□□ 1.09
SLC38A10-207ENST00000542075 IGF1RP08069 1367 aa21.85■■□□□ 1.09
SLC38A10-207ENST00000542075 URB2Q14146 1524 aaKnown RBP21.85■■□□□ 1.09
SLC38A10-207ENST00000542075 POLA1P09884 1462 aaPredicted RBP21.84■■□□□ 1.09
SLC38A10-207ENST00000542075 CLIP1P30622 1438 aa21.83■■□□□ 1.08
SLC38A10-207ENST00000542075 LAMC3Q9Y6N6 1575 aa21.83■■□□□ 1.08
SLC38A10-207ENST00000542075 ATP1B4Q9UN42 357 aaPredicted RBP21.81■■□□□ 1.08
SLC38A10-207ENST00000542075 CCER1Q8TC90 406 aaPredicted RBP21.8■■□□□ 1.08
SLC38A10-207ENST00000542075 CARMIL1Q5VZK9 1371 aa21.79■■□□□ 1.08
SLC38A10-207ENST00000542075 GTF3C3Q9Y5Q9 886 aa21.78■■□□□ 1.08
SLC38A10-207ENST00000542075 ERCC6Q03468 1493 aa21.77■■□□□ 1.08
SLC38A10-207ENST00000542075 PRDM2Q13029 1718 aa21.76■■□□□ 1.07
SLC38A10-207ENST00000542075 KIF21AQ7Z4S6 1674 aa21.75■■□□□ 1.07
SLC38A10-207ENST00000542075 APLP2Q06481 763 aa21.75■■□□□ 1.07
SLC38A10-207ENST00000542075 MYT1Q01538 1121 aa21.75■■□□□ 1.07
SLC38A10-207ENST00000542075 PRXQ9BXM0 1461 aa21.73■■□□□ 1.07
SLC38A10-207ENST00000542075 DNMBPQ6XZF7 1577 aa21.73■■□□□ 1.07
SLC38A10-207ENST00000542075 KIF21BO75037 1637 aa21.69■■□□□ 1.06
SLC38A10-207ENST00000542075 AQRO60306 1485 aaKnown RBP eCLIP21.67■■□□□ 1.063e-6■■■□□ 17.2
SLC38A10-207ENST00000542075 FBLN2P98095 1184 aa21.67■■□□□ 1.06
SLC38A10-207ENST00000542075 DIEXFQ68CQ4 756 aaKnown RBP21.63■■□□□ 1.05
SLC38A10-207ENST00000542075 CENPBP07199 599 aaPredicted RBP21.61■■□□□ 1.05
SLC38A10-207ENST00000542075 ABCA10Q8WWZ4 1543 aa21.58■■□□□ 1.05
SLC38A10-207ENST00000542075 HNRNPUL2Q1KMD3 747 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms