Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC31.16■■■□□ 2.58
LTN1O94822 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
LTN1O94822 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC31.15■■■□□ 2.58
LTN1O94822 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
LTN1O94822 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
LTN1O94822 EDA-201ENST00000338901 1233 ntBASIC31.15■■■□□ 2.58
LTN1O94822 AL121749.1-202ENST00000609313 2153 ntBASIC31.14■■■□□ 2.58
LTN1O94822 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
LTN1O94822 SRD5A1P1-201ENST00000442297 786 ntBASIC31.14■■■□□ 2.58
LTN1O94822 AC005703.6-201ENST00000623265 1329 ntBASIC31.14■■■□□ 2.58
LTN1O94822 AC105265.2-201ENST00000467189 838 ntBASIC31.13■■■□□ 2.57
LTN1O94822 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
LTN1O94822 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
LTN1O94822 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
LTN1O94822 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC31.12■■■□□ 2.57
LTN1O94822 PTCHD3P2-201ENST00000424937 1205 ntBASIC31.12■■■□□ 2.57
LTN1O94822 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC31.12■■■□□ 2.57
LTN1O94822 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
LTN1O94822 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC31.12■■■□□ 2.57
LTN1O94822 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
LTN1O94822 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
LTN1O94822 AF213884.3-201ENST00000563833 479 ntBASIC31.11■■■□□ 2.57
LTN1O94822 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
LTN1O94822 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
LTN1O94822 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC31.1■■■□□ 2.57
LTN1O94822 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
LTN1O94822 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
LTN1O94822 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
LTN1O94822 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
LTN1O94822 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
LTN1O94822 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
LTN1O94822 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
LTN1O94822 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
LTN1O94822 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
LTN1O94822 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
LTN1O94822 MIR939-201ENST00000401314 82 ntBASIC31.09■■■□□ 2.57
LTN1O94822 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
LTN1O94822 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
LTN1O94822 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
LTN1O94822 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC31.08■■■□□ 2.57
LTN1O94822 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC31.08■■■□□ 2.57
LTN1O94822 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC31.08■■■□□ 2.57
LTN1O94822 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
LTN1O94822 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC31.08■■■□□ 2.57
LTN1O94822 GRAMD4P4-201ENST00000613563 1115 ntBASIC31.08■■■□□ 2.57
LTN1O94822 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC31.08■■■□□ 2.57
LTN1O94822 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC31.08■■■□□ 2.57
LTN1O94822 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
LTN1O94822 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
LTN1O94822 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC31.08■■■□□ 2.57
LTN1O94822 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
LTN1O94822 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC31.07■■■□□ 2.56
LTN1O94822 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
LTN1O94822 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC31.07■■■□□ 2.56
LTN1O94822 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
LTN1O94822 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
LTN1O94822 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC31.06■■■□□ 2.56
LTN1O94822 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
LTN1O94822 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
LTN1O94822 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
LTN1O94822 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
LTN1O94822 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
LTN1O94822 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
LTN1O94822 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
LTN1O94822 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC31.06■■■□□ 2.56
LTN1O94822 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC31.05■■■□□ 2.56
LTN1O94822 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
LTN1O94822 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
LTN1O94822 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
LTN1O94822 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
LTN1O94822 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
LTN1O94822 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
LTN1O94822 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
LTN1O94822 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
LTN1O94822 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC31.04■■■□□ 2.56
LTN1O94822 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
LTN1O94822 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC31.04■■■□□ 2.56
LTN1O94822 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC31.03■■■□□ 2.56
LTN1O94822 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
LTN1O94822 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC31.03■■■□□ 2.56
LTN1O94822 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
LTN1O94822 DUX4L19-201ENST00000557448 1267 ntBASIC31.03■■■□□ 2.56
LTN1O94822 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC31.03■■■□□ 2.56
LTN1O94822 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC31.03■■■□□ 2.56
LTN1O94822 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
LTN1O94822 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
LTN1O94822 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC31.02■■■□□ 2.56
LTN1O94822 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC31.02■■■□□ 2.56
LTN1O94822 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
LTN1O94822 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
LTN1O94822 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
LTN1O94822 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC31■■■□□ 2.55
LTN1O94822 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC31■■■□□ 2.55
LTN1O94822 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
LTN1O94822 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC31■■■□□ 2.55
LTN1O94822 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC31■■■□□ 2.55
LTN1O94822 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
LTN1O94822 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
LTN1O94822 C17orf82-201ENST00000623772 1530 ntBASIC30.99■■■□□ 2.55
LTN1O94822 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms