Protein–RNA interactions for Protein: A0A0K0K1B3

TRBV30, T-cell receptor beta variable 30 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV30A0A0K0K1B3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV30A0A0K0K1B3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV30A0A0K0K1B3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRBV30A0A0K0K1B3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
TRBV30A0A0K0K1B3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRBV30A0A0K0K1B3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV30A0A0K0K1B3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV30A0A0K0K1B3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV30A0A0K0K1B3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV30A0A0K0K1B3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV30A0A0K0K1B3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV30A0A0K0K1B3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC15.62■□□□□ 0.09
TRBV30A0A0K0K1B3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRBV30A0A0K0K1B3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV30A0A0K0K1B3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV30A0A0K0K1B3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV30A0A0K0K1B3 SLC25A24-204ENST00000569674 2357 ntBASIC15.61■□□□□ 0.09
TRBV30A0A0K0K1B3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV30A0A0K0K1B3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV30A0A0K0K1B3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV30A0A0K0K1B3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV30A0A0K0K1B3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV30A0A0K0K1B3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV30A0A0K0K1B3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV30A0A0K0K1B3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV30A0A0K0K1B3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV30A0A0K0K1B3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC15.61■□□□□ 0.09
TRBV30A0A0K0K1B3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV30A0A0K0K1B3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV30A0A0K0K1B3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV30A0A0K0K1B3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV30A0A0K0K1B3 AC127496.7-201ENST00000625110 1798 ntBASIC15.6■□□□□ 0.09
TRBV30A0A0K0K1B3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV30A0A0K0K1B3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV30A0A0K0K1B3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV30A0A0K0K1B3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC15.6■□□□□ 0.09
TRBV30A0A0K0K1B3 AC025884.2-201ENST00000553429 711 ntBASIC15.6■□□□□ 0.09
TRBV30A0A0K0K1B3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV30A0A0K0K1B3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRBV30A0A0K0K1B3 ABCB10P4-201ENST00000566803 2184 ntBASIC15.6■□□□□ 0.09
TRBV30A0A0K0K1B3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.6■□□□□ 0.09
TRBV30A0A0K0K1B3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV30A0A0K0K1B3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV30A0A0K0K1B3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV30A0A0K0K1B3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 REST-210ENST00000638187 1334 ntTSL 5 BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC15.59■□□□□ 0.09
TRBV30A0A0K0K1B3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRBV30A0A0K0K1B3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC15.58■□□□□ 0.09
TRBV30A0A0K0K1B3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRBV30A0A0K0K1B3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
TRBV30A0A0K0K1B3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV30A0A0K0K1B3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV30A0A0K0K1B3 AL157400.5-201ENST00000507624 621 ntBASIC15.58■□□□□ 0.08
TRBV30A0A0K0K1B3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC15.58■□□□□ 0.08
TRBV30A0A0K0K1B3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV30A0A0K0K1B3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRBV30A0A0K0K1B3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV30A0A0K0K1B3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV30A0A0K0K1B3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
TRBV30A0A0K0K1B3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRBV30A0A0K0K1B3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRBV30A0A0K0K1B3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV30A0A0K0K1B3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TRBV30A0A0K0K1B3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV30A0A0K0K1B3 AC060814.1-201ENST00000554326 538 ntBASIC15.57■□□□□ 0.08
TRBV30A0A0K0K1B3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV30A0A0K0K1B3 SMPD5-203ENST00000639008 1464 ntBASIC15.57■□□□□ 0.08
TRBV30A0A0K0K1B3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRBV30A0A0K0K1B3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRBV30A0A0K0K1B3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV30A0A0K0K1B3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV30A0A0K0K1B3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC15.57■□□□□ 0.08
TRBV30A0A0K0K1B3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV30A0A0K0K1B3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV30A0A0K0K1B3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV30A0A0K0K1B3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
TRBV30A0A0K0K1B3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC15.56■□□□□ 0.08
TRBV30A0A0K0K1B3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms