Protein–RNA interactions for Protein: A0A075B6U6

TRAV8-7, T-cell receptor alpha variable 8-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-7A0A075B6U6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TRAV8-7A0A075B6U6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV8-7A0A075B6U6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TRAV8-7A0A075B6U6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAV8-7A0A075B6U6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
TRAV8-7A0A075B6U6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV8-7A0A075B6U6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV8-7A0A075B6U6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAV8-7A0A075B6U6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV8-7A0A075B6U6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV8-7A0A075B6U6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV8-7A0A075B6U6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.05■□□□□ 0.8
TRAV8-7A0A075B6U6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
TRAV8-7A0A075B6U6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV8-7A0A075B6U6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV8-7A0A075B6U6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TRAV8-7A0A075B6U6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV8-7A0A075B6U6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV8-7A0A075B6U6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV8-7A0A075B6U6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV8-7A0A075B6U6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRAV8-7A0A075B6U6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV8-7A0A075B6U6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV8-7A0A075B6U6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV8-7A0A075B6U6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV8-7A0A075B6U6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRAV8-7A0A075B6U6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV8-7A0A075B6U6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAV8-7A0A075B6U6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV8-7A0A075B6U6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TRAV8-7A0A075B6U6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV8-7A0A075B6U6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAV8-7A0A075B6U6 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.03■□□□□ 0.8
TRAV8-7A0A075B6U6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.03■□□□□ 0.8
TRAV8-7A0A075B6U6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.03■□□□□ 0.8
TRAV8-7A0A075B6U6 AC026202.3-201ENST00000600805 1127 ntBASIC20.03■□□□□ 0.8
TRAV8-7A0A075B6U6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.03■□□□□ 0.8
TRAV8-7A0A075B6U6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV8-7A0A075B6U6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV8-7A0A075B6U6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV8-7A0A075B6U6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV8-7A0A075B6U6 MIR639-201ENST00000384974 98 ntBASIC20.02■□□□□ 0.8
TRAV8-7A0A075B6U6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAV8-7A0A075B6U6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.02■□□□□ 0.8
TRAV8-7A0A075B6U6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV8-7A0A075B6U6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRAV8-7A0A075B6U6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.02■□□□□ 0.79
TRAV8-7A0A075B6U6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRAV8-7A0A075B6U6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
TRAV8-7A0A075B6U6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
TRAV8-7A0A075B6U6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV8-7A0A075B6U6 KRT18P10-201ENST00000388836 1287 ntBASIC20.01■□□□□ 0.79
TRAV8-7A0A075B6U6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.01■□□□□ 0.79
TRAV8-7A0A075B6U6 MIR7108-201ENST00000614319 87 ntBASIC20.01■□□□□ 0.79
TRAV8-7A0A075B6U6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV8-7A0A075B6U6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV8-7A0A075B6U6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV8-7A0A075B6U6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV8-7A0A075B6U6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAV8-7A0A075B6U6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRAV8-7A0A075B6U6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV8-7A0A075B6U6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20■□□□□ 0.79
TRAV8-7A0A075B6U6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV8-7A0A075B6U6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV8-7A0A075B6U6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20■□□□□ 0.79
TRAV8-7A0A075B6U6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV8-7A0A075B6U6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV8-7A0A075B6U6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV8-7A0A075B6U6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV8-7A0A075B6U6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV8-7A0A075B6U6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV8-7A0A075B6U6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV8-7A0A075B6U6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV8-7A0A075B6U6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV8-7A0A075B6U6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV8-7A0A075B6U6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV8-7A0A075B6U6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV8-7A0A075B6U6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV8-7A0A075B6U6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV8-7A0A075B6U6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.99■□□□□ 0.79
TRAV8-7A0A075B6U6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.98■□□□□ 0.79
TRAV8-7A0A075B6U6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV8-7A0A075B6U6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV8-7A0A075B6U6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV8-7A0A075B6U6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV8-7A0A075B6U6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV8-7A0A075B6U6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV8-7A0A075B6U6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV8-7A0A075B6U6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV8-7A0A075B6U6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV8-7A0A075B6U6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
TRAV8-7A0A075B6U6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV8-7A0A075B6U6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TRAV8-7A0A075B6U6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.97■□□□□ 0.79
TRAV8-7A0A075B6U6 ANOS2P-203ENST00000472227 1816 ntBASIC19.97■□□□□ 0.79
TRAV8-7A0A075B6U6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV8-7A0A075B6U6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV8-7A0A075B6U6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV8-7A0A075B6U6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV8-7A0A075B6U6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms