RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 AEBP2Q6ZN18 517 aaPredicted RBP22.75■■□□□ 1.23
SRRM1-213ENST00000485441 CHIC1Q5VXU3 224 aa22.67■■□□□ 1.22
SRRM1-213ENST00000485441 PHF23Q9BUL5 403 aaPredicted RBP20.06■□□□□ 0.8
SRRM1-213ENST00000485441 SENP3Q9H4L4 574 aaPredicted RBP19.11■□□□□ 0.65
SRRM1-213ENST00000485441 PLPPR3Q6T4P5 718 aa18.57■□□□□ 0.56
SRRM1-213ENST00000485441 FOXD1Q16676 465 aa17.75■□□□□ 0.43
SRRM1-213ENST00000485441 PPP6R1Q9UPN7 881 aa17.53■□□□□ 0.4
SRRM1-213ENST00000485441 ADRA2BP18089 450 aa17.48■□□□□ 0.39
SRRM1-213ENST00000485441 PIAS4Q8N2W9 510 aaPredicted RBP16.76■□□□□ 0.27
SRRM1-213ENST00000485441 KCNA4P22459 653 aa16.67■□□□□ 0.26
SRRM1-213ENST00000485441 PPP4R3CPQ6ZMV5 832 aa16.46■□□□□ 0.23
SRRM1-213ENST00000485441 NCBP3Q53F19 620 aaKnown RBP16.09■□□□□ 0.17
SRRM1-213ENST00000485441 MSH5O43196 834 aa16.07■□□□□ 0.16
SRRM1-213ENST00000485441 EHMT2Q96KQ7 1210 aa15.98■□□□□ 0.15
SRRM1-213ENST00000485441 NPM3O75607 178 aaKnown RBP15.95■□□□□ 0.14
SRRM1-213ENST00000485441 SLC4A1APQ9BWU0 796 aaKnown RBP15.9■□□□□ 0.14
SRRM1-213ENST00000485441 SCAF1Q9H7N4 1312 aaKnown RBP15.89■□□□□ 0.13
SRRM1-213ENST00000485441 CNKSR2Q8WXI2 1034 aa15.87■□□□□ 0.13
SRRM1-213ENST00000485441 MAPK8IP2Q13387 824 aaPredicted RBP15.74■□□□□ 0.11
SRRM1-213ENST00000485441 CSRNP3Q8WYN3 585 aa15.72■□□□□ 0.11
SRRM1-213ENST00000485441 DNAJC5BQ9UF47 199 aa15.53■□□□□ 0.08
SRRM1-213ENST00000485441 RNF216Q9NWF9 866 aaPredicted RBP15.45■□□□□ 0.06
SRRM1-213ENST00000485441 ZBTB22O15209 634 aa15.4■□□□□ 0.06
SRRM1-213ENST00000485441 DMRT2Q9Y5R5 561 aa15.39■□□□□ 0.05
SRRM1-213ENST00000485441 HOXD11P31277 338 aaPredicted RBP15.3■□□□□ 0.04
SRRM1-213ENST00000485441 FOXD4L1Q9NU39 408 aa15.14■□□□□ 0.01
SRRM1-213ENST00000485441 SLC4A2P04920 1241 aa14.99□□□□□ -0.01
SRRM1-213ENST00000485441 POTEDQ86YR6 584 aa14.82□□□□□ -0.04
SRRM1-213ENST00000485441 MYCNP04198 464 aaPredicted RBP14.68□□□□□ -0.06
SRRM1-213ENST00000485441 ATXN8OSP0DMR3 200 aa14.61□□□□□ -0.07
SRRM1-213ENST00000485441 DCAF8L1A6NGE4 600 aa14.53□□□□□ -0.08
SRRM1-213ENST00000485441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.44□□□□□ -0.13e-7■■■■□ 19.6
SRRM1-213ENST00000485441 U3KPZ7 1027 aaPredicted RBP14.37□□□□□ -0.11
SRRM1-213ENST00000485441 ATF5Q9Y2D1 282 aaPredicted RBP14.34□□□□□ -0.11
SRRM1-213ENST00000485441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.25□□□□□ -0.13
SRRM1-213ENST00000485441 HNRNPUL2Q1KMD3 747 aaKnown RBP14.25□□□□□ -0.13
SRRM1-213ENST00000485441 SAMD1Q6SPF0 538 aaPredicted RBP14.25□□□□□ -0.13
SRRM1-213ENST00000485441 FKBP8Q14318 412 aa14.06□□□□□ -0.16
SRRM1-213ENST00000485441 ZNF219Q9P2Y4 722 aaPredicted RBP13.99□□□□□ -0.17
SRRM1-213ENST00000485441 APLP2Q06481 763 aa13.94□□□□□ -0.18
SRRM1-213ENST00000485441 RNF39Q9H2S5 420 aa13.89□□□□□ -0.19
SRRM1-213ENST00000485441 SPINK5Q9NQ38 1064 aaPredicted RBP13.81□□□□□ -0.2
SRRM1-213ENST00000485441 MKRN4PQ13434 485 aaPredicted RBP13.75□□□□□ -0.21
SRRM1-213ENST00000485441 RTN4Q9NQC3 1192 aaKnown RBP13.74□□□□□ -0.21
SRRM1-213ENST00000485441 C1QBPQ07021 282 aaKnown RBP13.72□□□□□ -0.21
SRRM1-213ENST00000485441 TRHP20396 242 aaPredicted RBP13.7□□□□□ -0.22
SRRM1-213ENST00000485441 AMER1Q5JTC6 1135 aaPredicted RBP13.69□□□□□ -0.22
SRRM1-213ENST00000485441 POLA2Q14181 598 aa13.65□□□□□ -0.22
SRRM1-213ENST00000485441 CAPN15O75808 1086 aa13.63□□□□□ -0.23
SRRM1-213ENST00000485441 SPDYE4A6NLX3 237 aa13.58□□□□□ -0.24
SRRM1-213ENST00000485441 PROM2Q8N271 834 aa13.56□□□□□ -0.24
SRRM1-213ENST00000485441 FBLN2P98095 1184 aa13.55□□□□□ -0.24
SRRM1-213ENST00000485441 ABCB7O75027 752 aa13.44□□□□□ -0.26
SRRM1-213ENST00000485441 DSG3P32926 999 aa13.4□□□□□ -0.26
SRRM1-213ENST00000485441 FBXO3Q9UK99 471 aa13.4□□□□□ -0.26
SRRM1-213ENST00000485441 ZBTB12Q9Y330 459 aaPredicted RBP13.4□□□□□ -0.26
SRRM1-213ENST00000485441 VASPP50552 380 aaPredicted RBP13.25□□□□□ -0.29
SRRM1-213ENST00000485441 SLC24A1O60721 1099 aa13.17□□□□□ -0.3
SRRM1-213ENST00000485441 IFNLR1Q8IU57 520 aaPredicted RBP13.17□□□□□ -0.3
SRRM1-213ENST00000485441 ZNF692Q9BU19 519 aaPredicted RBP13.14□□□□□ -0.31
SRRM1-213ENST00000485441 SSUH2Q9Y2M2 353 aa13.14□□□□□ -0.31
SRRM1-213ENST00000485441 SPDYE2BA6NHP3 402 aa13.13□□□□□ -0.31
SRRM1-213ENST00000485441 SPDYE6P0CI01 402 aa13.13□□□□□ -0.31
SRRM1-213ENST00000485441 SPDYE2Q495Y8 402 aa13.13□□□□□ -0.31
SRRM1-213ENST00000485441 OSCARQ8IYS5 282 aa13.13□□□□□ -0.31
SRRM1-213ENST00000485441 CACNB1Q02641 598 aaPredicted RBP13.07□□□□□ -0.32
SRRM1-213ENST00000485441 PABPN1Q86U42 306 aaKnown RBP eCLIP13□□□□□ -0.33
SRRM1-213ENST00000485441 STAG3Q9UJ98 1225 aa12.98□□□□□ -0.33
SRRM1-213ENST00000485441 PKD2Q13563 968 aa12.94□□□□□ -0.34
SRRM1-213ENST00000485441 SPOCK2Q92563 424 aa12.85□□□□□ -0.35
SRRM1-213ENST00000485441 KLHL34Q8N239 644 aa12.82□□□□□ -0.36
SRRM1-213ENST00000485441 MIER1Q8N108 512 aa12.8□□□□□ -0.36
SRRM1-213ENST00000485441 PLCD3Q8N3E9 789 aa12.79□□□□□ -0.36
SRRM1-213ENST00000485441 PLCB2Q00722 1185 aa12.69□□□□□ -0.38
SRRM1-213ENST00000485441 ECM2O94769 699 aaPredicted RBP12.66□□□□□ -0.38
SRRM1-213ENST00000485441 AKT1S1Q96B36 256 aa12.66□□□□□ -0.38
SRRM1-213ENST00000485441 RBM42Q9BTD8 480 aaKnown RBP12.65□□□□□ -0.38
SRRM1-213ENST00000485441 DCAF8L2P0C7V8 631 aa12.61□□□□□ -0.39
SRRM1-213ENST00000485441 ZBTB47Q9UFB7 747 aaPredicted RBP12.61□□□□□ -0.39
SRRM1-213ENST00000485441 SPDYE1Q8NFV5 336 aaPredicted RBP12.6□□□□□ -0.39
SRRM1-213ENST00000485441 PLEKHG5O94827 1062 aa12.59□□□□□ -0.39
SRRM1-213ENST00000485441 RGL2O15211 777 aa12.58□□□□□ -0.4
SRRM1-213ENST00000485441 NPM1P06748 294 aaKnown RBP eCLIP12.57□□□□□ -0.4
SRRM1-213ENST00000485441 REM2Q8IYK8 340 aaPredicted RBP12.56□□□□□ -0.4
SRRM1-213ENST00000485441 NUBP1P53384 320 aa12.52□□□□□ -0.41
SRRM1-213ENST00000485441 MNX1P50219 401 aaPredicted RBP12.51□□□□□ -0.41
SRRM1-213ENST00000485441 CREBZFQ9NS37 354 aa12.51□□□□□ -0.41
SRRM1-213ENST00000485441 CIZ1Q9ULV3 898 aaPredicted RBP12.51□□□□□ -0.41
SRRM1-213ENST00000485441 BBXQ8WY36 941 aaPredicted RBP12.5□□□□□ -0.41
SRRM1-213ENST00000485441 CLEC11AQ9Y240 323 aa12.47□□□□□ -0.41
SRRM1-213ENST00000485441 PRR29P0C7W0 189 aa12.46□□□□□ -0.41
SRRM1-213ENST00000485441 TRIM41Q8WV44 630 aa12.46□□□□□ -0.41
SRRM1-213ENST00000485441 HAP1P54257 671 aaPredicted RBP12.42□□□□□ -0.42
SRRM1-213ENST00000485441 GSE1Q14687 1217 aa12.42□□□□□ -0.42
SRRM1-213ENST00000485441 PITPNM1O00562 1244 aa12.39□□□□□ -0.43
SRRM1-213ENST00000485441 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.39□□□□□ -0.43
SRRM1-213ENST00000485441 RNF25Q96BH1 459 aaPredicted RBP12.38□□□□□ -0.43
SRRM1-213ENST00000485441 DCAF8Q5TAQ9 597 aa12.35□□□□□ -0.43
SRRM1-213ENST00000485441 PAXIP1Q6ZW49 1069 aaPredicted RBP12.34□□□□□ -0.43
SRRM1-213ENST00000485441 VSIG10Q8N0Z9 540 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms