Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CD3DP04234 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD3DP04234 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD3DP04234 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CD3DP04234 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD3DP04234 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD3DP04234 DUX4L11-201ENST00000611504 1267 ntBASIC19.56■□□□□ 0.72
CD3DP04234 DUX4L12-201ENST00000614593 1267 ntBASIC19.56■□□□□ 0.72
CD3DP04234 DUX4L14-201ENST00000621227 1267 ntBASIC19.56■□□□□ 0.72
CD3DP04234 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.56■□□□□ 0.72
CD3DP04234 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD3DP04234 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD3DP04234 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD3DP04234 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD3DP04234 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CD3DP04234 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CD3DP04234 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CD3DP04234 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
CD3DP04234 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD3DP04234 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD3DP04234 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD3DP04234 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD3DP04234 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD3DP04234 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.55■□□□□ 0.72
CD3DP04234 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CD3DP04234 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.55■□□□□ 0.72
CD3DP04234 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CD3DP04234 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CD3DP04234 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD3DP04234 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CD3DP04234 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD3DP04234 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
CD3DP04234 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.54■□□□□ 0.72
CD3DP04234 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CD3DP04234 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD3DP04234 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.54■□□□□ 0.72
CD3DP04234 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CD3DP04234 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.54■□□□□ 0.72
CD3DP04234 C1orf229-201ENST00000623686 2258 ntBASIC19.54■□□□□ 0.72
CD3DP04234 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CD3DP04234 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD3DP04234 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD3DP04234 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CD3DP04234 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD3DP04234 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.53■□□□□ 0.72
CD3DP04234 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CD3DP04234 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD3DP04234 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CD3DP04234 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CD3DP04234 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CD3DP04234 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD3DP04234 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD3DP04234 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD3DP04234 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD3DP04234 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD3DP04234 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CD3DP04234 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.52■□□□□ 0.72
CD3DP04234 ANOS2P-203ENST00000472227 1816 ntBASIC19.52■□□□□ 0.72
CD3DP04234 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CD3DP04234 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CD3DP04234 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.52■□□□□ 0.71
CD3DP04234 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CD3DP04234 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD3DP04234 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.51■□□□□ 0.71
CD3DP04234 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD3DP04234 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CD3DP04234 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.51■□□□□ 0.71
CD3DP04234 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD3DP04234 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD3DP04234 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD3DP04234 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CD3DP04234 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CD3DP04234 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD3DP04234 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.5■□□□□ 0.71
CD3DP04234 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD3DP04234 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD3DP04234 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.5■□□□□ 0.71
CD3DP04234 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CD3DP04234 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD3DP04234 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD3DP04234 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD3DP04234 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CD3DP04234 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.49■□□□□ 0.71
CD3DP04234 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CD3DP04234 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD3DP04234 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD3DP04234 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.49■□□□□ 0.71
CD3DP04234 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.49■□□□□ 0.71
CD3DP04234 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD3DP04234 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD3DP04234 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD3DP04234 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD3DP04234 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD3DP04234 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD3DP04234 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CD3DP04234 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CD3DP04234 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD3DP04234 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CD3DP04234 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.48■□□□□ 0.71
CD3DP04234 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms