Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CYSTM1Q9H1C7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CYSTM1Q9H1C7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CYSTM1Q9H1C7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CYSTM1Q9H1C7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CYSTM1Q9H1C7 GUSBP5-202ENST00000510805 1989 ntBASIC13.76□□□□□ -0.21
CYSTM1Q9H1C7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CYSTM1Q9H1C7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CYSTM1Q9H1C7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CYSTM1Q9H1C7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CYSTM1Q9H1C7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC13.75□□□□□ -0.21
CYSTM1Q9H1C7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CYSTM1Q9H1C7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CYSTM1Q9H1C7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CYSTM1Q9H1C7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CYSTM1Q9H1C7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CYSTM1Q9H1C7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CYSTM1Q9H1C7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CYSTM1Q9H1C7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CYSTM1Q9H1C7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CYSTM1Q9H1C7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC13.74□□□□□ -0.21
CYSTM1Q9H1C7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CYSTM1Q9H1C7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CYSTM1Q9H1C7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CYSTM1Q9H1C7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CYSTM1Q9H1C7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CYSTM1Q9H1C7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CYSTM1Q9H1C7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CYSTM1Q9H1C7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CYSTM1Q9H1C7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CYSTM1Q9H1C7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC13.73□□□□□ -0.21
CYSTM1Q9H1C7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CYSTM1Q9H1C7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CYSTM1Q9H1C7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CYSTM1Q9H1C7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CYSTM1Q9H1C7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CYSTM1Q9H1C7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC13.73□□□□□ -0.21
CYSTM1Q9H1C7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CYSTM1Q9H1C7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CYSTM1Q9H1C7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CYSTM1Q9H1C7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CYSTM1Q9H1C7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CYSTM1Q9H1C7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
CYSTM1Q9H1C7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC13.72□□□□□ -0.21
CYSTM1Q9H1C7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CYSTM1Q9H1C7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CYSTM1Q9H1C7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CYSTM1Q9H1C7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CYSTM1Q9H1C7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CYSTM1Q9H1C7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CYSTM1Q9H1C7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
CYSTM1Q9H1C7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CYSTM1Q9H1C7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.71□□□□□ -0.21
CYSTM1Q9H1C7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC13.71□□□□□ -0.21
CYSTM1Q9H1C7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CYSTM1Q9H1C7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CYSTM1Q9H1C7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CYSTM1Q9H1C7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CYSTM1Q9H1C7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CYSTM1Q9H1C7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CYSTM1Q9H1C7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CYSTM1Q9H1C7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
CYSTM1Q9H1C7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CYSTM1Q9H1C7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CYSTM1Q9H1C7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC13.7□□□□□ -0.22
CYSTM1Q9H1C7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CYSTM1Q9H1C7 ECEL1P1-201ENST00000373592 1742 ntBASIC13.7□□□□□ -0.22
CYSTM1Q9H1C7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CYSTM1Q9H1C7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CYSTM1Q9H1C7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CYSTM1Q9H1C7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CYSTM1Q9H1C7 AC026310.3-201ENST00000625186 2373 ntBASIC13.7□□□□□ -0.22
CYSTM1Q9H1C7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CYSTM1Q9H1C7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CYSTM1Q9H1C7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CYSTM1Q9H1C7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC13.7□□□□□ -0.22
CYSTM1Q9H1C7 AP004609.3-201ENST00000610705 1884 ntBASIC13.7□□□□□ -0.22
CYSTM1Q9H1C7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CYSTM1Q9H1C7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC13.69□□□□□ -0.22
CYSTM1Q9H1C7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CYSTM1Q9H1C7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CYSTM1Q9H1C7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CYSTM1Q9H1C7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC13.69□□□□□ -0.22
CYSTM1Q9H1C7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC13.69□□□□□ -0.22
CYSTM1Q9H1C7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CYSTM1Q9H1C7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC13.69□□□□□ -0.22
CYSTM1Q9H1C7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CYSTM1Q9H1C7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
CYSTM1Q9H1C7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC13.69□□□□□ -0.22
CYSTM1Q9H1C7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CYSTM1Q9H1C7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CYSTM1Q9H1C7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CYSTM1Q9H1C7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CYSTM1Q9H1C7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CYSTM1Q9H1C7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC13.68□□□□□ -0.22
CYSTM1Q9H1C7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CYSTM1Q9H1C7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CYSTM1Q9H1C7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CYSTM1Q9H1C7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC13.68□□□□□ -0.22
CYSTM1Q9H1C7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms