RNA–Protein interactions for RNA: ENST00000331320.11

MTA1-201, Transcript of metastasis associated 1, humanhuman

TSL 1 (best) BASIC

Gene MTA1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-201ENST00000331320 PELP1Q8IZL8 1130 aaKnown RBP31.44■■■□□ 2.62
MTA1-201ENST00000331320 MYT1Q01538 1121 aa30.67■■■□□ 2.5
MTA1-201ENST00000331320 HRCP23327 699 aa30.6■■■□□ 2.49
MTA1-201ENST00000331320 NISCHQ9Y2I1 1504 aa30.56■■■□□ 2.48
MTA1-201ENST00000331320 PPARGC1BQ86YN6 1023 aaKnown RBP29.64■■■□□ 2.34
MTA1-201ENST00000331320 SCAF1Q9H7N4 1312 aaKnown RBP29.47■■■□□ 2.31
MTA1-201ENST00000331320 PCGF6Q9BYE7 350 aa29.23■■■□□ 2.27
MTA1-201ENST00000331320 TTBK1Q5TCY1 1321 aaPredicted RBP29.18■■■□□ 2.26
MTA1-201ENST00000331320 MYO15BQ96JP2 1530 aa28.69■■■□□ 2.18
MTA1-201ENST00000331320 ACIN1Q9UKV3 1341 aaKnown RBP28.5■■■□□ 2.15
MTA1-201ENST00000331320 ZEB1P37275 1124 aaPredicted RBP28.49■■■□□ 2.15
MTA1-201ENST00000331320 DCAF1Q9Y4B6 1507 aa28.42■■■□□ 2.14
MTA1-201ENST00000331320 CCDC180Q9P1Z9 1646 aa28.3■■■□□ 2.12
MTA1-201ENST00000331320 NEUROD1Q13562 356 aa28.25■■■□□ 2.11
MTA1-201ENST00000331320 GTF3C3Q9Y5Q9 886 aa28.23■■■□□ 2.11
MTA1-201ENST00000331320 TRIM26Q12899 539 aaPredicted RBP28.2■■■□□ 2.1
MTA1-201ENST00000331320 BCL11AQ9H165 835 aa28.19■■■□□ 2.1
MTA1-201ENST00000331320 CENPBP07199 599 aaPredicted RBP28.13■■■□□ 2.09
MTA1-201ENST00000331320 CHIC1Q5VXU3 224 aa28.04■■■□□ 2.08
MTA1-201ENST00000331320 PRKCSHP14314 528 aaPredicted RBP27.95■■■□□ 2.06
MTA1-201ENST00000331320 SUPT5HO00267 1087 aaKnown RBP27.93■■■□□ 2.06
MTA1-201ENST00000331320 FAM9AQ8IZU1 332 aaPredicted RBP27.89■■■□□ 2.05
MTA1-201ENST00000331320 ERICH6Q7L0X2 663 aa27.55■■■□□ 2
MTA1-201ENST00000331320 ANP32EQ9BTT0 268 aa27.54■■■□□ 2
MTA1-201ENST00000331320 SHROOM4Q9ULL8 1493 aa27.54■■■□□ 2
MTA1-201ENST00000331320 DIEXFQ68CQ4 756 aaKnown RBP27.35■■□□□ 1.97
MTA1-201ENST00000331320 LOC105371045A0A1W2PR82 267 aa27.35■■□□□ 1.97
MTA1-201ENST00000331320 APLP2Q06481 763 aa27.24■■□□□ 1.95
MTA1-201ENST00000331320 CSRNP3Q8WYN3 585 aa27.15■■□□□ 1.94
MTA1-201ENST00000331320 CLSPNQ9HAW4 1339 aa26.87■■□□□ 1.89
MTA1-201ENST00000331320 TRIM41Q8WV44 630 aa26.87■■□□□ 1.89
MTA1-201ENST00000331320 YTHDC1Q96MU7 727 aaKnown RBP26.85■■□□□ 1.89
MTA1-201ENST00000331320 TSHZ2Q9NRE2 1034 aa26.84■■□□□ 1.89
MTA1-201ENST00000331320 CCER1Q8TC90 406 aaPredicted RBP26.76■■□□□ 1.87
MTA1-201ENST00000331320 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.67■■□□□ 1.86
MTA1-201ENST00000331320 SUPT16HQ9Y5B9 1047 aaKnown RBP26.65■■□□□ 1.86
MTA1-201ENST00000331320 ZNF316A6NFI3 1004 aaPredicted RBP26.61■■□□□ 1.85
MTA1-201ENST00000331320 MIER1Q8N108 512 aa26.48■■□□□ 1.83
MTA1-201ENST00000331320 ANO8Q9HCE9 1232 aaPredicted RBP26.23■■□□□ 1.79
MTA1-201ENST00000331320 MYT1LQ9UL68 1186 aa26.17■■□□□ 1.78
MTA1-201ENST00000331320 ZCCHC6Q5VYS8 1495 aaKnown RBP26.11■■□□□ 1.77
MTA1-201ENST00000331320 RBM19Q9Y4C8 960 aaKnown RBP26.1■■□□□ 1.77
MTA1-201ENST00000331320 UBE2Q2Q8WVN8 375 aa26.04■■□□□ 1.76
MTA1-201ENST00000331320 ERICH6BQ5W0A0 696 aa25.95■■□□□ 1.75
MTA1-201ENST00000331320 MSH5O43196 834 aa25.94■■□□□ 1.74
MTA1-201ENST00000331320 DEKP35659 375 aaKnown RBP25.87■■□□□ 1.73
MTA1-201ENST00000331320 SALL2Q9Y467 1007 aaPredicted RBP25.84■■□□□ 1.73
MTA1-201ENST00000331320 FANCIQ9NVI1 1328 aa25.8■■□□□ 1.72
MTA1-201ENST00000331320 BCANQ96GW7 911 aa25.74■■□□□ 1.71
MTA1-201ENST00000331320 FKBP8Q14318 412 aa25.65■■□□□ 1.7
MTA1-201ENST00000331320 EIF5BO60841 1220 aaKnown RBP25.62■■□□□ 1.69
MTA1-201ENST00000331320 CCDC136Q96JN2 1154 aa25.61■■□□□ 1.69
MTA1-201ENST00000331320 EHMT2Q96KQ7 1210 aa25.54■■□□□ 1.68
MTA1-201ENST00000331320 SLC24A1O60721 1099 aa25.52■■□□□ 1.68
MTA1-201ENST00000331320 NEFLP07196 543 aa25.48■■□□□ 1.67
MTA1-201ENST00000331320 WRNQ14191 1432 aaPredicted RBP eCLIP25.47■■□□□ 1.679e-6■■■■■ 50.1
MTA1-201ENST00000331320 ITGAEP38570 1179 aa25.35■■□□□ 1.65
MTA1-201ENST00000331320 PKNOX2Q96KN3 472 aa25.34■■□□□ 1.65
MTA1-201ENST00000331320 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.33■■□□□ 1.64
MTA1-201ENST00000331320 CDK11AQ9UQ88 783 aaPredicted RBP25.28■■□□□ 1.64
MTA1-201ENST00000331320 DCAF8L2P0C7V8 631 aa25.23■■□□□ 1.63
MTA1-201ENST00000331320 IL27Q8NEV9 243 aa25.23■■□□□ 1.63
MTA1-201ENST00000331320 DAXXQ9UER7 740 aaPredicted RBP25.19■■□□□ 1.62
MTA1-201ENST00000331320 NBR1Q14596 966 aa25.14■■□□□ 1.62
MTA1-201ENST00000331320 RTN4Q9NQC3 1192 aaKnown RBP25.12■■□□□ 1.61
MTA1-201ENST00000331320 NOP58Q9Y2X3 529 aaKnown RBP25.12■■□□□ 1.61
MTA1-201ENST00000331320 KCNH8Q96L42 1107 aa25.12■■□□□ 1.61
MTA1-201ENST00000331320 RTL5Q5HYW3 569 aaPredicted RBP25.06■■□□□ 1.6
MTA1-201ENST00000331320 ABCC9O60706 1549 aa25.05■■□□□ 1.6
MTA1-201ENST00000331320 HNRNPUL2Q1KMD3 747 aaKnown RBP24.99■■□□□ 1.59
MTA1-201ENST00000331320 CEP162Q5TB80 1403 aa24.97■■□□□ 1.59
MTA1-201ENST00000331320 RB1CC1Q8TDY2 1594 aa24.94■■□□□ 1.58
MTA1-201ENST00000331320 PODXL2Q9NZ53 605 aa24.92■■□□□ 1.58
MTA1-201ENST00000331320 PLEKHG5O94827 1062 aa24.91■■□□□ 1.58
MTA1-201ENST00000331320 PAK3O75914 559 aaPredicted RBP24.9■■□□□ 1.58
MTA1-201ENST00000331320 C11orf95C9JLR9 678 aaPredicted RBP24.89■■□□□ 1.57
MTA1-201ENST00000331320 RSF1Q96T23 1441 aaPredicted RBP24.87■■□□□ 1.57
MTA1-201ENST00000331320 WASHC2AQ641Q2 1341 aa24.8■■□□□ 1.56
MTA1-201ENST00000331320 GLIPR1L2Q4G1C9 344 aa24.8■■□□□ 1.56
MTA1-201ENST00000331320 TNIKQ9UKE5 1360 aa24.77■■□□□ 1.56
MTA1-201ENST00000331320 DHX57Q6P158 1386 aaKnown RBP24.76■■□□□ 1.55
MTA1-201ENST00000331320 TRIM52Q96A61 297 aa24.76■■□□□ 1.55
MTA1-201ENST00000331320 CCER2I3L3R5 266 aa24.74■■□□□ 1.55
MTA1-201ENST00000331320 RSPH6AQ9H0K4 717 aa24.73■■□□□ 1.55
MTA1-201ENST00000331320 WASHC2CQ9Y4E1 1318 aa24.73■■□□□ 1.55
MTA1-201ENST00000331320 PPP4R2Q9NY27 417 aa24.72■■□□□ 1.55
MTA1-201ENST00000331320 IPO9Q96P70 1041 aaKnown RBP24.69■■□□□ 1.54
MTA1-201ENST00000331320 USP35Q9P2H5 1018 aa24.65■■□□□ 1.54
MTA1-201ENST00000331320 ZBTB47Q9UFB7 747 aaPredicted RBP24.65■■□□□ 1.54
MTA1-201ENST00000331320 ANP32AP39687 249 aaKnown RBP24.64■■□□□ 1.53
MTA1-201ENST00000331320 ZMYND15Q9H091 742 aa24.61■■□□□ 1.53
MTA1-201ENST00000331320 NACADO15069 1562 aa24.6■■□□□ 1.53
MTA1-201ENST00000331320 IRX6P78412 446 aaPredicted RBP24.59■■□□□ 1.53
MTA1-201ENST00000331320 DDX10Q13206 875 aaKnown RBP24.54■■□□□ 1.52
MTA1-201ENST00000331320 TIMELESSQ9UNS1 1208 aa24.54■■□□□ 1.52
MTA1-201ENST00000331320 BRPF3Q9ULD4 1205 aa24.52■■□□□ 1.52
MTA1-201ENST00000331320 VSIG10Q8N0Z9 540 aa24.5■■□□□ 1.51
MTA1-201ENST00000331320 EEA1Q15075 1411 aa24.49■■□□□ 1.51
MTA1-201ENST00000331320 ANP32CO43423 234 aa24.48■■□□□ 1.51
MTA1-201ENST00000331320 PPP1R15AO75807 674 aaPredicted RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms